RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 ISM1B1AKI9 464 aa14.22□□□□□ -0.13
DDX56-201ENST00000258772 SOCS6O14544 535 aa14.22□□□□□ -0.13
DDX56-201ENST00000258772 SCAMP1O15126 338 aa14.22□□□□□ -0.13
DDX56-201ENST00000258772 KCNJ13O60928 360 aa14.22□□□□□ -0.13
DDX56-201ENST00000258772 NDUFV2P19404 249 aa14.22□□□□□ -0.13
DDX56-201ENST00000258772 C5AR1P21730 350 aa14.22□□□□□ -0.13
DDX56-201ENST00000258772 CPN2P22792 545 aa14.22□□□□□ -0.13
DDX56-201ENST00000258772 PTBP1P26599 531 aaKnown RBP eCLIP14.22□□□□□ -0.13
DDX56-201ENST00000258772 HLA-DMAP28067 261 aa14.22□□□□□ -0.13
DDX56-201ENST00000258772 MLLT3P42568 568 aaPredicted RBP14.22□□□□□ -0.13
DDX56-201ENST00000258772 SGCGQ13326 291 aa14.22□□□□□ -0.13
DDX56-201ENST00000258772 IL18Q14116 193 aa14.22□□□□□ -0.13
DDX56-201ENST00000258772 TJAP1Q5JTD0 557 aa14.22□□□□□ -0.13
DDX56-201ENST00000258772 EOGTQ5NDL2 527 aa14.22□□□□□ -0.13
DDX56-201ENST00000258772 MFSD12Q6NUT3 480 aa14.22□□□□□ -0.13
DDX56-201ENST00000258772 ZNF322Q6U7Q0 402 aaPredicted RBP14.22□□□□□ -0.13
DDX56-201ENST00000258772 MTSS1LQ765P7 747 aa14.22□□□□□ -0.13
DDX56-201ENST00000258772 NOXA1Q86UR1 476 aa14.22□□□□□ -0.13
DDX56-201ENST00000258772 KLBQ86Z14 1044 aa14.22□□□□□ -0.13
DDX56-201ENST00000258772 PEX5LQ8IYB4 626 aa14.22□□□□□ -0.13
DDX56-201ENST00000258772 CDS1Q92903 461 aa14.22□□□□□ -0.13
DDX56-201ENST00000258772 COL26A1Q96A83 441 aa14.22□□□□□ -0.13
DDX56-201ENST00000258772 SAMD8Q96LT4 415 aa14.22□□□□□ -0.13
DDX56-201ENST00000258772 TMEM246Q9BRR3 403 aa14.22□□□□□ -0.13
DDX56-201ENST00000258772 RBFOX1Q9NWB1 397 aaKnown RBP14.22□□□□□ -0.13
DDX56-201ENST00000258772 SLC7A7Q9UM01 511 aa14.22□□□□□ -0.13
DDX56-201ENST00000258772 CD8B2A6NJW9 211 aa14.21□□□□□ -0.13
DDX56-201ENST00000258772 RNGTTO60942 597 aaKnown RBP14.21□□□□□ -0.13
DDX56-201ENST00000258772 ADH1BP00325 375 aa14.21□□□□□ -0.13
DDX56-201ENST00000258772 CD8BP10966 210 aa14.21□□□□□ -0.13
DDX56-201ENST00000258772 RUNX3Q13761 415 aa14.21□□□□□ -0.13
DDX56-201ENST00000258772 TANGO2Q6ICL3 276 aa14.21□□□□□ -0.13
DDX56-201ENST00000258772 CDC73Q6P1J9 531 aa14.21□□□□□ -0.13
DDX56-201ENST00000258772 TMEM91Q6ZNR0 172 aa14.21□□□□□ -0.13
DDX56-201ENST00000258772 ABI3BPQ7Z7G0 1075 aa14.21□□□□□ -0.13
DDX56-201ENST00000258772 SIMC1Q8NDZ2 872 aa14.21□□□□□ -0.13
DDX56-201ENST00000258772 TOR1AIP2Q8NFQ8 470 aa14.21□□□□□ -0.13
DDX56-201ENST00000258772 GANCQ8TET4 914 aa14.21□□□□□ -0.13
DDX56-201ENST00000258772 ZC3HAV1LQ96H79 300 aaKnown RBP14.21□□□□□ -0.13
DDX56-201ENST00000258772 JAM3Q9BX67 310 aa14.21□□□□□ -0.13
DDX56-201ENST00000258772 C1QTNF2Q9BXJ5 285 aa14.21□□□□□ -0.13
DDX56-201ENST00000258772 BEX2Q9BXY8 128 aa14.21□□□□□ -0.13
DDX56-201ENST00000258772 UBQLN3Q9H347 655 aa14.21□□□□□ -0.13
DDX56-201ENST00000258772 B3GAT2Q9NPZ5 323 aa14.21□□□□□ -0.13
DDX56-201ENST00000258772 PLSCR3Q9NRY6 295 aa14.21□□□□□ -0.13
DDX56-201ENST00000258772 NTMQ9P121 344 aa14.21□□□□□ -0.13
DDX56-201ENST00000258772 TBC1D3KA0A087X1G2 549 aa14.21□□□□□ -0.13
DDX56-201ENST00000258772 TBC1D3FA6NER0 549 aaPredicted RBP14.21□□□□□ -0.13
DDX56-201ENST00000258772 FAM183AA6NL82 134 aa14.21□□□□□ -0.13
DDX56-201ENST00000258772 J3QRE1 110 aa14.21□□□□□ -0.13
DDX56-201ENST00000258772 YES1P07947 543 aa14.21□□□□□ -0.13
DDX56-201ENST00000258772 PTNP21246 168 aa14.21□□□□□ -0.13
DDX56-201ENST00000258772 HTRA3P83110 453 aa14.21□□□□□ -0.13
DDX56-201ENST00000258772 RIN1Q13671 783 aa14.21□□□□□ -0.13
DDX56-201ENST00000258772 TMEM240Q5SV17 173 aa14.21□□□□□ -0.13
DDX56-201ENST00000258772 C1QTNF12Q5T7M4 302 aa14.21□□□□□ -0.13
DDX56-201ENST00000258772 TBC1D3GQ6DHY5 549 aa14.21□□□□□ -0.13
DDX56-201ENST00000258772 MZT2AQ6P582 158 aa14.21□□□□□ -0.13
DDX56-201ENST00000258772 PSRC1Q6PGN9 363 aaPredicted RBP14.21□□□□□ -0.13
DDX56-201ENST00000258772 DGLUCYQ7Z3D6 616 aa14.21□□□□□ -0.13
DDX56-201ENST00000258772 VN1R4Q7Z5H5 301 aa14.21□□□□□ -0.13
DDX56-201ENST00000258772 ADGRD2Q7Z7M1 963 aa14.21□□□□□ -0.13
DDX56-201ENST00000258772 LRRC25Q8N386 305 aaPredicted RBP14.21□□□□□ -0.13
DDX56-201ENST00000258772 SIRT6Q8N6T7 355 aa14.21□□□□□ -0.13
DDX56-201ENST00000258772 DUSP18Q8NEJ0 188 aa14.21□□□□□ -0.13
DDX56-201ENST00000258772 OR4E2Q8NGC2 313 aa14.21□□□□□ -0.13
DDX56-201ENST00000258772 MS4A4EQ96PG1 132 aa14.21□□□□□ -0.13
DDX56-201ENST00000258772 FCRL4Q96PJ5 515 aa14.21□□□□□ -0.13
DDX56-201ENST00000258772 SLX1AQ9BQ83 275 aa14.21□□□□□ -0.13
DDX56-201ENST00000258772 RNF32Q9H0A6 362 aa14.21□□□□□ -0.13
DDX56-201ENST00000258772 WDR70Q9NW82 654 aa14.21□□□□□ -0.13
DDX56-201ENST00000258772 RWDD3Q9Y3V2 267 aa14.21□□□□□ -0.13
DDX56-201ENST00000258772 WDR45Q9Y484 360 aa14.21□□□□□ -0.13
DDX56-201ENST00000258772 CENPBD1B2RD01 187 aa14.2□□□□□ -0.14
DDX56-201ENST00000258772 C5orf67F2Z3F1 127 aa14.2□□□□□ -0.14
DDX56-201ENST00000258772 SCO2O43819 266 aa14.2□□□□□ -0.14
DDX56-201ENST00000258772 FAM157BP0CG42 384 aa14.2□□□□□ -0.14
DDX56-201ENST00000258772 PSKH1P11801 424 aa14.2□□□□□ -0.14
DDX56-201ENST00000258772 CFL1P23528 166 aaKnown RBP14.2□□□□□ -0.14
DDX56-201ENST00000258772 GCGRP47871 477 aa14.2□□□□□ -0.14
DDX56-201ENST00000258772 SOX9P48436 509 aa14.2□□□□□ -0.14
DDX56-201ENST00000258772 CLDN2P57739 230 aa14.2□□□□□ -0.14
DDX56-201ENST00000258772 SNRPNP63162 240 aaKnown RBP14.2□□□□□ -0.14
DDX56-201ENST00000258772 RPS21P63220 83 aaKnown RBP14.2□□□□□ -0.14
DDX56-201ENST00000258772 CD83Q01151 205 aa14.2□□□□□ -0.14
DDX56-201ENST00000258772 ARHGAP11BQ3KRB8 267 aa14.2□□□□□ -0.14
DDX56-201ENST00000258772 MZT2BQ6NZ67 158 aa14.2□□□□□ -0.14
DDX56-201ENST00000258772 B3GLCTQ6Y288 498 aa14.2□□□□□ -0.14
DDX56-201ENST00000258772 ZNF836Q6ZNA1 936 aa14.2□□□□□ -0.14
DDX56-201ENST00000258772 CXXC5Q7LFL8 322 aaKnown RBP14.2□□□□□ -0.14
DDX56-201ENST00000258772 OR51G2Q8NGK0 314 aa14.2□□□□□ -0.14
DDX56-201ENST00000258772 GAL3ST3Q96A11 431 aa14.2□□□□□ -0.14
DDX56-201ENST00000258772 OTULINQ96BN8 352 aa14.2□□□□□ -0.14
DDX56-201ENST00000258772 TMEM43Q9BTV4 400 aa14.2□□□□□ -0.14
DDX56-201ENST00000258772 SLC17A9Q9BYT1 436 aa14.2□□□□□ -0.14
DDX56-201ENST00000258772 ISG20L2Q9H9L3 353 aaKnown RBP14.2□□□□□ -0.14
DDX56-201ENST00000258772 LYRM1O43325 122 aa14.2□□□□□ -0.14
DDX56-201ENST00000258772 AGR2O95994 175 aa14.2□□□□□ -0.14
DDX56-201ENST00000258772 ZGLP1P0C6A0 271 aa14.2□□□□□ -0.14
DDX56-201ENST00000258772 ZNF888P0CJ79 500 aaPredicted RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms