RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 C10orf82Q8WW14 230 aa12.6□□□□□ -0.39
PRPF38A-201ENST00000257181 NEDD4LQ96PU5 975 aa12.6□□□□□ -0.39
PRPF38A-201ENST00000257181 SEMA4GQ9NTN9 838 aa12.6□□□□□ -0.39
PRPF38A-201ENST00000257181 TUBA8Q9NY65 449 aaPredicted RBP12.6□□□□□ -0.39
PRPF38A-201ENST00000257181 CDH10Q9Y6N8 788 aa12.6□□□□□ -0.39
PRPF38A-201ENST00000257181 MYH11P35749 1972 aa12.6□□□□□ -0.39
PRPF38A-201ENST00000257181 RASAL1O95294 804 aa12.6□□□□□ -0.39
PRPF38A-201ENST00000257181 SPARCP09486 303 aa12.6□□□□□ -0.39
PRPF38A-201ENST00000257181 CRYZQ08257 329 aaKnown RBP12.6□□□□□ -0.39
PRPF38A-201ENST00000257181 WDR74Q6RFH5 385 aaPredicted RBP12.6□□□□□ -0.39
PRPF38A-201ENST00000257181 RBM15BQ8NDT2 890 aaKnown RBP12.6□□□□□ -0.39
PRPF38A-201ENST00000257181 FAM129BQ96TA1 746 aa12.6□□□□□ -0.39
PRPF38A-201ENST00000257181 WDR12Q9GZL7 423 aaKnown RBP12.6□□□□□ -0.39
PRPF38A-201ENST00000257181 NIPAL2Q9H841 368 aa12.6□□□□□ -0.39
PRPF38A-201ENST00000257181 KLHL13Q9P2N7 655 aa12.6□□□□□ -0.39
PRPF38A-201ENST00000257181 ABCG2Q9UNQ0 655 aa12.6□□□□□ -0.39
PRPF38A-201ENST00000257181 PMF1-BGLAPU3KQ54 211 aa12.6□□□□□ -0.39
PRPF38A-201ENST00000257181 PTGER4P35408 488 aa12.6□□□□□ -0.39
PRPF38A-201ENST00000257181 CARD18P57730 90 aa12.6□□□□□ -0.39
PRPF38A-201ENST00000257181 TSPAN5P62079 268 aa12.6□□□□□ -0.39
PRPF38A-201ENST00000257181 CCL7P80098 99 aa12.6□□□□□ -0.39
PRPF38A-201ENST00000257181 GLO1Q04760 184 aa12.6□□□□□ -0.39
PRPF38A-201ENST00000257181 SLC3A1Q07837 685 aa12.6□□□□□ -0.39
PRPF38A-201ENST00000257181 ARFRP1Q13795 201 aa12.6□□□□□ -0.39
PRPF38A-201ENST00000257181 ISLR2Q6UXK2 745 aa12.6□□□□□ -0.39
PRPF38A-201ENST00000257181 OR1N1Q8NGS0 311 aa12.6□□□□□ -0.39
PRPF38A-201ENST00000257181 CPT1CQ8TCG5 803 aa12.6□□□□□ -0.39
PRPF38A-201ENST00000257181 PEX16Q9Y5Y5 336 aa12.6□□□□□ -0.39
PRPF38A-201ENST00000257181 B4E171 279 aa12.59□□□□□ -0.39
PRPF38A-201ENST00000257181 NARSO43776 548 aaKnown RBP12.59□□□□□ -0.39
PRPF38A-201ENST00000257181 TRMUO75648 421 aaKnown RBP12.59□□□□□ -0.39
PRPF38A-201ENST00000257181 TSPAN7P41732 249 aa12.59□□□□□ -0.39
PRPF38A-201ENST00000257181 CPZQ66K79 652 aa12.59□□□□□ -0.39
PRPF38A-201ENST00000257181 CAMKMTQ7Z624 323 aa12.59□□□□□ -0.39
PRPF38A-201ENST00000257181 ZNF101Q8IZC7 436 aa12.59□□□□□ -0.39
PRPF38A-201ENST00000257181 OR6N2Q8NGY6 317 aa12.59□□□□□ -0.39
PRPF38A-201ENST00000257181 LHPPQ9H008 270 aa12.59□□□□□ -0.39
PRPF38A-201ENST00000257181 CDCP1Q9H5V8 836 aa12.59□□□□□ -0.39
PRPF38A-201ENST00000257181 POLE4Q9NR33 117 aa12.59□□□□□ -0.39
PRPF38A-201ENST00000257181 ZNF346Q9UL40 294 aaKnown RBP12.59□□□□□ -0.39
PRPF38A-201ENST00000257181 LOC100506127A0A0U1RQW1 187 aa12.59□□□□□ -0.39
PRPF38A-201ENST00000257181 CDK2AP1O14519 115 aa12.59□□□□□ -0.39
PRPF38A-201ENST00000257181 NAGAP17050 411 aa12.59□□□□□ -0.39
PRPF38A-201ENST00000257181 CD40LGP29965 261 aa12.59□□□□□ -0.39
PRPF38A-201ENST00000257181 ENTPD1P49961 510 aa12.59□□□□□ -0.39
PRPF38A-201ENST00000257181 CRISP1P54107 249 aa12.59□□□□□ -0.39
PRPF38A-201ENST00000257181 ACVR1Q04771 509 aa12.59□□□□□ -0.39
PRPF38A-201ENST00000257181 LTB4RQ15722 352 aa12.59□□□□□ -0.39
PRPF38A-201ENST00000257181 PRSS42Q7Z5A4 293 aa12.59□□□□□ -0.39
PRPF38A-201ENST00000257181 OR13J1Q8NGT2 312 aa12.59□□□□□ -0.39
PRPF38A-201ENST00000257181 TMEM80Q96HE8 168 aa12.59□□□□□ -0.39
PRPF38A-201ENST00000257181 FGF3P11487 239 aaPredicted RBP12.59□□□□□ -0.39
PRPF38A-201ENST00000257181 CR2P20023 1033 aa12.59□□□□□ -0.39
PRPF38A-201ENST00000257181 CCR2P41597 374 aa12.59□□□□□ -0.39
PRPF38A-201ENST00000257181 RGRP47804 291 aa12.59□□□□□ -0.39
PRPF38A-201ENST00000257181 ADAM8P78325 824 aa12.59□□□□□ -0.39
PRPF38A-201ENST00000257181 NRF1Q16656 503 aa12.59□□□□□ -0.39
PRPF38A-201ENST00000257181 PLK5Q496M5 336 aa12.59□□□□□ -0.39
PRPF38A-201ENST00000257181 BCL2L15Q5TBC7 163 aa12.59□□□□□ -0.39
PRPF38A-201ENST00000257181 CES4AQ5XG92 561 aa12.59□□□□□ -0.39
PRPF38A-201ENST00000257181 BLOC1S3Q6QNY0 202 aa12.59□□□□□ -0.39
PRPF38A-201ENST00000257181 ZBTB8AQ96BR9 441 aa12.59□□□□□ -0.39
PRPF38A-201ENST00000257181 PITX2Q99697 317 aa12.59□□□□□ -0.39
PRPF38A-201ENST00000257181 LRRC61Q9BV99 259 aa12.59□□□□□ -0.39
PRPF38A-201ENST00000257181 NELFAQ9H3P2 528 aa12.59□□□□□ -0.39
PRPF38A-201ENST00000257181 ECM29Q5VYK3 1845 aa12.59□□□□□ -0.39
PRPF38A-201ENST00000257181 DHFRP00374 187 aa12.59□□□□□ -0.39
PRPF38A-201ENST00000257181 PVALBP20472 110 aaPredicted RBP12.59□□□□□ -0.39
PRPF38A-201ENST00000257181 CPOXP36551 454 aa12.59□□□□□ -0.39
PRPF38A-201ENST00000257181 SGSHP51688 502 aa12.59□□□□□ -0.39
PRPF38A-201ENST00000257181 BNIP1Q12981 228 aa12.59□□□□□ -0.39
PRPF38A-201ENST00000257181 ALG10Q5BKT4 473 aa12.59□□□□□ -0.39
PRPF38A-201ENST00000257181 DENND5AQ6IQ26 1287 aa12.59□□□□□ -0.39
PRPF38A-201ENST00000257181 GFRALQ6UXV0 394 aa12.59□□□□□ -0.39
PRPF38A-201ENST00000257181 ARHGAP22Q7Z5H3 698 aa12.59□□□□□ -0.39
PRPF38A-201ENST00000257181 SERPINA11Q86U17 422 aa12.59□□□□□ -0.39
PRPF38A-201ENST00000257181 CLVS1Q8IUQ0 354 aaPredicted RBP12.59□□□□□ -0.39
PRPF38A-201ENST00000257181 NANOGQ9H9S0 305 aa12.59□□□□□ -0.39
PRPF38A-201ENST00000257181 USP22Q9UPT9 525 aa12.59□□□□□ -0.39
PRPF38A-201ENST00000257181 DHDHQ9UQ10 334 aa12.59□□□□□ -0.39
PRPF38A-201ENST00000257181 PCDHGA6Q9Y5G7 932 aa12.59□□□□□ -0.39
PRPF38A-201ENST00000257181 ARNTLO00327 626 aa12.58□□□□□ -0.4
PRPF38A-201ENST00000257181 RLN2P04090 185 aa12.58□□□□□ -0.4
PRPF38A-201ENST00000257181 RLN1P04808 185 aa12.58□□□□□ -0.4
PRPF38A-201ENST00000257181 ANXA3P12429 323 aa12.58□□□□□ -0.4
PRPF38A-201ENST00000257181 GABRA1P14867 456 aa12.58□□□□□ -0.4
PRPF38A-201ENST00000257181 IL3RAP26951 378 aa12.58□□□□□ -0.4
PRPF38A-201ENST00000257181 RPL5P46777 297 aaKnown RBP12.58□□□□□ -0.4
PRPF38A-201ENST00000257181 HERV-K104P61576 105 aa12.58□□□□□ -0.4
PRPF38A-201ENST00000257181 ANKRD19PQ9H560 264 aa12.58□□□□□ -0.4
PRPF38A-201ENST00000257181 MBNL1Q9NR56 388 aaKnown RBP12.58□□□□□ -0.4
PRPF38A-201ENST00000257181 TRIM64A6NGJ6 449 aa12.58□□□□□ -0.4
PRPF38A-201ENST00000257181 ZNF814B7Z6K7 855 aa12.58□□□□□ -0.4
PRPF38A-201ENST00000257181 OR1D4P47884 311 aa12.58□□□□□ -0.4
PRPF38A-201ENST00000257181 ALDH3A2P51648 485 aa12.58□□□□□ -0.4
PRPF38A-201ENST00000257181 ZP2Q05996 745 aa12.58□□□□□ -0.4
PRPF38A-201ENST00000257181 PYDC2Q56P42 97 aa12.58□□□□□ -0.4
PRPF38A-201ENST00000257181 HES3Q5TGS1 186 aa12.58□□□□□ -0.4
PRPF38A-201ENST00000257181 STPG1Q5TH74 334 aa12.58□□□□□ -0.4
PRPF38A-201ENST00000257181 VWA5B1Q5TIE3 1220 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms