RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 E2F3O00716 465 aa17.86■□□□□ 0.45
PTPRE-201ENST00000254667 CD97P48960 835 aa17.86■□□□□ 0.45
PTPRE-201ENST00000254667 POU3F4P49335 361 aa17.86■□□□□ 0.45
PTPRE-201ENST00000254667 CPOQ8IVL8 374 aa17.86■□□□□ 0.45
PTPRE-201ENST00000254667 ZNF709Q8N972 641 aa17.86■□□□□ 0.45
PTPRE-201ENST00000254667 CDS1Q92903 461 aa17.86■□□□□ 0.45
PTPRE-201ENST00000254667 OR4K3Q96R72 315 aa17.86■□□□□ 0.45
PTPRE-201ENST00000254667 POU2F3Q9UKI9 436 aa17.86■□□□□ 0.45
PTPRE-201ENST00000254667 PTRH2Q9Y3E5 179 aaKnown RBP17.86■□□□□ 0.45
PTPRE-201ENST00000254667 IGLV3-10A0A075B6K4 115 aa17.86■□□□□ 0.45
PTPRE-201ENST00000254667 OR7A10O76100 309 aa17.86■□□□□ 0.45
PTPRE-201ENST00000254667 GCAP28676 217 aa17.86■□□□□ 0.45
PTPRE-201ENST00000254667 GNMTQ14749 295 aa17.86■□□□□ 0.45
PTPRE-201ENST00000254667 ZNF791Q3KP31 576 aaPredicted RBP17.86■□□□□ 0.45
PTPRE-201ENST00000254667 GAREM2Q75VX8 874 aa17.86■□□□□ 0.45
PTPRE-201ENST00000254667 IQCF1Q8N6M8 205 aa17.86■□□□□ 0.45
PTPRE-201ENST00000254667 COPZ2Q9P299 210 aa17.86■□□□□ 0.45
PTPRE-201ENST00000254667 IRF2P14316 349 aa17.86■□□□□ 0.45
PTPRE-201ENST00000254667 CPOXP36551 454 aa17.86■□□□□ 0.45
PTPRE-201ENST00000254667 CDK5R2Q13319 367 aa17.86■□□□□ 0.45
PTPRE-201ENST00000254667 TMEM205Q6UW68 189 aa17.86■□□□□ 0.45
PTPRE-201ENST00000254667 CBLL1Q75N03 491 aa17.86■□□□□ 0.45
PTPRE-201ENST00000254667 GPR149Q86SP6 731 aa17.86■□□□□ 0.45
PTPRE-201ENST00000254667 PGBD5Q8N414 524 aa17.86■□□□□ 0.45
PTPRE-201ENST00000254667 TM9SF4Q92544 642 aa17.86■□□□□ 0.45
PTPRE-201ENST00000254667 ABCG2Q9UNQ0 655 aa17.86■□□□□ 0.45
PTPRE-201ENST00000254667 T-ENOLP0DO92 83 aa17.85■□□□□ 0.45
PTPRE-201ENST00000254667 UGT8Q16880 541 aa17.85■□□□□ 0.45
PTPRE-201ENST00000254667 FAM76BQ5HYJ3 339 aa17.85■□□□□ 0.45
PTPRE-201ENST00000254667 TANGO2Q6ICL3 276 aa17.85■□□□□ 0.45
PTPRE-201ENST00000254667 PIAS4Q8N2W9 510 aaPredicted RBP17.85■□□□□ 0.45
PTPRE-201ENST00000254667 AGPAT4Q9NRZ5 378 aa17.85■□□□□ 0.45
PTPRE-201ENST00000254667 CNIH4Q9P003 139 aa17.85■□□□□ 0.45
PTPRE-201ENST00000254667 NUMBLQ9Y6R0 609 aa17.85■□□□□ 0.45
PTPRE-201ENST00000254667 SLC33A1O00400 549 aaPredicted RBP17.85■□□□□ 0.45
PTPRE-201ENST00000254667 MAS1P04201 325 aa17.85■□□□□ 0.45
PTPRE-201ENST00000254667 PXNP49023 591 aaPredicted RBP17.85■□□□□ 0.45
PTPRE-201ENST00000254667 CSNK2A1P68400 391 aaPredicted RBP17.85■□□□□ 0.45
PTPRE-201ENST00000254667 OR5D16Q8NGK9 328 aa17.85■□□□□ 0.45
PTPRE-201ENST00000254667 C3orf30Q96M34 536 aa17.85■□□□□ 0.45
PTPRE-201ENST00000254667 ABCG5Q9H222 651 aa17.85■□□□□ 0.45
PTPRE-201ENST00000254667 ZNF442Q9H7R0 627 aa17.85■□□□□ 0.45
PTPRE-201ENST00000254667 GPN2Q9H9Y4 310 aaPredicted RBP17.85■□□□□ 0.45
PTPRE-201ENST00000254667 CBLCQ9ULV8 474 aa17.85■□□□□ 0.45
PTPRE-201ENST00000254667 PDE4DIPQ5VU43 2346 aa17.85■□□□□ 0.45
PTPRE-201ENST00000254667 MAST2Q6P0Q8 1798 aa17.85■□□□□ 0.45
PTPRE-201ENST00000254667 TCRBV5S1A1TA0A578 114 aa17.85■□□□□ 0.45
PTPRE-201ENST00000254667 H2AFB2P0C5Z0 115 aa17.85■□□□□ 0.45
PTPRE-201ENST00000254667 ZNF595Q8IYB9 648 aa17.85■□□□□ 0.45
PTPRE-201ENST00000254667 POGLUT1Q8NBL1 392 aa17.85■□□□□ 0.45
PTPRE-201ENST00000254667 ARRDC3Q96B67 414 aa17.85■□□□□ 0.45
PTPRE-201ENST00000254667 HSPB11Q9Y547 144 aa17.85■□□□□ 0.45
PTPRE-201ENST00000254667 PPP1R3BQ86XI6 285 aa17.85■□□□□ 0.45
PTPRE-201ENST00000254667 ZNF611Q8N823 705 aa17.85■□□□□ 0.45
PTPRE-201ENST00000254667 SLC6A7Q99884 636 aa17.85■□□□□ 0.45
PTPRE-201ENST00000254667 ALG8Q9BVK2 526 aa17.85■□□□□ 0.45
PTPRE-201ENST00000254667 KCNS2Q9ULS6 477 aa17.85■□□□□ 0.45
PTPRE-201ENST00000254667 C12orf71A8MTZ7 269 aa17.85■□□□□ 0.45
PTPRE-201ENST00000254667 BCAT2O15382 392 aaPredicted RBP17.85■□□□□ 0.45
PTPRE-201ENST00000254667 SYT7O43581 403 aa17.85■□□□□ 0.45
PTPRE-201ENST00000254667 LDB3O75112 727 aa17.85■□□□□ 0.45
PTPRE-201ENST00000254667 PITPNBP48739 271 aa17.85■□□□□ 0.45
PTPRE-201ENST00000254667 GLO1Q04760 184 aa17.85■□□□□ 0.45
PTPRE-201ENST00000254667 RSU1Q15404 277 aa17.85■□□□□ 0.45
PTPRE-201ENST00000254667 TSC22D1Q15714 1073 aa17.85■□□□□ 0.45
PTPRE-201ENST00000254667 LRRC26Q2I0M4 334 aa17.85■□□□□ 0.45
PTPRE-201ENST00000254667 ZFP41Q8N8Y5 198 aa17.85■□□□□ 0.45
PTPRE-201ENST00000254667 MFSD8Q8NHS3 518 aa17.85■□□□□ 0.45
PTPRE-201ENST00000254667 BEX2Q9BXY8 128 aa17.85■□□□□ 0.45
PTPRE-201ENST00000254667 RANBP3Q9H6Z4 567 aaPredicted RBP17.85■□□□□ 0.45
PTPRE-201ENST00000254667 BEX1Q9HBH7 125 aa17.85■□□□□ 0.45
PTPRE-201ENST00000254667 CDH20Q9HBT6 801 aa17.85■□□□□ 0.45
PTPRE-201ENST00000254667 TREM1Q9NP99 234 aa17.85■□□□□ 0.45
PTPRE-201ENST00000254667 MLC1Q15049 377 aa17.84■□□□□ 0.45
PTPRE-201ENST00000254667 FAM83HQ6ZRV2 1179 aaPredicted RBP17.84■□□□□ 0.45
PTPRE-201ENST00000254667 BEND4Q6ZU67 534 aa17.84■□□□□ 0.45
PTPRE-201ENST00000254667 SPPL3Q8TCT6 385 aa17.84■□□□□ 0.45
PTPRE-201ENST00000254667 TBC1D20Q96BZ9 403 aa17.84■□□□□ 0.45
PTPRE-201ENST00000254667 C1QTNF2Q9BXJ5 285 aa17.84■□□□□ 0.45
PTPRE-201ENST00000254667 THAP10Q9P2Z0 257 aaPredicted RBP17.84■□□□□ 0.45
PTPRE-201ENST00000254667 ICKQ9UPZ9 632 aa17.84■□□□□ 0.45
PTPRE-201ENST00000254667 BTAF1O14981 1849 aa17.84■□□□□ 0.45
PTPRE-201ENST00000254667 FAM205BPQ63HN1 556 aa17.84■□□□□ 0.45
PTPRE-201ENST00000254667 ANKRD54Q6NXT1 300 aa17.84■□□□□ 0.45
PTPRE-201ENST00000254667 SUN5Q8TC36 379 aa17.84■□□□□ 0.45
PTPRE-201ENST00000254667 OR5B2Q96R09 309 aa17.84■□□□□ 0.45
PTPRE-201ENST00000254667 OR7D2Q96RA2 312 aa17.84■□□□□ 0.45
PTPRE-201ENST00000254667 STARD5Q9NSY2 213 aa17.84■□□□□ 0.45
PTPRE-201ENST00000254667 ATXN7L1Q9ULK2 861 aaPredicted RBP17.84■□□□□ 0.45
PTPRE-201ENST00000254667 HIF3AQ9Y2N7 669 aa17.84■□□□□ 0.45
PTPRE-201ENST00000254667 TCRBV3S1A0A5B6 114 aa17.84■□□□□ 0.45
PTPRE-201ENST00000254667 M0R233 179 aa17.84■□□□□ 0.45
PTPRE-201ENST00000254667 GPR39O43194 453 aa17.84■□□□□ 0.45
PTPRE-201ENST00000254667 MAGEA3P43357 314 aa17.84■□□□□ 0.45
PTPRE-201ENST00000254667 RAB40BQ12829 278 aa17.84■□□□□ 0.45
PTPRE-201ENST00000254667 RNASE10Q5GAN6 216 aaKnown RBP17.84■□□□□ 0.45
PTPRE-201ENST00000254667 CLEC14AQ86T13 490 aa17.84■□□□□ 0.45
PTPRE-201ENST00000254667 SMIM14Q96QK8 99 aa17.84■□□□□ 0.45
PTPRE-201ENST00000254667 SYT4Q9H2B2 425 aa17.84■□□□□ 0.45
PTPRE-201ENST00000254667 MAB21L2Q9Y586 359 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms