RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 NNATQ16517 81 aa11.21□□□□□ -0.62
USHBP1-201ENST00000252597 CLPPQ16740 277 aaPredicted RBP11.21□□□□□ -0.62
USHBP1-201ENST00000252597 ENTPD8Q5MY95 495 aa11.21□□□□□ -0.62
USHBP1-201ENST00000252597 OTPQ5XKR4 325 aa11.21□□□□□ -0.62
USHBP1-201ENST00000252597 BICRALQ6AI39 1079 aa11.21□□□□□ -0.62
USHBP1-201ENST00000252597 KANSL1Q7Z3B3 1105 aa11.21□□□□□ -0.62
USHBP1-201ENST00000252597 OR8K3Q8NH51 312 aa11.21□□□□□ -0.62
USHBP1-201ENST00000252597 CXorf40BQ96DE9 158 aa11.21□□□□□ -0.62
USHBP1-201ENST00000252597 SPATA5L1Q9BVQ7 753 aa11.21□□□□□ -0.62
USHBP1-201ENST00000252597 ZDHHC5Q9C0B5 715 aa11.21□□□□□ -0.62
USHBP1-201ENST00000252597 SLC25A18Q9H1K4 315 aa11.21□□□□□ -0.62
USHBP1-201ENST00000252597 SIRT4Q9Y6E7 314 aaPredicted RBP11.21□□□□□ -0.62
USHBP1-201ENST00000252597 KLHL18O94889 574 aa11.2□□□□□ -0.62
USHBP1-201ENST00000252597 RPP14O95059 124 aaKnown RBP11.2□□□□□ -0.62
USHBP1-201ENST00000252597 PIPP12273 146 aaPredicted RBP11.2□□□□□ -0.62
USHBP1-201ENST00000252597 ENDOUP21128 410 aaKnown RBP11.2□□□□□ -0.62
USHBP1-201ENST00000252597 PSMB10P40306 273 aa11.2□□□□□ -0.62
USHBP1-201ENST00000252597 PRPF38BQ5VTL8 546 aaKnown RBP11.2□□□□□ -0.62
USHBP1-201ENST00000252597 SLC25A25Q6KCM7 469 aa11.2□□□□□ -0.62
USHBP1-201ENST00000252597 QSOX2Q6ZRP7 698 aa11.2□□□□□ -0.62
USHBP1-201ENST00000252597 RNF165Q6ZSG1 346 aa11.2□□□□□ -0.62
USHBP1-201ENST00000252597 FTMTQ8N4E7 242 aa11.2□□□□□ -0.62
USHBP1-201ENST00000252597 FBXO15Q8NCQ5 510 aaPredicted RBP11.2□□□□□ -0.62
USHBP1-201ENST00000252597 NUP43Q8NFH3 380 aa11.2□□□□□ -0.62
USHBP1-201ENST00000252597 OR52L1Q8NGH7 329 aa11.2□□□□□ -0.62
USHBP1-201ENST00000252597 FCRL1Q96LA6 429 aa11.2□□□□□ -0.62
USHBP1-201ENST00000252597 CPEB1Q9BZB8 566 aaKnown RBP11.2□□□□□ -0.62
USHBP1-201ENST00000252597 PAK6Q9NQU5 681 aaPredicted RBP11.2□□□□□ -0.62
USHBP1-201ENST00000252597 KLHL42Q9P2K6 505 aa11.2□□□□□ -0.62
USHBP1-201ENST00000252597 A0A1B0GVT2 93 aa11.2□□□□□ -0.62
USHBP1-201ENST00000252597 FOXE1O00358 373 aaPredicted RBP11.2□□□□□ -0.62
USHBP1-201ENST00000252597 MID1O15344 667 aa11.2□□□□□ -0.62
USHBP1-201ENST00000252597 HCN1O60741 890 aa11.2□□□□□ -0.62
USHBP1-201ENST00000252597 SOD1P00441 154 aa11.2□□□□□ -0.62
USHBP1-201ENST00000252597 C1QBP02746 253 aa11.2□□□□□ -0.62
USHBP1-201ENST00000252597 KHKP50053 298 aa11.2□□□□□ -0.62
USHBP1-201ENST00000252597 DGCR2P98153 550 aa11.2□□□□□ -0.62
USHBP1-201ENST00000252597 DUSP2Q05923 314 aa11.2□□□□□ -0.62
USHBP1-201ENST00000252597 ST3GAL3Q11203 375 aa11.2□□□□□ -0.62
USHBP1-201ENST00000252597 TRAM2Q15035 370 aa11.2□□□□□ -0.62
USHBP1-201ENST00000252597 AGERQ15109 404 aa11.2□□□□□ -0.62
USHBP1-201ENST00000252597 SF3A2Q15428 464 aaKnown RBP11.2□□□□□ -0.62
USHBP1-201ENST00000252597 ZNF628Q5EBL2 1059 aa11.2□□□□□ -0.62
USHBP1-201ENST00000252597 COMMD7Q86VX2 200 aa11.2□□□□□ -0.62
USHBP1-201ENST00000252597 ACBD7Q8N6N7 88 aa11.2□□□□□ -0.62
USHBP1-201ENST00000252597 SLC16A11Q8NCK7 471 aa11.2□□□□□ -0.62
USHBP1-201ENST00000252597 OR10G6Q8NH81 332 aa11.2□□□□□ -0.62
USHBP1-201ENST00000252597 PMEPA1Q969W9 287 aa11.2□□□□□ -0.62
USHBP1-201ENST00000252597 TRMT2BQ96GJ1 504 aaKnown RBP11.2□□□□□ -0.62
USHBP1-201ENST00000252597 AMDHD1Q96NU7 426 aa11.2□□□□□ -0.62
USHBP1-201ENST00000252597 NKX3-1Q99801 234 aaPredicted RBP11.2□□□□□ -0.62
USHBP1-201ENST00000252597 RNF32Q9H0A6 362 aa11.2□□□□□ -0.62
USHBP1-201ENST00000252597 BTBD1Q9H0C5 482 aa11.2□□□□□ -0.62
USHBP1-201ENST00000252597 RETREG1Q9H6L5 497 aa11.2□□□□□ -0.62
USHBP1-201ENST00000252597 FZD3Q9NPG1 666 aa11.2□□□□□ -0.62
USHBP1-201ENST00000252597 SIRT3Q9NTG7 399 aaPredicted RBP11.2□□□□□ -0.62
USHBP1-201ENST00000252597 TMEM5Q9Y2B1 443 aa11.2□□□□□ -0.62
USHBP1-201ENST00000252597 EXOSC1Q9Y3B2 195 aaKnown RBP11.2□□□□□ -0.62
USHBP1-201ENST00000252597 FNDC1Q4ZHG4 1894 aaPredicted RBP11.2□□□□□ -0.62
USHBP1-201ENST00000252597 IGLON5A6NGN9 336 aa11.2□□□□□ -0.62
USHBP1-201ENST00000252597 LRRC72A6NJI9 287 aa11.2□□□□□ -0.62
USHBP1-201ENST00000252597 SLC9B1P1A6NJY1 282 aa11.2□□□□□ -0.62
USHBP1-201ENST00000252597 NARSO43776 548 aaKnown RBP11.2□□□□□ -0.62
USHBP1-201ENST00000252597 ACADMP11310 421 aa11.2□□□□□ -0.62
USHBP1-201ENST00000252597 OR12D2P58182 307 aa11.2□□□□□ -0.62
USHBP1-201ENST00000252597 TAS2R38P59533 333 aa11.2□□□□□ -0.62
USHBP1-201ENST00000252597 HES5Q5TA89 166 aa11.2□□□□□ -0.62
USHBP1-201ENST00000252597 TCEAL8Q8IYN2 117 aa11.2□□□□□ -0.62
USHBP1-201ENST00000252597 C12orf76Q8N812 135 aaPredicted RBP11.2□□□□□ -0.62
USHBP1-201ENST00000252597 BOLLQ8N9W6 283 aaKnown RBP11.2□□□□□ -0.62
USHBP1-201ENST00000252597 OR6K6Q8NGW6 343 aa11.2□□□□□ -0.62
USHBP1-201ENST00000252597 ZMYND19Q96E35 227 aaPredicted RBP11.2□□□□□ -0.62
USHBP1-201ENST00000252597 C4orf36Q96KX1 117 aa11.2□□□□□ -0.62
USHBP1-201ENST00000252597 HYLS1Q96M11 299 aa11.2□□□□□ -0.62
USHBP1-201ENST00000252597 ABHD1Q96SE0 405 aa11.2□□□□□ -0.62
USHBP1-201ENST00000252597 HCAR1Q9BXC0 346 aa11.2□□□□□ -0.62
USHBP1-201ENST00000252597 NPIPB8E9PQR5 432 aa11.19□□□□□ -0.62
USHBP1-201ENST00000252597 CHST10O43529 356 aa11.19□□□□□ -0.62
USHBP1-201ENST00000252597 TSPAN9O75954 239 aa11.19□□□□□ -0.62
USHBP1-201ENST00000252597 CCL5P13501 91 aa11.19□□□□□ -0.62
USHBP1-201ENST00000252597 ITGB7P26010 798 aa11.19□□□□□ -0.62
USHBP1-201ENST00000252597 PTGS2P35354 604 aa11.19□□□□□ -0.62
USHBP1-201ENST00000252597 TSPAN5P62079 268 aa11.19□□□□□ -0.62
USHBP1-201ENST00000252597 OCLNQ16625 522 aa11.19□□□□□ -0.62
USHBP1-201ENST00000252597 C3orf38Q5JPI3 329 aa11.19□□□□□ -0.62
USHBP1-201ENST00000252597 OR4C11Q6IEV9 310 aa11.19□□□□□ -0.62
USHBP1-201ENST00000252597 CAMKMTQ7Z624 323 aa11.19□□□□□ -0.62
USHBP1-201ENST00000252597 PLCZ1Q86YW0 608 aa11.19□□□□□ -0.62
USHBP1-201ENST00000252597 KLHDC8AQ8IYD2 350 aa11.19□□□□□ -0.62
USHBP1-201ENST00000252597 CPA6Q8N4T0 437 aa11.19□□□□□ -0.62
USHBP1-201ENST00000252597 C10orf53Q8N6V4 93 aa11.19□□□□□ -0.62
USHBP1-201ENST00000252597 ZNF527Q8NB42 609 aa11.19□□□□□ -0.62
USHBP1-201ENST00000252597 FAM98AQ8NCA5 519 aaKnown RBP11.19□□□□□ -0.62
USHBP1-201ENST00000252597 OR2T33Q8NG76 320 aa11.19□□□□□ -0.62
USHBP1-201ENST00000252597 OR4D9Q8NGE8 314 aa11.19□□□□□ -0.62
USHBP1-201ENST00000252597 GOT1L1Q8NHS2 421 aaPredicted RBP11.19□□□□□ -0.62
USHBP1-201ENST00000252597 OTUB2Q96DC9 234 aa11.19□□□□□ -0.62
USHBP1-201ENST00000252597 MSLNLQ96KJ4 702 aa11.19□□□□□ -0.62
USHBP1-201ENST00000252597 PRRC1Q96M27 445 aa11.19□□□□□ -0.62
USHBP1-201ENST00000252597 ARHGAP9Q9BRR9 750 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms