RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 FBXO34Q9NWN3 711 aa13.14□□□□□ -0.31
SDF2-201ENST00000247020 C19orf25Q9UFG5 118 aaPredicted RBP13.14□□□□□ -0.31
SDF2-201ENST00000247020 TESQ9UGI8 421 aaKnown RBP13.14□□□□□ -0.31
SDF2-201ENST00000247020 MYRFQ9Y2G1 1151 aa13.14□□□□□ -0.31
SDF2-201ENST00000247020 BCKDKO14874 412 aa13.13□□□□□ -0.31
SDF2-201ENST00000247020 TO15178 435 aa13.13□□□□□ -0.31
SDF2-201ENST00000247020 CDK4P11802 303 aa13.13□□□□□ -0.31
SDF2-201ENST00000247020 TAS2R41P59536 307 aa13.13□□□□□ -0.31
SDF2-201ENST00000247020 PIN1Q13526 163 aaPredicted RBP13.13□□□□□ -0.31
SDF2-201ENST00000247020 FGFBP1Q14512 234 aa13.13□□□□□ -0.31
SDF2-201ENST00000247020 TRAM2Q15035 370 aa13.13□□□□□ -0.31
SDF2-201ENST00000247020 EBPQ15125 230 aaKnown RBP13.13□□□□□ -0.31
SDF2-201ENST00000247020 KCTD21Q4G0X4 260 aa13.13□□□□□ -0.31
SDF2-201ENST00000247020 FGD3Q5JSP0 725 aa13.13□□□□□ -0.31
SDF2-201ENST00000247020 MRPL2Q5T653 305 aaKnown RBP13.13□□□□□ -0.31
SDF2-201ENST00000247020 ZNF691Q5VV52 312 aa13.13□□□□□ -0.31
SDF2-201ENST00000247020 ANKRD34AQ69YU3 496 aa13.13□□□□□ -0.31
SDF2-201ENST00000247020 TTC33Q6PID6 262 aaPredicted RBP13.13□□□□□ -0.31
SDF2-201ENST00000247020 TMEM205Q6UW68 189 aa13.13□□□□□ -0.31
SDF2-201ENST00000247020 SLC29A4Q7RTT9 530 aa13.13□□□□□ -0.31
SDF2-201ENST00000247020 ANKRD37Q7Z713 158 aa13.13□□□□□ -0.31
SDF2-201ENST00000247020 ZSCAN1Q8NBB4 408 aa13.13□□□□□ -0.31
SDF2-201ENST00000247020 SLC38A4Q969I6 547 aa13.13□□□□□ -0.31
SDF2-201ENST00000247020 ADIPOR1Q96A54 375 aa13.13□□□□□ -0.31
SDF2-201ENST00000247020 HSPBAP1Q96EW2 488 aa13.13□□□□□ -0.31
SDF2-201ENST00000247020 LIN37Q96GY3 246 aaPredicted RBP13.13□□□□□ -0.31
SDF2-201ENST00000247020 MUS81Q96NY9 551 aa13.13□□□□□ -0.31
SDF2-201ENST00000247020 SPSB2Q99619 263 aa13.13□□□□□ -0.31
SDF2-201ENST00000247020 DGCR6LQ9BY27 220 aa13.13□□□□□ -0.31
SDF2-201ENST00000247020 SEMA4CQ9C0C4 833 aa13.13□□□□□ -0.31
SDF2-201ENST00000247020 SLC39A1Q9NY26 324 aa13.13□□□□□ -0.31
SDF2-201ENST00000247020 KCNE5Q9UJ90 142 aa13.13□□□□□ -0.31
SDF2-201ENST00000247020 TTC28Q96AY4 2481 aa13.13□□□□□ -0.31
SDF2-201ENST00000247020 TRBV4-1A0A0J9YWV2 114 aa13.12□□□□□ -0.31
SDF2-201ENST00000247020 C2orf92A0A1B0GVN3 265 aa13.12□□□□□ -0.31
SDF2-201ENST00000247020 SH3PXD2BA1X283 911 aa13.12□□□□□ -0.31
SDF2-201ENST00000247020 SAGE2PA6NJ88 616 aa13.12□□□□□ -0.31
SDF2-201ENST00000247020 A8MUA0 341 aa13.12□□□□□ -0.31
SDF2-201ENST00000247020 H3BNH8 94 aa13.12□□□□□ -0.31
SDF2-201ENST00000247020 PEX12O00623 359 aa13.12□□□□□ -0.31
SDF2-201ENST00000247020 IL33O95760 270 aa13.12□□□□□ -0.31
SDF2-201ENST00000247020 IGKV1D-16P01601 117 aa13.12□□□□□ -0.31
SDF2-201ENST00000247020 ADH7P40394 386 aa13.12□□□□□ -0.31
SDF2-201ENST00000247020 GPR143P51810 404 aa13.12□□□□□ -0.31
SDF2-201ENST00000247020 ZNF136P52737 540 aa13.12□□□□□ -0.31
SDF2-201ENST00000247020 EMP2P54851 167 aa13.12□□□□□ -0.31
SDF2-201ENST00000247020 TPD52P55327 224 aaPredicted RBP13.12□□□□□ -0.31
SDF2-201ENST00000247020 NUP107P57740 925 aa13.12□□□□□ -0.31
SDF2-201ENST00000247020 ESRRGP62508 458 aa13.12□□□□□ -0.31
SDF2-201ENST00000247020 ENTPD8Q5MY95 495 aa13.12□□□□□ -0.31
SDF2-201ENST00000247020 CDCP2Q5VXM1 449 aa13.12□□□□□ -0.31
SDF2-201ENST00000247020 CD300LDQ6UXZ3 194 aa13.12□□□□□ -0.31
SDF2-201ENST00000247020 ZNF517Q6ZMY9 492 aaPredicted RBP13.12□□□□□ -0.31
SDF2-201ENST00000247020 APLFQ8IW19 511 aaPredicted RBP13.12□□□□□ -0.31
SDF2-201ENST00000247020 OR4N2Q8NGD1 307 aa13.12□□□□□ -0.31
SDF2-201ENST00000247020 SLC7A13Q8TCU3 470 aa13.12□□□□□ -0.31
SDF2-201ENST00000247020 HRASLS5Q96KN8 279 aa13.12□□□□□ -0.31
SDF2-201ENST00000247020 MCHR1Q99705 422 aa13.12□□□□□ -0.31
SDF2-201ENST00000247020 APOL4Q9BPW4 351 aa13.12□□□□□ -0.31
SDF2-201ENST00000247020 NUDT9Q9BW91 350 aa13.12□□□□□ -0.31
SDF2-201ENST00000247020 IRF2BPLQ9H1B7 796 aa13.12□□□□□ -0.31
SDF2-201ENST00000247020 RIBC2Q9H4K1 309 aa13.12□□□□□ -0.31
SDF2-201ENST00000247020 MAN2C1Q9NTJ4 1040 aa13.12□□□□□ -0.31
SDF2-201ENST00000247020 RHCGQ9UBD6 479 aa13.12□□□□□ -0.31
SDF2-201ENST00000247020 GPN3Q9UHW5 284 aaPredicted RBP13.12□□□□□ -0.31
SDF2-201ENST00000247020 NDRG4Q9ULP0 352 aaKnown RBP13.12□□□□□ -0.31
SDF2-201ENST00000247020 TRIM64A6NGJ6 449 aa13.11□□□□□ -0.31
SDF2-201ENST00000247020 TPST2O60704 377 aa13.11□□□□□ -0.31
SDF2-201ENST00000247020 MITFO75030 526 aaPredicted RBP13.11□□□□□ -0.31
SDF2-201ENST00000247020 CYP7B1O75881 506 aa13.11□□□□□ -0.31
SDF2-201ENST00000247020 CCL4P13236 92 aa13.11□□□□□ -0.31
SDF2-201ENST00000247020 SLC5A2P31639 672 aa13.11□□□□□ -0.31
SDF2-201ENST00000247020 IFNGR2P38484 337 aa13.11□□□□□ -0.31
SDF2-201ENST00000247020 UGT2B15P54855 530 aa13.11□□□□□ -0.31
SDF2-201ENST00000247020 SPEM2Q0P670 501 aa13.11□□□□□ -0.31
SDF2-201ENST00000247020 COX10Q12887 443 aa13.11□□□□□ -0.31
SDF2-201ENST00000247020 EIF3IQ13347 325 aaKnown RBP13.11□□□□□ -0.31
SDF2-201ENST00000247020 PDZK1Q5T2W1 519 aa13.11□□□□□ -0.31
SDF2-201ENST00000247020 DCAF12Q5T6F0 453 aa13.11□□□□□ -0.31
SDF2-201ENST00000247020 HLA-DQA1Q5Y7H0 255 aa13.11□□□□□ -0.31
SDF2-201ENST00000247020 PLEKHM3Q6ZWE6 761 aa13.11□□□□□ -0.31
SDF2-201ENST00000247020 GALNT5Q7Z7M9 940 aa13.11□□□□□ -0.31
SDF2-201ENST00000247020 HMGN2P46Q86SG4 172 aa13.11□□□□□ -0.31
SDF2-201ENST00000247020 ZAR1Q86SH2 424 aa13.11□□□□□ -0.31
SDF2-201ENST00000247020 TSPYL5Q86VY4 417 aaPredicted RBP13.11□□□□□ -0.31
SDF2-201ENST00000247020 PRSS58Q8IYP2 241 aa13.11□□□□□ -0.31
SDF2-201ENST00000247020 ZNF441Q8N8Z8 693 aa13.11□□□□□ -0.31
SDF2-201ENST00000247020 ZNF527Q8NB42 609 aa13.11□□□□□ -0.31
SDF2-201ENST00000247020 AQP11Q8NBQ7 271 aa13.11□□□□□ -0.31
SDF2-201ENST00000247020 B3GNT7Q8NFL0 401 aa13.11□□□□□ -0.31
SDF2-201ENST00000247020 OR9Q2Q8NGE9 314 aa13.11□□□□□ -0.31
SDF2-201ENST00000247020 ADAMTS16Q8TE57 1224 aa13.11□□□□□ -0.31
SDF2-201ENST00000247020 FBLIM1Q8WUP2 373 aa13.11□□□□□ -0.31
SDF2-201ENST00000247020 TP53INP1Q96A56 240 aa13.11□□□□□ -0.31
SDF2-201ENST00000247020 CTRCQ99895 268 aa13.11□□□□□ -0.31
SDF2-201ENST00000247020 DDA1Q9BW61 102 aa13.11□□□□□ -0.31
SDF2-201ENST00000247020 MRPS26Q9BYN8 205 aaKnown RBP13.11□□□□□ -0.31
SDF2-201ENST00000247020 ING2Q9H160 280 aa13.11□□□□□ -0.31
SDF2-201ENST00000247020 SOX17Q9H6I2 414 aaPredicted RBP13.11□□□□□ -0.31
SDF2-201ENST00000247020 SLC35A3Q9Y2D2 325 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms