RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 KCNC4Q03721 635 aa15.79■□□□□ 0.12
CDKN1A-201ENST00000244741 MAPK11Q15759 364 aa15.79■□□□□ 0.12
CDKN1A-201ENST00000244741 TBCEQ15813 527 aaPredicted RBP15.79■□□□□ 0.12
CDKN1A-201ENST00000244741 TIGD6Q17RP2 521 aa15.79■□□□□ 0.12
CDKN1A-201ENST00000244741 FAM199XQ6PEV8 388 aaPredicted RBP15.79■□□□□ 0.12
CDKN1A-201ENST00000244741 SHISA6Q6ZSJ9 500 aa15.79■□□□□ 0.12
CDKN1A-201ENST00000244741 LIN37Q96GY3 246 aaPredicted RBP15.79■□□□□ 0.12
CDKN1A-201ENST00000244741 WDR12Q9GZL7 423 aaKnown RBP15.79■□□□□ 0.12
CDKN1A-201ENST00000244741 SLIRPQ9GZT3 109 aaKnown RBP15.79■□□□□ 0.12
CDKN1A-201ENST00000244741 NMNAT1Q9HAN9 279 aaPredicted RBP15.79■□□□□ 0.12
CDKN1A-201ENST00000244741 FBXO8Q9NRD0 319 aa15.79■□□□□ 0.12
CDKN1A-201ENST00000244741 LYARQ9NX58 379 aaKnown RBP15.79■□□□□ 0.12
CDKN1A-201ENST00000244741 TRPC4Q9UBN4 977 aa15.79■□□□□ 0.12
CDKN1A-201ENST00000244741 MFN2O95140 757 aa15.78■□□□□ 0.12
CDKN1A-201ENST00000244741 NR2F6P10588 404 aa15.78■□□□□ 0.12
CDKN1A-201ENST00000244741 BMP4P12644 408 aa15.78■□□□□ 0.12
CDKN1A-201ENST00000244741 SERPINB10P48595 397 aa15.78■□□□□ 0.12
CDKN1A-201ENST00000244741 TNFRSF17Q02223 184 aa15.78■□□□□ 0.12
CDKN1A-201ENST00000244741 SPDYE7PQ495Y7 208 aa15.78■□□□□ 0.12
CDKN1A-201ENST00000244741 VWA2Q5GFL6 755 aa15.78■□□□□ 0.12
CDKN1A-201ENST00000244741 ARHGAP40Q5TG30 622 aa15.78■□□□□ 0.12
CDKN1A-201ENST00000244741 ZNF770Q6IQ21 691 aaPredicted RBP15.78■□□□□ 0.12
CDKN1A-201ENST00000244741 RHBDD2Q6NTF9 364 aa15.78■□□□□ 0.12
CDKN1A-201ENST00000244741 KLHL17Q6TDP4 642 aa15.78■□□□□ 0.12
CDKN1A-201ENST00000244741 ZHX1-C8orf76Q96EF9 292 aa15.78■□□□□ 0.12
CDKN1A-201ENST00000244741 ARMC7Q9H6L4 198 aa15.78■□□□□ 0.12
CDKN1A-201ENST00000244741 ZNF304Q9HCX3 659 aa15.78■□□□□ 0.12
CDKN1A-201ENST00000244741 IMPAD1Q9NX62 359 aa15.78■□□□□ 0.12
CDKN1A-201ENST00000244741 MS4A12Q9NXJ0 267 aa15.78■□□□□ 0.12
CDKN1A-201ENST00000244741 OSGIN1Q9UJX0 560 aa15.78■□□□□ 0.12
CDKN1A-201ENST00000244741 KCND3Q9UK17 655 aa15.78■□□□□ 0.12
CDKN1A-201ENST00000244741 ZFHX4Q86UP3 3567 aa15.78■□□□□ 0.12
CDKN1A-201ENST00000244741 CCDC88CQ9P219 2028 aa15.78■□□□□ 0.12
CDKN1A-201ENST00000244741 CCDC187A0A096LP49 1063 aa15.77■□□□□ 0.12
CDKN1A-201ENST00000244741 TRBV4-1A0A0J9YWV2 114 aa15.77■□□□□ 0.12
CDKN1A-201ENST00000244741 HMGN4O00479 90 aa15.77■□□□□ 0.12
CDKN1A-201ENST00000244741 CYR61O00622 381 aa15.77■□□□□ 0.12
CDKN1A-201ENST00000244741 SEMA7AO75326 666 aa15.77■□□□□ 0.12
CDKN1A-201ENST00000244741 FEN1P39748 380 aaKnown RBP15.77■□□□□ 0.12
CDKN1A-201ENST00000244741 FRKP42685 505 aaPredicted RBP15.77■□□□□ 0.12
CDKN1A-201ENST00000244741 TEKQ02763 1124 aa15.77■□□□□ 0.12
CDKN1A-201ENST00000244741 ST3GAL4Q11206 333 aa15.77■□□□□ 0.12
CDKN1A-201ENST00000244741 DCAF12Q5T6F0 453 aa15.77■□□□□ 0.12
CDKN1A-201ENST00000244741 FAM69BQ5VUD6 431 aa15.77■□□□□ 0.12
CDKN1A-201ENST00000244741 SNX29P2Q8IUI4 249 aa15.77■□□□□ 0.12
CDKN1A-201ENST00000244741 DOK4Q8TEW6 326 aa15.77■□□□□ 0.12
CDKN1A-201ENST00000244741 S100ZQ8WXG8 99 aa15.77■□□□□ 0.12
CDKN1A-201ENST00000244741 SLC22A11Q9NSA0 550 aa15.77■□□□□ 0.12
CDKN1A-201ENST00000244741 CTSFQ9UBX1 484 aa15.77■□□□□ 0.12
CDKN1A-201ENST00000244741 LAMA5O15230 3695 aa15.77■□□□□ 0.12
CDKN1A-201ENST00000244741 FUOMA2VDF0 154 aa15.77■□□□□ 0.11
CDKN1A-201ENST00000244741 AIREO43918 545 aa15.77■□□□□ 0.11
CDKN1A-201ENST00000244741 FBLP22087 321 aaKnown RBP15.77■□□□□ 0.11
CDKN1A-201ENST00000244741 CHMP24386 653 aa15.77■□□□□ 0.11
CDKN1A-201ENST00000244741 GADD45AP24522 165 aa15.77■□□□□ 0.11
CDKN1A-201ENST00000244741 BUD31P41223 144 aaPredicted RBP15.77■□□□□ 0.11
CDKN1A-201ENST00000244741 BTG2P78543 158 aa15.77■□□□□ 0.11
CDKN1A-201ENST00000244741 IFITM3Q01628 133 aa15.77■□□□□ 0.11
CDKN1A-201ENST00000244741 INAQ16352 499 aa15.77■□□□□ 0.11
CDKN1A-201ENST00000244741 MFSD4BQ5TF39 518 aa15.77■□□□□ 0.11
CDKN1A-201ENST00000244741 STX19Q8N4C7 294 aa15.77■□□□□ 0.11
CDKN1A-201ENST00000244741 NATD1Q8N6N6 113 aa15.77■□□□□ 0.11
CDKN1A-201ENST00000244741 FAIM2Q9BWQ8 316 aa15.77■□□□□ 0.11
CDKN1A-201ENST00000244741 SERHL2Q9H4I8 314 aa15.77■□□□□ 0.11
CDKN1A-201ENST00000244741 LYRM4Q9HD34 91 aa15.77■□□□□ 0.11
CDKN1A-201ENST00000244741 NEUROD4Q9HD90 331 aa15.77■□□□□ 0.11
CDKN1A-201ENST00000244741 FOXJ2Q9P0K8 574 aa15.77■□□□□ 0.11
CDKN1A-201ENST00000244741 PHF11Q9UIL8 331 aa15.77■□□□□ 0.11
CDKN1A-201ENST00000244741 SRPK3Q9UPE1 567 aa15.77■□□□□ 0.11
CDKN1A-201ENST00000244741 ZAR1LA6NP61 321 aa15.76■□□□□ 0.11
CDKN1A-201ENST00000244741 B4E171 279 aa15.76■□□□□ 0.11
CDKN1A-201ENST00000244741 H0YIG0 161 aa15.76■□□□□ 0.11
CDKN1A-201ENST00000244741 PTHP01270 115 aa15.76■□□□□ 0.11
CDKN1A-201ENST00000244741 TSPAN7P41732 249 aa15.76■□□□□ 0.11
CDKN1A-201ENST00000244741 CLK1P49759 484 aaKnown RBP15.76■□□□□ 0.11
CDKN1A-201ENST00000244741 CRISP1P54107 249 aa15.76■□□□□ 0.11
CDKN1A-201ENST00000244741 CRISP3P54108 245 aa15.76■□□□□ 0.11
CDKN1A-201ENST00000244741 TRA2BP62995 288 aaKnown RBP15.76■□□□□ 0.11
CDKN1A-201ENST00000244741 DUSP2Q05923 314 aa15.76■□□□□ 0.11
CDKN1A-201ENST00000244741 COLEC12Q5KU26 742 aa15.76■□□□□ 0.11
CDKN1A-201ENST00000244741 RBM45Q8IUH3 476 aaKnown RBP15.76■□□□□ 0.11
CDKN1A-201ENST00000244741 TAGAPQ8N103 731 aa15.76■□□□□ 0.11
CDKN1A-201ENST00000244741 GALNT6Q8NCL4 622 aa15.76■□□□□ 0.11
CDKN1A-201ENST00000244741 B3GNT7Q8NFL0 401 aa15.76■□□□□ 0.11
CDKN1A-201ENST00000244741 ZNF675Q8TD23 568 aa15.76■□□□□ 0.11
CDKN1A-201ENST00000244741 WFDC6Q9BQY6 131 aa15.76■□□□□ 0.11
CDKN1A-201ENST00000244741 DCSTAMPQ9H295 470 aa15.76■□□□□ 0.11
CDKN1A-201ENST00000244741 ZBTB20Q9HC78 741 aaPredicted RBP15.76■□□□□ 0.11
CDKN1A-201ENST00000244741 ENAMQ9NRM1 1142 aa15.76■□□□□ 0.11
CDKN1A-201ENST00000244741 PRAMEF27A3QJZ7 478 aa15.76■□□□□ 0.11
CDKN1A-201ENST00000244741 ARRDC5A6NEK1 342 aa15.76■□□□□ 0.11
CDKN1A-201ENST00000244741 C9orf172C9J069 976 aa15.76■□□□□ 0.11
CDKN1A-201ENST00000244741 MEN1O00255 615 aa15.76■□□□□ 0.11
CDKN1A-201ENST00000244741 GUCY1B2O75343 617 aa15.76■□□□□ 0.11
CDKN1A-201ENST00000244741 TNFSF15O95150 251 aa15.76■□□□□ 0.11
CDKN1A-201ENST00000244741 ADRA2AP08913 450 aa15.76■□□□□ 0.11
CDKN1A-201ENST00000244741 ADORA3P0DMS8 318 aa15.76■□□□□ 0.11
CDKN1A-201ENST00000244741 RNH1P13489 461 aaKnown RBP15.76■□□□□ 0.11
CDKN1A-201ENST00000244741 POU1F1P28069 291 aa15.76■□□□□ 0.11
CDKN1A-201ENST00000244741 TLX1P31314 330 aaPredicted RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms