RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 FGF22Q9HCT0 170 aa13.43□□□□□ -0.26
HIF3A-202ENST00000244303 COMMD3Q9UBI1 195 aa13.43□□□□□ -0.26
HIF3A-202ENST00000244303 SNX7Q9UNH6 387 aa13.43□□□□□ -0.26
HIF3A-202ENST00000244303 CSNK1G3Q9Y6M4 447 aa13.43□□□□□ -0.26
HIF3A-202ENST00000244303 TRDV1A0A1B0GX56 115 aa13.42□□□□□ -0.26
HIF3A-202ENST00000244303 KLF4O43474 513 aa13.42□□□□□ -0.26
HIF3A-202ENST00000244303 EML2O95834 649 aa13.42□□□□□ -0.26
HIF3A-202ENST00000244303 RACK1P63244 317 aaKnown RBP13.42□□□□□ -0.26
HIF3A-202ENST00000244303 DSG2Q14126 1118 aa13.42□□□□□ -0.26
HIF3A-202ENST00000244303 ZNF791Q3KP31 576 aaPredicted RBP13.42□□□□□ -0.26
HIF3A-202ENST00000244303 PUS10Q3MIT2 529 aaKnown RBP13.42□□□□□ -0.26
HIF3A-202ENST00000244303 ZNF620Q6ZNG0 422 aa13.42□□□□□ -0.26
HIF3A-202ENST00000244303 MBOAT2Q6ZWT7 520 aa13.42□□□□□ -0.26
HIF3A-202ENST00000244303 AMIGO1Q86WK6 493 aa13.42□□□□□ -0.26
HIF3A-202ENST00000244303 UBE2J2Q8N2K1 259 aa13.42□□□□□ -0.26
HIF3A-202ENST00000244303 ATP6V1C2Q8NEY4 427 aa13.42□□□□□ -0.26
HIF3A-202ENST00000244303 MRPL38Q96DV4 380 aaKnown RBP13.42□□□□□ -0.26
HIF3A-202ENST00000244303 MS4A4EQ96PG1 132 aa13.42□□□□□ -0.26
HIF3A-202ENST00000244303 ZNF649Q9BS31 505 aa13.42□□□□□ -0.26
HIF3A-202ENST00000244303 HDHD5Q9BXW7 423 aa13.42□□□□□ -0.26
HIF3A-202ENST00000244303 KIR3DX1Q9H7L2 352 aa13.42□□□□□ -0.26
HIF3A-202ENST00000244303 TRIM45Q9H8W5 580 aaPredicted RBP13.42□□□□□ -0.26
HIF3A-202ENST00000244303 WDR70Q9NW82 654 aa13.42□□□□□ -0.26
HIF3A-202ENST00000244303 CCDC182A6NF36 153 aa13.42□□□□□ -0.26
HIF3A-202ENST00000244303 DUXAA6NLW8 204 aa13.42□□□□□ -0.26
HIF3A-202ENST00000244303 AGRPO00253 132 aa13.42□□□□□ -0.26
HIF3A-202ENST00000244303 CDC42EP2O14613 210 aa13.42□□□□□ -0.26
HIF3A-202ENST00000244303 KCNJ13O60928 360 aa13.42□□□□□ -0.26
HIF3A-202ENST00000244303 RNGTTO60942 597 aaKnown RBP13.42□□□□□ -0.26
HIF3A-202ENST00000244303 CELP19835 753 aa13.42□□□□□ -0.26
HIF3A-202ENST00000244303 INSL4Q14641 139 aa13.42□□□□□ -0.26
HIF3A-202ENST00000244303 CDK10Q15131 360 aa13.42□□□□□ -0.26
HIF3A-202ENST00000244303 TBRG1Q3YBR2 411 aa13.42□□□□□ -0.26
HIF3A-202ENST00000244303 SLC35F1Q5T1Q4 408 aa13.42□□□□□ -0.26
HIF3A-202ENST00000244303 CDC73Q6P1J9 531 aa13.42□□□□□ -0.26
HIF3A-202ENST00000244303 ZNF836Q6ZNA1 936 aa13.42□□□□□ -0.26
HIF3A-202ENST00000244303 PAQR7Q86WK9 346 aa13.42□□□□□ -0.26
HIF3A-202ENST00000244303 OR4N5Q8IXE1 308 aa13.42□□□□□ -0.26
HIF3A-202ENST00000244303 LRRC25Q8N386 305 aaPredicted RBP13.42□□□□□ -0.26
HIF3A-202ENST00000244303 ARIH2OSQ8N7S6 290 aa13.42□□□□□ -0.26
HIF3A-202ENST00000244303 LCN9Q8WX39 176 aa13.42□□□□□ -0.26
HIF3A-202ENST00000244303 GAL3ST3Q96A11 431 aa13.42□□□□□ -0.26
HIF3A-202ENST00000244303 TEX12Q9BXU0 123 aa13.42□□□□□ -0.26
HIF3A-202ENST00000244303 CBLCQ9ULV8 474 aa13.42□□□□□ -0.26
HIF3A-202ENST00000244303 SLC7A7Q9UM01 511 aa13.42□□□□□ -0.26
HIF3A-202ENST00000244303 EXOGQ9Y2C4 368 aaKnown RBP13.42□□□□□ -0.26
HIF3A-202ENST00000244303 COLEC10Q9Y6Z7 277 aa13.42□□□□□ -0.26
HIF3A-202ENST00000244303 CENPVL1A0A0U1RR11 272 aa13.41□□□□□ -0.26
HIF3A-202ENST00000244303 SHISA3A0PJX4 238 aa13.41□□□□□ -0.26
HIF3A-202ENST00000244303 GSAPA4D1B5 854 aa13.41□□□□□ -0.26
HIF3A-202ENST00000244303 SOCS6O14544 535 aa13.41□□□□□ -0.26
HIF3A-202ENST00000244303 SLC31A1O15431 190 aa13.41□□□□□ -0.26
HIF3A-202ENST00000244303 SEC14L5O43304 696 aa13.41□□□□□ -0.26
HIF3A-202ENST00000244303 PLRG1O43660 514 aaKnown RBP13.41□□□□□ -0.26
HIF3A-202ENST00000244303 NCR1O76036 304 aa13.41□□□□□ -0.26
HIF3A-202ENST00000244303 OR5F1O95221 314 aa13.41□□□□□ -0.26
HIF3A-202ENST00000244303 CSF2P04141 144 aa13.41□□□□□ -0.26
HIF3A-202ENST00000244303 DDOSTP39656 456 aa13.41□□□□□ -0.26
HIF3A-202ENST00000244303 RPS5P46782 204 aaKnown RBP13.41□□□□□ -0.26
HIF3A-202ENST00000244303 TMEM196Q5HYL7 178 aa13.41□□□□□ -0.26
HIF3A-202ENST00000244303 PRR23CQ6ZRP0 262 aa13.41□□□□□ -0.26
HIF3A-202ENST00000244303 KLHL36Q8N4N3 616 aa13.41□□□□□ -0.26
HIF3A-202ENST00000244303 SPRYD4Q8WW59 207 aaPredicted RBP13.41□□□□□ -0.26
HIF3A-202ENST00000244303 KIAA1143Q96AT1 154 aaPredicted RBP13.41□□□□□ -0.26
HIF3A-202ENST00000244303 SAMD8Q96LT4 415 aa13.41□□□□□ -0.26
HIF3A-202ENST00000244303 SECISBP2Q96T21 854 aaKnown RBP13.41□□□□□ -0.26
HIF3A-202ENST00000244303 TMEM246Q9BRR3 403 aa13.41□□□□□ -0.26
HIF3A-202ENST00000244303 TTYH2Q9BSA4 534 aa13.41□□□□□ -0.26
HIF3A-202ENST00000244303 TBC1D29Q9UFV1 150 aa13.41□□□□□ -0.26
HIF3A-202ENST00000244303 NDRG2Q9UN36 371 aaKnown RBP13.41□□□□□ -0.26
HIF3A-202ENST00000244303 WDR45Q9Y484 360 aa13.41□□□□□ -0.26
HIF3A-202ENST00000244303 FAM183AA6NL82 134 aa13.41□□□□□ -0.26
HIF3A-202ENST00000244303 GABRPO00591 440 aa13.41□□□□□ -0.26
HIF3A-202ENST00000244303 PLA2G10O15496 165 aa13.41□□□□□ -0.26
HIF3A-202ENST00000244303 AKAP8O43823 692 aaKnown RBP13.41□□□□□ -0.26
HIF3A-202ENST00000244303 HPGDSO60760 199 aa13.41□□□□□ -0.26
HIF3A-202ENST00000244303 IGHA1P01876 353 aa13.41□□□□□ -0.26
HIF3A-202ENST00000244303 CPN2P22792 545 aa13.41□□□□□ -0.26
HIF3A-202ENST00000244303 APEX1P27695 318 aaKnown RBP13.41□□□□□ -0.26
HIF3A-202ENST00000244303 HTR1FP30939 366 aa13.41□□□□□ -0.26
HIF3A-202ENST00000244303 NTSR1P30989 418 aa13.41□□□□□ -0.26
HIF3A-202ENST00000244303 ATP6V1E1P36543 226 aa13.41□□□□□ -0.26
HIF3A-202ENST00000244303 PPP3R1P63098 170 aa13.41□□□□□ -0.26
HIF3A-202ENST00000244303 TNFRSF17Q02223 184 aa13.41□□□□□ -0.26
HIF3A-202ENST00000244303 RGS1Q08116 209 aa13.41□□□□□ -0.26
HIF3A-202ENST00000244303 TMEM44Q2T9K0 475 aa13.41□□□□□ -0.26
HIF3A-202ENST00000244303 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.41□□□□□ -0.26
HIF3A-202ENST00000244303 ASPGQ86U10 573 aa13.41□□□□□ -0.26
HIF3A-202ENST00000244303 MARCH9Q86YJ5 346 aa13.41□□□□□ -0.26
HIF3A-202ENST00000244303 RDH10Q8IZV5 341 aa13.41□□□□□ -0.26
HIF3A-202ENST00000244303 VWA5B2Q8N398 1253 aa13.41□□□□□ -0.26
HIF3A-202ENST00000244303 SIRT6Q8N6T7 355 aa13.41□□□□□ -0.26
HIF3A-202ENST00000244303 OR2T33Q8NG76 320 aa13.41□□□□□ -0.26
HIF3A-202ENST00000244303 ZCCHC10Q8TBK6 192 aa13.41□□□□□ -0.26
HIF3A-202ENST00000244303 OTULINQ96BN8 352 aa13.41□□□□□ -0.26
HIF3A-202ENST00000244303 MTHFD2LQ9H903 347 aaPredicted RBP13.41□□□□□ -0.26
HIF3A-202ENST00000244303 SLC28A3Q9HAS3 691 aa13.41□□□□□ -0.26
HIF3A-202ENST00000244303 HINT3Q9NQE9 182 aaKnown RBP13.41□□□□□ -0.26
HIF3A-202ENST00000244303 MED17Q9NVC6 651 aa13.41□□□□□ -0.26
HIF3A-202ENST00000244303 NLGN3Q9NZ94 848 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms