RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 A0A1W2PQ09 198 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 TIMM8AO60220 97 aaPredicted RBP10.53□□□□□ -0.72
MSH6-201ENST00000234420 CDK4P11802 303 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 GABRR1P24046 479 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 SLC6A6P31641 620 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 HSD11B2P80365 405 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 OR10K2Q6IF99 312 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 HS3ST5Q8IZT8 346 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 OR10K1Q8NGX5 313 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 C1QTNF6Q9BXI9 259 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 ZIM2Q9NZV7 527 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 USP36Q9P275 1121 aaKnown RBP10.53□□□□□ -0.72
MSH6-201ENST00000234420 F5H5K5 113 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 PI15O43692 258 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 NIPSNAP2O75323 286 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 MRPS34P82930 218 aaKnown RBP10.53□□□□□ -0.72
MSH6-201ENST00000234420 DUSP6Q16828 381 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 UNQ6126/PRO20091Q6UXV3 157 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 OR4C15Q8NGM1 316 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 ZDHHC11Q9H8X9 412 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 KCNIP2Q9NS61 270 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 H7BY64 318 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 SLC31A2O15432 143 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 MITFO75030 526 aaPredicted RBP10.53□□□□□ -0.72
MSH6-201ENST00000234420 RAB3AP20336 220 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 NSG1P42857 185 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 CXCL12P48061 93 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 LGALS4P56470 323 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 EVX2Q03828 476 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 RAB31Q13636 194 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 SHFQ7M4L6 423 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 OR13C4Q8NGS5 318 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 THAP4Q8WY91 577 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 SMPDL3AQ92484 453 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 PRAP1Q96NZ9 151 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 NPFFR2Q9Y5X5 522 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 ROBO1Q9Y6N7 1651 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 PCM1Q15154 2024 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 A6NIN4 97 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 SIX6O95475 246 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 C8GP07360 202 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 HLCSP50747 726 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 ACTBP60709 375 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 ACTG1P63261 375 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 ATP6AP1Q15904 470 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 TATDN3Q17R31 274 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 C10orf62Q5T681 223 aaPredicted RBP10.53□□□□□ -0.72
MSH6-201ENST00000234420 AGAP7PQ5VUJ5 663 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 AGAP6Q5VW22 663 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 ZSWIM9Q86XI8 627 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 PLXDC1Q8IUK5 500 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 RAB39BQ96DA2 213 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 AGAP4Q96P64 663 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 SLC19A3Q9BZV2 496 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 MINDY3Q9H8M7 445 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 ASB4Q9Y574 426 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 A0A1W2PP18 115 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 GJB5O95377 273 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 ACPPP15309 386 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 ARL2P36404 184 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 TAGLN2P37802 199 aaKnown RBP10.53□□□□□ -0.72
MSH6-201ENST00000234420 FCRLBQ6BAA4 426 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 EPGNQ6UW88 154 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 TMEM107Q6UX40 140 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 DNAJC5GQ8N7S2 189 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 WFIKKN2Q8TEU8 576 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 FAM46BQ96A09 425 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 MUCL1Q96DR8 90 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 EFCAB11Q9BUY7 163 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 FOXQ1Q9C009 403 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 OSGIN2Q9Y236 505 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 ARL2-SNX15V9GYD0 113 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 ATRNL1Q5VV63 1379 aa10.52□□□□□ -0.72
MSH6-201ENST00000234420 G3V3Y1 287 aa10.52□□□□□ -0.72
MSH6-201ENST00000234420 ADAM12O43184 909 aa10.52□□□□□ -0.72
MSH6-201ENST00000234420 LRRTM2O43300 516 aa10.52□□□□□ -0.72
MSH6-201ENST00000234420 MT-ND4P03905 459 aa10.52□□□□□ -0.72
MSH6-201ENST00000234420 GIFP27352 417 aa10.52□□□□□ -0.72
MSH6-201ENST00000234420 AIF1P55008 147 aa10.52□□□□□ -0.72
MSH6-201ENST00000234420 TAC4Q86UU9 113 aa10.52□□□□□ -0.72
MSH6-201ENST00000234420 RBPMSQ93062 196 aaKnown RBP10.52□□□□□ -0.72
MSH6-201ENST00000234420 INTS14Q96SY0 518 aa10.52□□□□□ -0.72
MSH6-201ENST00000234420 SYT3Q9BQG1 590 aa10.52□□□□□ -0.72
MSH6-201ENST00000234420 INO80Q9ULG1 1556 aaPredicted RBP10.52□□□□□ -0.72
MSH6-201ENST00000234420 A0A1W2PQU0 124 aa10.52□□□□□ -0.72
MSH6-201ENST00000234420 UNCXA6NJT0 531 aa10.52□□□□□ -0.72
MSH6-201ENST00000234420 FTCDNL1E5RQL4 147 aa10.52□□□□□ -0.72
MSH6-201ENST00000234420 VEGFDO43915 354 aa10.52□□□□□ -0.72
MSH6-201ENST00000234420 DFFBO76075 338 aa10.52□□□□□ -0.72
MSH6-201ENST00000234420 NXPH3O95157 252 aa10.52□□□□□ -0.72
MSH6-201ENST00000234420 G6PDP11413 515 aa10.52□□□□□ -0.72
MSH6-201ENST00000234420 PAX6P26367 422 aa10.52□□□□□ -0.72
MSH6-201ENST00000234420 ADGRF1Q5T601 910 aa10.52□□□□□ -0.72
MSH6-201ENST00000234420 PTCRAQ6ISU1 281 aaPredicted RBP10.52□□□□□ -0.72
MSH6-201ENST00000234420 LRRC55Q6ZSA7 311 aa10.52□□□□□ -0.72
MSH6-201ENST00000234420 GINS3Q9BRX5 216 aa10.52□□□□□ -0.72
MSH6-201ENST00000234420 SIAEQ9HAT2 523 aa10.52□□□□□ -0.72
MSH6-201ENST00000234420 SARDHQ9UL12 918 aa10.52□□□□□ -0.72
MSH6-201ENST00000234420 A0A0B4J2A0 478 aa10.52□□□□□ -0.73
MSH6-201ENST00000234420 A0A1W2PPV4 95 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms