RNA–Protein interactions for RNA: ENST00000226247.2

FOXN1-201, Transcript of forkhead box N1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN1, Length 3,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1-201ENST00000226247 CKMP06732 381 aa9.7□□□□□ -0.86
FOXN1-201ENST00000226247 MYOGP15173 224 aa9.7□□□□□ -0.86
FOXN1-201ENST00000226247 SLC6A1P30531 599 aa9.7□□□□□ -0.86
FOXN1-201ENST00000226247 TMEM220Q6QAJ8 160 aa9.7□□□□□ -0.86
FOXN1-201ENST00000226247 ARL9Q6T311 187 aa9.7□□□□□ -0.86
FOXN1-201ENST00000226247 LYPD4Q6UWN0 246 aa9.7□□□□□ -0.86
FOXN1-201ENST00000226247 HSD11B1LQ7Z5J1 315 aa9.7□□□□□ -0.86
FOXN1-201ENST00000226247 NR2C2APQ86WQ0 139 aa9.7□□□□□ -0.86
FOXN1-201ENST00000226247 PDXPQ96GD0 296 aa9.7□□□□□ -0.86
FOXN1-201ENST00000226247 FAM46AQ96IP4 442 aaKnown RBP9.7□□□□□ -0.86
FOXN1-201ENST00000226247 F2RL3Q96RI0 385 aa9.7□□□□□ -0.86
FOXN1-201ENST00000226247 ABHD1Q96SE0 405 aa9.7□□□□□ -0.86
FOXN1-201ENST00000226247 ARHGAP9Q9BRR9 750 aa9.7□□□□□ -0.86
FOXN1-201ENST00000226247 IER2Q9BTL4 223 aa9.7□□□□□ -0.86
FOXN1-201ENST00000226247 CRB3Q9BUF7 120 aa9.7□□□□□ -0.86
FOXN1-201ENST00000226247 CACNG6Q9BXT2 260 aa9.7□□□□□ -0.86
FOXN1-201ENST00000226247 FXYD6Q9H0Q3 95 aa9.7□□□□□ -0.86
FOXN1-201ENST00000226247 SMG9Q9H0W8 520 aaKnown RBP9.7□□□□□ -0.86
FOXN1-201ENST00000226247 MTG2Q9H4K7 406 aa9.7□□□□□ -0.86
FOXN1-201ENST00000226247 CUEDC1Q9NWM3 386 aaPredicted RBP9.7□□□□□ -0.86
FOXN1-201ENST00000226247 H2AFY2Q9P0M6 372 aaPredicted RBP9.7□□□□□ -0.86
FOXN1-201ENST00000226247 CXXC1Q9P0U4 656 aaPredicted RBP9.7□□□□□ -0.86
FOXN1-201ENST00000226247 FLVCR2Q9UPI3 526 aa9.7□□□□□ -0.86
FOXN1-201ENST00000226247 RASD1Q9Y272 281 aa9.7□□□□□ -0.86
FOXN1-201ENST00000226247 Q9Y3F1 56 aa9.7□□□□□ -0.86
FOXN1-201ENST00000226247 OR10H1Q9Y4A9 318 aa9.7□□□□□ -0.86
FOXN1-201ENST00000226247 TNRC18O15417 2968 aaPredicted RBP9.7□□□□□ -0.86
FOXN1-201ENST00000226247 NPIPB8E9PQR5 432 aa9.69□□□□□ -0.86
FOXN1-201ENST00000226247 PRODHO43272 600 aa9.69□□□□□ -0.86
FOXN1-201ENST00000226247 UGDHO60701 494 aa9.69□□□□□ -0.86
FOXN1-201ENST00000226247 ZNF821O75541 412 aaPredicted RBP9.69□□□□□ -0.86
FOXN1-201ENST00000226247 NPPBP16860 134 aa9.69□□□□□ -0.86
FOXN1-201ENST00000226247 HMGA1P17096 107 aaKnown RBP9.69□□□□□ -0.86
FOXN1-201ENST00000226247 UQCRC2P22695 453 aa9.69□□□□□ -0.86
FOXN1-201ENST00000226247 SNRPD1P62314 119 aaKnown RBP9.69□□□□□ -0.86
FOXN1-201ENST00000226247 RBMS2Q15434 407 aaKnown RBP9.69□□□□□ -0.86
FOXN1-201ENST00000226247 C3orf38Q5JPI3 329 aa9.69□□□□□ -0.86
FOXN1-201ENST00000226247 FAM71E1Q6IPT2 247 aa9.69□□□□□ -0.86
FOXN1-201ENST00000226247 SLC27A4Q6P1M0 643 aa9.69□□□□□ -0.86
FOXN1-201ENST00000226247 TRMT11Q7Z4G4 463 aaKnown RBP9.69□□□□□ -0.86
FOXN1-201ENST00000226247 CAMKMTQ7Z624 323 aa9.69□□□□□ -0.86
FOXN1-201ENST00000226247 GPALPP1Q8IXQ4 340 aa9.69□□□□□ -0.86
FOXN1-201ENST00000226247 AUTS2Q8WXX7 1259 aa9.69□□□□□ -0.86
FOXN1-201ENST00000226247 FBXO17Q96EF6 278 aa9.69□□□□□ -0.86
FOXN1-201ENST00000226247 ZC3HAV1LQ96H79 300 aaKnown RBP9.69□□□□□ -0.86
FOXN1-201ENST00000226247 ERMAPQ96PL5 475 aaPredicted RBP9.69□□□□□ -0.86
FOXN1-201ENST00000226247 ZNF607Q96SK3 696 aa9.69□□□□□ -0.86
FOXN1-201ENST00000226247 KCNJ15Q99712 375 aa9.69□□□□□ -0.86
FOXN1-201ENST00000226247 SLC6A15Q9H2J7 730 aa9.69□□□□□ -0.86
FOXN1-201ENST00000226247 CWH43Q9H720 699 aa9.69□□□□□ -0.86
FOXN1-201ENST00000226247 CACNG2Q9Y698 323 aa9.69□□□□□ -0.86
FOXN1-201ENST00000226247 DNAH14Q0VDD8 3507 aa9.69□□□□□ -0.86
FOXN1-201ENST00000226247 VWA8A3KMH1 1905 aa9.69□□□□□ -0.86
FOXN1-201ENST00000226247 HELZP42694 1942 aaKnown RBP9.69□□□□□ -0.86
FOXN1-201ENST00000226247 TRDV1A0A1B0GX56 115 aa9.69□□□□□ -0.86
FOXN1-201ENST00000226247 CPSF4LA6NMK7 179 aaKnown RBP9.69□□□□□ -0.86
FOXN1-201ENST00000226247 PTP4A3O75365 173 aa9.69□□□□□ -0.86
FOXN1-201ENST00000226247 RAB3AP20336 220 aa9.69□□□□□ -0.86
FOXN1-201ENST00000226247 CENPAP49450 140 aa9.69□□□□□ -0.86
FOXN1-201ENST00000226247 SLC3A1Q07837 685 aa9.69□□□□□ -0.86
FOXN1-201ENST00000226247 RAB40BQ12829 278 aa9.69□□□□□ -0.86
FOXN1-201ENST00000226247 SP140Q13342 867 aa9.69□□□□□ -0.86
FOXN1-201ENST00000226247 RIN1Q13671 783 aa9.69□□□□□ -0.86
FOXN1-201ENST00000226247 CLLU1Q5K131 121 aa9.69□□□□□ -0.86
FOXN1-201ENST00000226247 FAM74A1Q5RGS3 127 aa9.69□□□□□ -0.86
FOXN1-201ENST00000226247 SLC36A4Q6YBV0 504 aa9.69□□□□□ -0.86
FOXN1-201ENST00000226247 ADGRF3Q8IZF5 1079 aa9.69□□□□□ -0.86
FOXN1-201ENST00000226247 GOT1L1Q8NHS2 421 aaPredicted RBP9.69□□□□□ -0.86
FOXN1-201ENST00000226247 GIMAP1Q8WWP7 306 aa9.69□□□□□ -0.86
FOXN1-201ENST00000226247 LRRC46Q96FV0 321 aa9.69□□□□□ -0.86
FOXN1-201ENST00000226247 ZNF354BQ96LW1 612 aa9.69□□□□□ -0.86
FOXN1-201ENST00000226247 GPR137Q96N19 417 aa9.69□□□□□ -0.86
FOXN1-201ENST00000226247 MED18Q9BUE0 208 aa9.69□□□□□ -0.86
FOXN1-201ENST00000226247 DDX31Q9H8H2 851 aaKnown RBP9.69□□□□□ -0.86
FOXN1-201ENST00000226247 DMRT3Q9NQL9 472 aa9.69□□□□□ -0.86
FOXN1-201ENST00000226247 TDP1Q9NUW8 608 aa9.69□□□□□ -0.86
FOXN1-201ENST00000226247 MARCH5Q9NX47 278 aa9.69□□□□□ -0.86
FOXN1-201ENST00000226247 A4GNTQ9UNA3 340 aa9.69□□□□□ -0.86
FOXN1-201ENST00000226247 IRAK3Q9Y616 596 aa9.69□□□□□ -0.86
FOXN1-201ENST00000226247 PLXND1Q9Y4D7 1925 aa9.69□□□□□ -0.86
FOXN1-201ENST00000226247 AGAP14A8MT82 685 aa9.69□□□□□ -0.86
FOXN1-201ENST00000226247 F8W036 122 aa9.69□□□□□ -0.86
FOXN1-201ENST00000226247 STK25O00506 426 aa9.69□□□□□ -0.86
FOXN1-201ENST00000226247 OR5F1O95221 314 aa9.69□□□□□ -0.86
FOXN1-201ENST00000226247 EOMESO95936 686 aa9.69□□□□□ -0.86
FOXN1-201ENST00000226247 GNRH1P01148 92 aa9.69□□□□□ -0.86
FOXN1-201ENST00000226247 TCRBP04435 133 aa9.69□□□□□ -0.86
FOXN1-201ENST00000226247 URODP06132 367 aa9.69□□□□□ -0.86
FOXN1-201ENST00000226247 HSD3B1P14060 373 aa9.69□□□□□ -0.86
FOXN1-201ENST00000226247 GNSP15586 552 aa9.69□□□□□ -0.86
FOXN1-201ENST00000226247 HSD3B2P26439 372 aa9.69□□□□□ -0.86
FOXN1-201ENST00000226247 STXBP1P61764 594 aaKnown RBP9.69□□□□□ -0.86
FOXN1-201ENST00000226247 OPCMLQ14982 345 aa9.69□□□□□ -0.86
FOXN1-201ENST00000226247 COL28A1Q2UY09 1125 aa9.69□□□□□ -0.86
FOXN1-201ENST00000226247 C3P1Q6ZMU1 363 aa9.69□□□□□ -0.86
FOXN1-201ENST00000226247 MAMSTRQ6ZN01 415 aa9.69□□□□□ -0.86
FOXN1-201ENST00000226247 PRSS45Q7RTY3 260 aa9.69□□□□□ -0.86
FOXN1-201ENST00000226247 LRRTM4Q86VH4 590 aa9.69□□□□□ -0.86
FOXN1-201ENST00000226247 ADGRG3Q86Y34 549 aa9.69□□□□□ -0.86
FOXN1-201ENST00000226247 TOMM5Q8N4H5 51 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms