RNA–Protein interactions for RNA: ENST00000223127.7

PLOD3-201, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PLOD3, Length 2,920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-201ENST00000223127 CDK6Q00534 326 aa12.25□□□□□ -0.45
PLOD3-201ENST00000223127 MAB21L1Q13394 359 aa12.25□□□□□ -0.45
PLOD3-201ENST00000223127 SMAD2Q15796 467 aaKnown RBP12.25□□□□□ -0.45
PLOD3-201ENST00000223127 NDUFAF5Q5TEU4 345 aa12.25□□□□□ -0.45
PLOD3-201ENST00000223127 PTCRAQ6ISU1 281 aaPredicted RBP12.25□□□□□ -0.45
PLOD3-201ENST00000223127 CNIH2Q6PI25 160 aa12.25□□□□□ -0.45
PLOD3-201ENST00000223127 TAF8Q7Z7C8 310 aa12.25□□□□□ -0.45
PLOD3-201ENST00000223127 KCT2Q8NC54 265 aa12.25□□□□□ -0.45
PLOD3-201ENST00000223127 OR52P1PQ8NH57 321 aa12.25□□□□□ -0.45
PLOD3-201ENST00000223127 HLA-CQ95604 372 aa12.25□□□□□ -0.45
PLOD3-201ENST00000223127 MTERF3Q96E29 417 aa12.25□□□□□ -0.45
PLOD3-201ENST00000223127 PITHD1Q9GZP4 211 aaPredicted RBP12.25□□□□□ -0.45
PLOD3-201ENST00000223127 TMEM38AQ9H6F2 299 aa12.25□□□□□ -0.45
PLOD3-201ENST00000223127 PPP1R3EQ9H7J1 279 aa12.25□□□□□ -0.45
PLOD3-201ENST00000223127 EIF3KQ9UBQ5 218 aaKnown RBP12.25□□□□□ -0.45
PLOD3-201ENST00000223127 FBXW2Q9UKT8 454 aa12.25□□□□□ -0.45
PLOD3-201ENST00000223127 HS3ST3A1Q9Y663 406 aa12.25□□□□□ -0.45
PLOD3-201ENST00000223127 TDRD6O60522 2096 aaKnown RBP12.25□□□□□ -0.45
PLOD3-201ENST00000223127 CDK2AP1O14519 115 aa12.25□□□□□ -0.45
PLOD3-201ENST00000223127 PDPK1O15530 556 aa12.25□□□□□ -0.45
PLOD3-201ENST00000223127 LYRM1O43325 122 aa12.25□□□□□ -0.45
PLOD3-201ENST00000223127 SCO1O75880 301 aa12.25□□□□□ -0.45
PLOD3-201ENST00000223127 LIM2P55344 173 aa12.25□□□□□ -0.45
PLOD3-201ENST00000223127 PCBP3P57721 371 aaKnown RBP12.25□□□□□ -0.45
PLOD3-201ENST00000223127 SEC23BQ15437 767 aa12.25□□□□□ -0.45
PLOD3-201ENST00000223127 CRB2Q5IJ48 1285 aa12.25□□□□□ -0.45
PLOD3-201ENST00000223127 RNLSQ5VYX0 342 aa12.25□□□□□ -0.45
PLOD3-201ENST00000223127 ZNF730Q6ZMV8 503 aa12.25□□□□□ -0.45
PLOD3-201ENST00000223127 Q8N402 240 aa12.25□□□□□ -0.45
PLOD3-201ENST00000223127 C19orf18Q8NEA5 215 aa12.25□□□□□ -0.45
PLOD3-201ENST00000223127 TTLQ8NG68 377 aa12.25□□□□□ -0.45
PLOD3-201ENST00000223127 GOT1L1Q8NHS2 421 aaPredicted RBP12.25□□□□□ -0.45
PLOD3-201ENST00000223127 MS4A6EQ96DS6 147 aa12.25□□□□□ -0.45
PLOD3-201ENST00000223127 C1GALT1Q9NS00 363 aa12.25□□□□□ -0.45
PLOD3-201ENST00000223127 RPL36Q9Y3U8 105 aaKnown RBP12.25□□□□□ -0.45
PLOD3-201ENST00000223127 LOC102723532A0A0G2JNH3 316 aa12.24□□□□□ -0.45
PLOD3-201ENST00000223127 ERAL1O75616 437 aaKnown RBP12.24□□□□□ -0.45
PLOD3-201ENST00000223127 CTSEP14091 401 aa12.24□□□□□ -0.45
PLOD3-201ENST00000223127 CERS1P27544 350 aa12.24□□□□□ -0.45
PLOD3-201ENST00000223127 ETV5P41161 510 aa12.24□□□□□ -0.45
PLOD3-201ENST00000223127 ETV1P50549 477 aa12.24□□□□□ -0.45
PLOD3-201ENST00000223127 LRRC74AQ0VAA2 488 aa12.24□□□□□ -0.45
PLOD3-201ENST00000223127 EIF2B5Q13144 721 aaKnown RBP12.24□□□□□ -0.45
PLOD3-201ENST00000223127 SPDYE7PQ495Y7 208 aa12.24□□□□□ -0.45
PLOD3-201ENST00000223127 TNFAIP8L2Q6P589 184 aaPredicted RBP12.24□□□□□ -0.45
PLOD3-201ENST00000223127 TCEANCQ8N8B7 351 aa12.24□□□□□ -0.45
PLOD3-201ENST00000223127 OR52I1Q8NGK6 324 aa12.24□□□□□ -0.45
PLOD3-201ENST00000223127 KCTD7Q96MP8 289 aa12.24□□□□□ -0.45
PLOD3-201ENST00000223127 SOSTQ9BQB4 213 aa12.24□□□□□ -0.45
PLOD3-201ENST00000223127 MED18Q9BUE0 208 aa12.24□□□□□ -0.45
PLOD3-201ENST00000223127 DDX31Q9H8H2 851 aaKnown RBP12.24□□□□□ -0.45
PLOD3-201ENST00000223127 PCOLCE2Q9UKZ9 415 aa12.24□□□□□ -0.45
PLOD3-201ENST00000223127 RAB23Q9ULC3 237 aa12.24□□□□□ -0.45
PLOD3-201ENST00000223127 SPIN1Q9Y657 262 aaPredicted RBP12.24□□□□□ -0.45
PLOD3-201ENST00000223127 A0A0A6YYD5 115 aa12.24□□□□□ -0.45
PLOD3-201ENST00000223127 FAM240BA0A1B0GVZ2 78 aa12.24□□□□□ -0.45
PLOD3-201ENST00000223127 FAM170BA6NMN3 283 aa12.24□□□□□ -0.45
PLOD3-201ENST00000223127 STK25O00506 426 aa12.24□□□□□ -0.45
PLOD3-201ENST00000223127 PLOD3O60568 738 aa12.24□□□□□ -0.45
PLOD3-201ENST00000223127 TSC22D2O75157 780 aa12.24□□□□□ -0.45
PLOD3-201ENST00000223127 IFNW1P05000 195 aa12.24□□□□□ -0.45
PLOD3-201ENST00000223127 PRKAR1AP10644 381 aa12.24□□□□□ -0.45
PLOD3-201ENST00000223127 PVRP15151 417 aa12.24□□□□□ -0.45
PLOD3-201ENST00000223127 PPP3R1P63098 170 aa12.24□□□□□ -0.45
PLOD3-201ENST00000223127 SNRPNP63162 240 aaKnown RBP12.24□□□□□ -0.45
PLOD3-201ENST00000223127 ZNF750Q32MQ0 723 aa12.24□□□□□ -0.45
PLOD3-201ENST00000223127 CCNJQ5T5M9 372 aa12.24□□□□□ -0.45
PLOD3-201ENST00000223127 MZT2BQ6NZ67 158 aa12.24□□□□□ -0.45
PLOD3-201ENST00000223127 TBC1D19Q8N5T2 526 aa12.24□□□□□ -0.45
PLOD3-201ENST00000223127 ACOT4Q8N9L9 421 aa12.24□□□□□ -0.45
PLOD3-201ENST00000223127 OMA1Q96E52 524 aa12.24□□□□□ -0.45
PLOD3-201ENST00000223127 MARVELD1Q9BSK0 173 aa12.24□□□□□ -0.45
PLOD3-201ENST00000223127 NLNQ9BYT8 704 aa12.24□□□□□ -0.45
PLOD3-201ENST00000223127 COMMD3Q9UBI1 195 aa12.24□□□□□ -0.45
PLOD3-201ENST00000223127 APOBEC3BQ9UH17 382 aaKnown RBP12.24□□□□□ -0.45
PLOD3-201ENST00000223127 FBXL21Q9UKT6 434 aa12.24□□□□□ -0.45
PLOD3-201ENST00000223127 ATG4BQ9Y4P1 393 aa12.24□□□□□ -0.45
PLOD3-201ENST00000223127 HPGDSO60760 199 aa12.24□□□□□ -0.45
PLOD3-201ENST00000223127 C8orf89P0DMQ9 161 aa12.24□□□□□ -0.45
PLOD3-201ENST00000223127 ARAFP10398 606 aa12.24□□□□□ -0.45
PLOD3-201ENST00000223127 HIST1H1TP22492 207 aaPredicted RBP12.24□□□□□ -0.45
PLOD3-201ENST00000223127 FZD2Q14332 565 aa12.24□□□□□ -0.45
PLOD3-201ENST00000223127 SLC9A5Q14940 896 aa12.24□□□□□ -0.45
PLOD3-201ENST00000223127 ZBTB37Q5TC79 503 aa12.24□□□□□ -0.45
PLOD3-201ENST00000223127 ZNF425Q6IV72 752 aa12.24□□□□□ -0.45
PLOD3-201ENST00000223127 TRIM40Q6P9F5 258 aa12.24□□□□□ -0.45
PLOD3-201ENST00000223127 ABHD17CQ6PCB6 329 aa12.24□□□□□ -0.45
PLOD3-201ENST00000223127 QSOX2Q6ZRP7 698 aa12.24□□□□□ -0.45
PLOD3-201ENST00000223127 IQCF1Q8N6M8 205 aa12.24□□□□□ -0.45
PLOD3-201ENST00000223127 SLC37A2Q8TED4 501 aa12.24□□□□□ -0.45
PLOD3-201ENST00000223127 RAB8BQ92930 207 aa12.24□□□□□ -0.45
PLOD3-201ENST00000223127 MARVELD3Q96A59 401 aa12.24□□□□□ -0.45
PLOD3-201ENST00000223127 MSANTD3Q96H12 275 aa12.24□□□□□ -0.45
PLOD3-201ENST00000223127 DCLRE1CQ96SD1 692 aaKnown RBP12.24□□□□□ -0.45
PLOD3-201ENST00000223127 GLTPQ9NZD2 209 aa12.24□□□□□ -0.45
PLOD3-201ENST00000223127 CPNE7Q9UBL6 633 aa12.24□□□□□ -0.45
PLOD3-201ENST00000223127 DIMT1Q9UNQ2 313 aaKnown RBP12.24□□□□□ -0.45
PLOD3-201ENST00000223127 SF3B6Q9Y3B4 125 aaKnown RBP12.24□□□□□ -0.45
PLOD3-201ENST00000223127 FANCMQ8IYD8 2048 aa12.24□□□□□ -0.45
PLOD3-201ENST00000223127 SCN3AQ9NY46 2000 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms