RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 CXorf40BQ96DE9 158 aa14.11□□□□□ -0.15
EFNB1-201ENST00000204961 TAPBPLQ9BX59 468 aa14.11□□□□□ -0.15
EFNB1-201ENST00000204961 FN3KQ9H479 309 aa14.11□□□□□ -0.15
EFNB1-201ENST00000204961 ZNF346Q9UL40 294 aaKnown RBP14.11□□□□□ -0.15
EFNB1-201ENST00000204961 LSM2Q9Y333 95 aaKnown RBP14.11□□□□□ -0.15
EFNB1-201ENST00000204961 WDR45Q9Y484 360 aa14.11□□□□□ -0.15
EFNB1-201ENST00000204961 SIRT4Q9Y6E7 314 aaPredicted RBP14.11□□□□□ -0.15
EFNB1-201ENST00000204961 UNC13CQ8NB66 2214 aa14.11□□□□□ -0.15
EFNB1-201ENST00000204961 ALPK3Q96L96 1907 aa14.11□□□□□ -0.15
EFNB1-201ENST00000204961 C1QTNF3-AMACRE9PGA6 284 aa14.1□□□□□ -0.15
EFNB1-201ENST00000204961 PLA2G10O15496 165 aa14.1□□□□□ -0.15
EFNB1-201ENST00000204961 EEF1E1O43324 174 aaKnown RBP14.1□□□□□ -0.15
EFNB1-201ENST00000204961 LANCL1O43813 399 aa14.1□□□□□ -0.15
EFNB1-201ENST00000204961 PTHLHP12272 177 aa14.1□□□□□ -0.15
EFNB1-201ENST00000204961 MAPK9P45984 424 aa14.1□□□□□ -0.15
EFNB1-201ENST00000204961 MNX1P50219 401 aaPredicted RBP14.1□□□□□ -0.15
EFNB1-201ENST00000204961 PCBP4P57723 403 aaKnown RBP14.1□□□□□ -0.15
EFNB1-201ENST00000204961 NDUFAF6Q330K2 333 aa14.1□□□□□ -0.15
EFNB1-201ENST00000204961 LYPD4Q6UWN0 246 aa14.1□□□□□ -0.15
EFNB1-201ENST00000204961 SIRT6Q8N6T7 355 aa14.1□□□□□ -0.15
EFNB1-201ENST00000204961 OR7G2Q8NG99 324 aa14.1□□□□□ -0.15
EFNB1-201ENST00000204961 SLC35A4Q96G79 324 aa14.1□□□□□ -0.15
EFNB1-201ENST00000204961 SLC6A20Q9NP91 592 aa14.1□□□□□ -0.15
EFNB1-201ENST00000204961 TNFRSF10DQ9UBN6 386 aa14.1□□□□□ -0.15
EFNB1-201ENST00000204961 B4DXG7 233 aa14.1□□□□□ -0.15
EFNB1-201ENST00000204961 ICMTO60725 284 aa14.1□□□□□ -0.15
EFNB1-201ENST00000204961 CD3GP09693 182 aa14.1□□□□□ -0.15
EFNB1-201ENST00000204961 METRNLQ641Q3 311 aa14.1□□□□□ -0.15
EFNB1-201ENST00000204961 YAF2Q8IY57 180 aa14.1□□□□□ -0.15
EFNB1-201ENST00000204961 PIGXQ8TBF5 258 aa14.1□□□□□ -0.15
EFNB1-201ENST00000204961 SLC22A4Q9H015 551 aa14.1□□□□□ -0.15
EFNB1-201ENST00000204961 PPIL3Q9H2H8 161 aaKnown RBP14.1□□□□□ -0.15
EFNB1-201ENST00000204961 PRKAG2Q9UGJ0 569 aa14.1□□□□□ -0.15
EFNB1-201ENST00000204961 ENOPH1Q9UHY7 261 aa14.1□□□□□ -0.15
EFNB1-201ENST00000204961 SLC9A3R1O14745 358 aaPredicted RBP14.1□□□□□ -0.15
EFNB1-201ENST00000204961 TIMP1P01033 207 aa14.1□□□□□ -0.15
EFNB1-201ENST00000204961 CA3P07451 260 aa14.1□□□□□ -0.15
EFNB1-201ENST00000204961 ATP5A1P25705 553 aaKnown RBP14.1□□□□□ -0.15
EFNB1-201ENST00000204961 SLC1A3P43003 542 aa14.1□□□□□ -0.15
EFNB1-201ENST00000204961 KHKP50053 298 aa14.1□□□□□ -0.15
EFNB1-201ENST00000204961 C1orf61Q13536 156 aa14.1□□□□□ -0.15
EFNB1-201ENST00000204961 OR13C2Q8NGS9 318 aa14.1□□□□□ -0.15
EFNB1-201ENST00000204961 QRFPRQ96P65 431 aa14.1□□□□□ -0.15
EFNB1-201ENST00000204961 DPEP2Q9H4A9 486 aa14.1□□□□□ -0.15
EFNB1-201ENST00000204961 FGF22Q9HCT0 170 aa14.1□□□□□ -0.15
EFNB1-201ENST00000204961 MRPS2Q9Y399 296 aaKnown RBP14.1□□□□□ -0.15
EFNB1-201ENST00000204961 MAU2Q9Y6X3 613 aa14.1□□□□□ -0.15
EFNB1-201ENST00000204961 GTPBP1O00178 669 aaKnown RBP14.09□□□□□ -0.15
EFNB1-201ENST00000204961 GABRPO00591 440 aa14.09□□□□□ -0.15
EFNB1-201ENST00000204961 SMAD9O15198 467 aaKnown RBP14.09□□□□□ -0.15
EFNB1-201ENST00000204961 GDI1P31150 447 aa14.09□□□□□ -0.15
EFNB1-201ENST00000204961 DRD3P35462 400 aa14.09□□□□□ -0.15
EFNB1-201ENST00000204961 RHAGQ02094 409 aa14.09□□□□□ -0.15
EFNB1-201ENST00000204961 MAPK14Q16539 360 aa14.09□□□□□ -0.15
EFNB1-201ENST00000204961 PRR23CQ6ZRP0 262 aa14.09□□□□□ -0.15
EFNB1-201ENST00000204961 PRSS45Q7RTY3 260 aa14.09□□□□□ -0.15
EFNB1-201ENST00000204961 ZNF433Q8N7K0 673 aaPredicted RBP14.09□□□□□ -0.15
EFNB1-201ENST00000204961 SUN3Q8TAQ9 357 aa14.09□□□□□ -0.15
EFNB1-201ENST00000204961 SETD7Q8WTS6 366 aaKnown RBP14.09□□□□□ -0.15
EFNB1-201ENST00000204961 SLC25A46Q96AG3 418 aa14.09□□□□□ -0.15
EFNB1-201ENST00000204961 MS4A6EQ96DS6 147 aa14.09□□□□□ -0.15
EFNB1-201ENST00000204961 ORAI3Q9BRQ5 295 aa14.09□□□□□ -0.15
EFNB1-201ENST00000204961 NDUFB11Q9NX14 153 aa14.09□□□□□ -0.15
EFNB1-201ENST00000204961 KLHL28Q9NXS3 571 aa14.09□□□□□ -0.15
EFNB1-201ENST00000204961 MAPRE3Q9UPY8 281 aa14.09□□□□□ -0.15
EFNB1-201ENST00000204961 ALG5Q9Y673 324 aa14.09□□□□□ -0.15
EFNB1-201ENST00000204961 TEX46H3BTG2 121 aa14.09□□□□□ -0.15
EFNB1-201ENST00000204961 MAN2B1O00754 1011 aa14.09□□□□□ -0.15
EFNB1-201ENST00000204961 SCO1O75880 301 aa14.09□□□□□ -0.15
EFNB1-201ENST00000204961 UBXN7O94888 489 aa14.09□□□□□ -0.15
EFNB1-201ENST00000204961 ZIC2O95409 532 aaPredicted RBP14.09□□□□□ -0.15
EFNB1-201ENST00000204961 HOXB6P17509 224 aaKnown RBP14.09□□□□□ -0.15
EFNB1-201ENST00000204961 PYCR1P32322 319 aa14.09□□□□□ -0.15
EFNB1-201ENST00000204961 IFNA8P32881 189 aa14.09□□□□□ -0.15
EFNB1-201ENST00000204961 RAB28P51157 221 aa14.09□□□□□ -0.15
EFNB1-201ENST00000204961 GNG2P59768 71 aa14.09□□□□□ -0.15
EFNB1-201ENST00000204961 GPR50Q13585 617 aa14.09□□□□□ -0.15
EFNB1-201ENST00000204961 BTBD16Q32M84 506 aa14.09□□□□□ -0.15
EFNB1-201ENST00000204961 BCL2L15Q5TBC7 163 aa14.09□□□□□ -0.15
EFNB1-201ENST00000204961 SLC36A4Q6YBV0 504 aa14.09□□□□□ -0.15
EFNB1-201ENST00000204961 APOBEC4Q8WW27 367 aaKnown RBP14.09□□□□□ -0.15
EFNB1-201ENST00000204961 FOXN4Q96NZ1 517 aa14.09□□□□□ -0.15
EFNB1-201ENST00000204961 SLC38A1Q9H2H9 487 aa14.09□□□□□ -0.15
EFNB1-201ENST00000204961 A4GALTQ9NPC4 353 aa14.09□□□□□ -0.15
EFNB1-201ENST00000204961 CHST2Q9Y4C5 530 aa14.09□□□□□ -0.15
EFNB1-201ENST00000204961 STON1Q9Y6Q2 735 aa14.09□□□□□ -0.15
EFNB1-201ENST00000204961 MTCL1Q9Y4B5 1905 aaKnown RBP14.09□□□□□ -0.15
EFNB1-201ENST00000204961 A0A1B0GVT2 93 aa14.08□□□□□ -0.15
EFNB1-201ENST00000204961 DAPL1A0PJW8 107 aa14.08□□□□□ -0.15
EFNB1-201ENST00000204961 CRYZL1O95825 349 aa14.08□□□□□ -0.15
EFNB1-201ENST00000204961 MPIP34949 423 aa14.08□□□□□ -0.15
EFNB1-201ENST00000204961 PSMB10P40306 273 aa14.08□□□□□ -0.15
EFNB1-201ENST00000204961 CLDN12P56749 244 aa14.08□□□□□ -0.15
EFNB1-201ENST00000204961 E2F1Q01094 437 aa14.08□□□□□ -0.15
EFNB1-201ENST00000204961 MLLT11Q13015 90 aaPredicted RBP14.08□□□□□ -0.15
EFNB1-201ENST00000204961 CST6Q15828 149 aa14.08□□□□□ -0.15
EFNB1-201ENST00000204961 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.08□□□□□ -0.15
EFNB1-201ENST00000204961 LCN1P1Q5VSP4 162 aa14.08□□□□□ -0.15
EFNB1-201ENST00000204961 C12orf73Q69YU5 71 aa14.08□□□□□ -0.15
EFNB1-201ENST00000204961 SLC38A6Q8IZM9 456 aa14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms