RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 BTBD1Q9H0C5 482 aa13.11□□□□□ -0.31
USH1C-201ENST00000005226 ZBP1Q9H171 429 aa13.11□□□□□ -0.31
USH1C-201ENST00000005226 MED28Q9H204 178 aa13.11□□□□□ -0.31
USH1C-201ENST00000005226 WASH6PQ9NQA3 447 aa13.11□□□□□ -0.31
USH1C-201ENST00000005226 MGAT4AQ9UM21 535 aa13.11□□□□□ -0.31
USH1C-201ENST00000005226 SCN2AQ99250 2005 aa13.11□□□□□ -0.31
USH1C-201ENST00000005226 NUP210Q8TEM1 1887 aaPredicted RBP13.11□□□□□ -0.31
USH1C-201ENST00000005226 A0A0G2JPF8 293 aa13.11□□□□□ -0.31
USH1C-201ENST00000005226 CENPVL1A0A0U1RR11 272 aa13.11□□□□□ -0.31
USH1C-201ENST00000005226 IRGMA1A4Y4 181 aa13.11□□□□□ -0.31
USH1C-201ENST00000005226 HNRNPCL2B2RXH8 293 aa13.11□□□□□ -0.31
USH1C-201ENST00000005226 HNRNPCL3B7ZW38 293 aa13.11□□□□□ -0.31
USH1C-201ENST00000005226 RHOP08100 348 aa13.11□□□□□ -0.31
USH1C-201ENST00000005226 CISD3P0C7P0 127 aa13.11□□□□□ -0.31
USH1C-201ENST00000005226 HNRNPCL4P0DMR1 293 aa13.11□□□□□ -0.31
USH1C-201ENST00000005226 ENPP1P22413 925 aa13.11□□□□□ -0.31
USH1C-201ENST00000005226 CERS1P27544 350 aa13.11□□□□□ -0.31
USH1C-201ENST00000005226 SLC6A1P30531 599 aa13.11□□□□□ -0.31
USH1C-201ENST00000005226 BCL6P41182 706 aa13.11□□□□□ -0.31
USH1C-201ENST00000005226 RGS8P57771 180 aaPredicted RBP13.11□□□□□ -0.31
USH1C-201ENST00000005226 SLC25A35Q3KQZ1 300 aa13.11□□□□□ -0.31
USH1C-201ENST00000005226 ESPNLQ6ZVH7 1005 aa13.11□□□□□ -0.31
USH1C-201ENST00000005226 CREB3L2Q70SY1 520 aa13.11□□□□□ -0.31
USH1C-201ENST00000005226 LINC00471Q8N535 108 aa13.11□□□□□ -0.31
USH1C-201ENST00000005226 OR13C5Q8NGS8 318 aa13.11□□□□□ -0.31
USH1C-201ENST00000005226 RFKQ969G6 155 aa13.11□□□□□ -0.31
USH1C-201ENST00000005226 COL26A1Q96A83 441 aa13.11□□□□□ -0.31
USH1C-201ENST00000005226 MED30Q96HR3 178 aa13.11□□□□□ -0.31
USH1C-201ENST00000005226 DEFB118Q96PH6 123 aa13.11□□□□□ -0.31
USH1C-201ENST00000005226 STMN3Q9NZ72 180 aa13.11□□□□□ -0.31
USH1C-201ENST00000005226 PLEKHM1Q9Y4G2 1056 aa13.11□□□□□ -0.31
USH1C-201ENST00000005226 KIAA1549LQ6ZVL6 1849 aa13.1□□□□□ -0.31
USH1C-201ENST00000005226 CACNB4O00305 520 aaPredicted RBP13.1□□□□□ -0.31
USH1C-201ENST00000005226 MAGEB4O15481 346 aaPredicted RBP13.1□□□□□ -0.31
USH1C-201ENST00000005226 NARSO43776 548 aaKnown RBP13.1□□□□□ -0.31
USH1C-201ENST00000005226 CD3GP09693 182 aa13.1□□□□□ -0.31
USH1C-201ENST00000005226 HOXD10P28358 340 aa13.1□□□□□ -0.31
USH1C-201ENST00000005226 ACVR1BP36896 505 aa13.1□□□□□ -0.31
USH1C-201ENST00000005226 ERVFC1P60507 584 aa13.1□□□□□ -0.31
USH1C-201ENST00000005226 ST3GAL3Q11203 375 aa13.1□□□□□ -0.31
USH1C-201ENST00000005226 CAMK1Q14012 370 aa13.1□□□□□ -0.31
USH1C-201ENST00000005226 ZNF77Q15935 545 aa13.1□□□□□ -0.31
USH1C-201ENST00000005226 PLA1AQ53H76 456 aa13.1□□□□□ -0.31
USH1C-201ENST00000005226 NATD1Q8N6N6 113 aa13.1□□□□□ -0.31
USH1C-201ENST00000005226 NUP43Q8NFH3 380 aa13.1□□□□□ -0.31
USH1C-201ENST00000005226 OR10H4Q8NGA5 316 aa13.1□□□□□ -0.31
USH1C-201ENST00000005226 RFT1Q96AA3 541 aa13.1□□□□□ -0.31
USH1C-201ENST00000005226 GPR34Q9UPC5 381 aa13.1□□□□□ -0.31
USH1C-201ENST00000005226 OR1A2Q9Y585 309 aa13.1□□□□□ -0.31
USH1C-201ENST00000005226 AIFM1O95831 613 aa13.1□□□□□ -0.31
USH1C-201ENST00000005226 ZGLP1P0C6A0 271 aa13.1□□□□□ -0.31
USH1C-201ENST00000005226 ACRP10323 421 aa13.1□□□□□ -0.31
USH1C-201ENST00000005226 SSTR2P30874 369 aa13.1□□□□□ -0.31
USH1C-201ENST00000005226 HTR1FP30939 366 aa13.1□□□□□ -0.31
USH1C-201ENST00000005226 BTCP35070 178 aa13.1□□□□□ -0.31
USH1C-201ENST00000005226 IFNGR2P38484 337 aa13.1□□□□□ -0.31
USH1C-201ENST00000005226 GCGRP47871 477 aa13.1□□□□□ -0.31
USH1C-201ENST00000005226 SRP54P61011 504 aaKnown RBP13.1□□□□□ -0.31
USH1C-201ENST00000005226 SLC9A5Q14940 896 aa13.1□□□□□ -0.31
USH1C-201ENST00000005226 NTRK2Q16620 822 aa13.1□□□□□ -0.31
USH1C-201ENST00000005226 CCNJQ5T5M9 372 aa13.1□□□□□ -0.31
USH1C-201ENST00000005226 CXXC5Q7LFL8 322 aaKnown RBP13.1□□□□□ -0.31
USH1C-201ENST00000005226 SHISA5Q8N114 240 aa13.1□□□□□ -0.31
USH1C-201ENST00000005226 OR8H3Q8N146 312 aa13.1□□□□□ -0.31
USH1C-201ENST00000005226 ACOT4Q8N9L9 421 aa13.1□□□□□ -0.31
USH1C-201ENST00000005226 PXYLP1Q8TE99 480 aa13.1□□□□□ -0.31
USH1C-201ENST00000005226 ZNF431Q8TF32 576 aaPredicted RBP13.1□□□□□ -0.31
USH1C-201ENST00000005226 ZNF514Q96K75 400 aaPredicted RBP13.1□□□□□ -0.31
USH1C-201ENST00000005226 ALG8Q9BVK2 526 aa13.1□□□□□ -0.31
USH1C-201ENST00000005226 DPH1Q9BZG8 443 aa13.1□□□□□ -0.31
USH1C-201ENST00000005226 PAK6Q9NQU5 681 aaPredicted RBP13.1□□□□□ -0.31
USH1C-201ENST00000005226 KLHL1Q9NR64 748 aa13.1□□□□□ -0.31
USH1C-201ENST00000005226 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.1□□□□□ -0.31
USH1C-201ENST00000005226 SLC7A7Q9UM01 511 aa13.1□□□□□ -0.31
USH1C-201ENST00000005226 EXOGQ9Y2C4 368 aaKnown RBP13.1□□□□□ -0.31
USH1C-201ENST00000005226 EFCAB14O75071 495 aa13.09□□□□□ -0.31
USH1C-201ENST00000005226 RGS9O75916 674 aaPredicted RBP13.09□□□□□ -0.31
USH1C-201ENST00000005226 IGHA1P01876 353 aa13.09□□□□□ -0.31
USH1C-201ENST00000005226 CLUP10909 449 aa13.09□□□□□ -0.31
USH1C-201ENST00000005226 CCR6P51684 374 aa13.09□□□□□ -0.31
USH1C-201ENST00000005226 ZNF620Q6ZNG0 422 aa13.09□□□□□ -0.31
USH1C-201ENST00000005226 C16orf62Q7Z3J2 963 aa13.09□□□□□ -0.31
USH1C-201ENST00000005226 ZNF655Q8N720 491 aaPredicted RBP13.09□□□□□ -0.31
USH1C-201ENST00000005226 SLC16A11Q8NCK7 471 aa13.09□□□□□ -0.31
USH1C-201ENST00000005226 OSTF1Q92882 214 aa13.09□□□□□ -0.31
USH1C-201ENST00000005226 DACT3Q96B18 629 aaPredicted RBP13.09□□□□□ -0.31
USH1C-201ENST00000005226 CREB3L1Q96BA8 519 aa13.09□□□□□ -0.31
USH1C-201ENST00000005226 SLC35A4Q96G79 324 aa13.09□□□□□ -0.31
USH1C-201ENST00000005226 SLC41A3Q96GZ6 507 aa13.09□□□□□ -0.31
USH1C-201ENST00000005226 ZFP3Q96NJ6 502 aa13.09□□□□□ -0.31
USH1C-201ENST00000005226 COQ7Q99807 217 aa13.09□□□□□ -0.31
USH1C-201ENST00000005226 ARHGDIGQ99819 225 aa13.09□□□□□ -0.31
USH1C-201ENST00000005226 OR51V1Q9H2C8 321 aa13.09□□□□□ -0.31
USH1C-201ENST00000005226 UBQLN3Q9H347 655 aa13.09□□□□□ -0.31
USH1C-201ENST00000005226 NARFLQ9H6Q4 476 aa13.09□□□□□ -0.31
USH1C-201ENST00000005226 ATP13A2Q9NQ11 1180 aa13.09□□□□□ -0.31
USH1C-201ENST00000005226 CYSLTR2Q9NS75 346 aa13.09□□□□□ -0.31
USH1C-201ENST00000005226 BABAM2Q9NXR7 383 aa13.09□□□□□ -0.31
USH1C-201ENST00000005226 SLCO1C1Q9NYB5 712 aa13.09□□□□□ -0.31
USH1C-201ENST00000005226 IL20Q9NYY1 176 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms