RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 ZNF223Q9UK11 482 aaPredicted RBP8.68□□□□□ -1.02
PHGDH-228ENST00000641847 PPIEQ9UNP9 301 aaKnown RBP8.68□□□□□ -1.02
PHGDH-228ENST00000641847 USP22Q9UPT9 525 aa8.68□□□□□ -1.02
PHGDH-228ENST00000641847 CFL2Q9Y281 166 aa8.68□□□□□ -1.02
PHGDH-228ENST00000641847 NUP214P35658 2090 aaPredicted RBP8.68□□□□□ -1.02
PHGDH-228ENST00000641847 ANKRD65E5RJM6 399 aa8.67□□□□□ -1.02
PHGDH-228ENST00000641847 HMGN4O00479 90 aa8.67□□□□□ -1.02
PHGDH-228ENST00000641847 ASNA1O43681 348 aa8.67□□□□□ -1.02
PHGDH-228ENST00000641847 TNFRSF21O75509 655 aa8.67□□□□□ -1.02
PHGDH-228ENST00000641847 HPP00738 406 aa8.67□□□□□ -1.02
PHGDH-228ENST00000641847 ALOX5P09917 674 aa8.67□□□□□ -1.02
PHGDH-228ENST00000641847 OR12D1P0DN82 309 aa8.67□□□□□ -1.02
PHGDH-228ENST00000641847 BMP2P12643 396 aa8.67□□□□□ -1.02
PHGDH-228ENST00000641847 HSD17B1P14061 328 aa8.67□□□□□ -1.02
PHGDH-228ENST00000641847 TCN1P20061 433 aaPredicted RBP8.67□□□□□ -1.02
PHGDH-228ENST00000641847 SOX11P35716 441 aa8.67□□□□□ -1.02
PHGDH-228ENST00000641847 MAN2A2P49641 1150 aa8.67□□□□□ -1.02
PHGDH-228ENST00000641847 GZMMP51124 257 aa8.67□□□□□ -1.02
PHGDH-228ENST00000641847 CLCN2P51788 898 aa8.67□□□□□ -1.02
PHGDH-228ENST00000641847 GPR143P51810 404 aa8.67□□□□□ -1.02
PHGDH-228ENST00000641847 CORO7P57737 925 aa8.67□□□□□ -1.02
PHGDH-228ENST00000641847 EXT1Q16394 746 aa8.67□□□□□ -1.02
PHGDH-228ENST00000641847 NNATQ16517 81 aa8.67□□□□□ -1.02
PHGDH-228ENST00000641847 BTBD16Q32M84 506 aa8.67□□□□□ -1.02
PHGDH-228ENST00000641847 SPATS1Q496A3 300 aa8.67□□□□□ -1.02
PHGDH-228ENST00000641847 EXOSC6Q5RKV6 272 aaKnown RBP8.67□□□□□ -1.02
PHGDH-228ENST00000641847 IRAK1BP1Q5VVH5 260 aa8.67□□□□□ -1.02
PHGDH-228ENST00000641847 HLA-DQA1Q5Y7H0 255 aa8.67□□□□□ -1.02
PHGDH-228ENST00000641847 PLAG1Q6DJT9 500 aa8.67□□□□□ -1.02
PHGDH-228ENST00000641847 ERICH5Q6P6B1 374 aa8.67□□□□□ -1.02
PHGDH-228ENST00000641847 FAM180AQ6UWF9 173 aa8.67□□□□□ -1.02
PHGDH-228ENST00000641847 NPSR1Q6W5P4 371 aa8.67□□□□□ -1.02
PHGDH-228ENST00000641847 HSDL2Q6YN16 418 aa8.67□□□□□ -1.02
PHGDH-228ENST00000641847 MRGPRGQ86SM5 289 aa8.67□□□□□ -1.02
PHGDH-228ENST00000641847 FBXW8Q8N3Y1 598 aa8.67□□□□□ -1.02
PHGDH-228ENST00000641847 APCDD1LQ8NCL9 501 aa8.67□□□□□ -1.02
PHGDH-228ENST00000641847 GRHL3Q8TE85 626 aa8.67□□□□□ -1.02
PHGDH-228ENST00000641847 FAR1Q8WVX9 515 aa8.67□□□□□ -1.02
PHGDH-228ENST00000641847 PIK3R3Q92569 461 aa8.67□□□□□ -1.02
PHGDH-228ENST00000641847 HOXB13Q92826 284 aaPredicted RBP8.67□□□□□ -1.02
PHGDH-228ENST00000641847 CDS1Q92903 461 aa8.67□□□□□ -1.02
PHGDH-228ENST00000641847 MAL2Q969L2 176 aa8.67□□□□□ -1.02
PHGDH-228ENST00000641847 RELTQ969Z4 430 aa8.67□□□□□ -1.02
PHGDH-228ENST00000641847 IMMP1LQ96LU5 166 aa8.67□□□□□ -1.02
PHGDH-228ENST00000641847 ZNF583Q96ND8 569 aa8.67□□□□□ -1.02
PHGDH-228ENST00000641847 RAB3IPQ96QF0 476 aaPredicted RBP8.67□□□□□ -1.02
PHGDH-228ENST00000641847 STACQ99469 402 aa8.67□□□□□ -1.02
PHGDH-228ENST00000641847 LMF2Q9BU23 707 aaKnown RBP8.67□□□□□ -1.02
PHGDH-228ENST00000641847 WWTR1Q9GZV5 400 aa8.67□□□□□ -1.02
PHGDH-228ENST00000641847 MMADHCQ9H3L0 296 aaPredicted RBP8.67□□□□□ -1.02
PHGDH-228ENST00000641847 PIGUQ9H490 435 aa8.67□□□□□ -1.02
PHGDH-228ENST00000641847 MMP25Q9NPA2 562 aa8.67□□□□□ -1.02
PHGDH-228ENST00000641847 A4GALTQ9NPC4 353 aa8.67□□□□□ -1.02
PHGDH-228ENST00000641847 THUMPD1Q9NXG2 353 aaKnown RBP8.67□□□□□ -1.02
PHGDH-228ENST00000641847 P4HTMQ9NXG6 502 aa8.67□□□□□ -1.02
PHGDH-228ENST00000641847 P2RX2Q9UBL9 471 aa8.67□□□□□ -1.02
PHGDH-228ENST00000641847 CD300AQ9UGN4 299 aa8.67□□□□□ -1.02
PHGDH-228ENST00000641847 NTNG1Q9Y2I2 539 aa8.67□□□□□ -1.02
PHGDH-228ENST00000641847 ELOVL7A1L3X0 281 aa8.66□□□□□ -1.02
PHGDH-228ENST00000641847 CFAP73A6NFT4 308 aa8.66□□□□□ -1.02
PHGDH-228ENST00000641847 DUXAA6NLW8 204 aa8.66□□□□□ -1.02
PHGDH-228ENST00000641847 MASP2O00187 686 aa8.66□□□□□ -1.02
PHGDH-228ENST00000641847 GSTA4O15217 222 aa8.66□□□□□ -1.02
PHGDH-228ENST00000641847 PRKNO60260 465 aaPredicted RBP8.66□□□□□ -1.02
PHGDH-228ENST00000641847 NKX2-2O95096 273 aa8.66□□□□□ -1.02
PHGDH-228ENST00000641847 AGR2O95994 175 aa8.66□□□□□ -1.02
PHGDH-228ENST00000641847 BCHEP06276 602 aa8.66□□□□□ -1.02
PHGDH-228ENST00000641847 CELA2AP08217 269 aa8.66□□□□□ -1.02
PHGDH-228ENST00000641847 ARAFP10398 606 aa8.66□□□□□ -1.02
PHGDH-228ENST00000641847 CD99P14209 185 aa8.66□□□□□ -1.02
PHGDH-228ENST00000641847 NQO1P15559 274 aaKnown RBP8.66□□□□□ -1.02
PHGDH-228ENST00000641847 ME2P23368 584 aa8.66□□□□□ -1.02
PHGDH-228ENST00000641847 GABRA3P34903 492 aa8.66□□□□□ -1.02
PHGDH-228ENST00000641847 MSX2P35548 267 aaPredicted RBP8.66□□□□□ -1.02
PHGDH-228ENST00000641847 MAP3K8P41279 467 aa8.66□□□□□ -1.02
PHGDH-228ENST00000641847 RNF4P78317 190 aa8.66□□□□□ -1.02
PHGDH-228ENST00000641847 CDK6Q00534 326 aa8.66□□□□□ -1.02
PHGDH-228ENST00000641847 FUT5Q11128 374 aa8.66□□□□□ -1.02
PHGDH-228ENST00000641847 ADRM1Q16186 407 aa8.66□□□□□ -1.02
PHGDH-228ENST00000641847 VMACQ2NL98 169 aa8.66□□□□□ -1.02
PHGDH-228ENST00000641847 DCAF10Q5QP82 559 aa8.66□□□□□ -1.02
PHGDH-228ENST00000641847 ATAD3BQ5T9A4 648 aa8.66□□□□□ -1.02
PHGDH-228ENST00000641847 B3GNTL1Q67FW5 361 aaPredicted RBP8.66□□□□□ -1.02
PHGDH-228ENST00000641847 PGM2L1Q6PCE3 622 aa8.66□□□□□ -1.02
PHGDH-228ENST00000641847 C16orf62Q7Z3J2 963 aa8.66□□□□□ -1.02
PHGDH-228ENST00000641847 PTOV1Q86YD1 416 aa8.66□□□□□ -1.02
PHGDH-228ENST00000641847 SLC44A2Q8IWA5 706 aaPredicted RBP8.66□□□□□ -1.02
PHGDH-228ENST00000641847 MICU2Q8IYU8 434 aa8.66□□□□□ -1.02
PHGDH-228ENST00000641847 BCORP1Q8N888 145 aa8.66□□□□□ -1.02
PHGDH-228ENST00000641847 COX18Q8N8Q8 333 aa8.66□□□□□ -1.02
PHGDH-228ENST00000641847 SLC16A11Q8NCK7 471 aa8.66□□□□□ -1.02
PHGDH-228ENST00000641847 C11orf65Q8NCR3 313 aa8.66□□□□□ -1.02
PHGDH-228ENST00000641847 TNIP2Q8NFZ5 429 aa8.66□□□□□ -1.02
PHGDH-228ENST00000641847 NFKBIDQ8NI38 313 aa8.66□□□□□ -1.02
PHGDH-228ENST00000641847 NUBPLQ8TB37 319 aa8.66□□□□□ -1.02
PHGDH-228ENST00000641847 M1APQ8TC57 530 aa8.66□□□□□ -1.02
PHGDH-228ENST00000641847 ELP5Q8TE02 316 aa8.66□□□□□ -1.02
PHGDH-228ENST00000641847 XAGE5Q8WWM1 108 aa8.66□□□□□ -1.02
PHGDH-228ENST00000641847 ITLN2Q8WWU7 325 aaPredicted RBP8.66□□□□□ -1.02
PHGDH-228ENST00000641847 UTP4Q969X6 686 aaKnown RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms