RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 SEC14L3Q9UDX4 400 aa11.96□□□□□ -0.49
PHGDH-218ENST00000641491 ZNF223Q9UK11 482 aaPredicted RBP11.96□□□□□ -0.49
PHGDH-218ENST00000641491 GMEB1Q9Y692 573 aa11.96□□□□□ -0.49
PHGDH-218ENST00000641491 OR6C70A6NIJ9 312 aa11.95□□□□□ -0.5
PHGDH-218ENST00000641491 FAM47E-STBD1D6RA91 191 aa11.95□□□□□ -0.5
PHGDH-218ENST00000641491 MASP2O00187 686 aa11.95□□□□□ -0.5
PHGDH-218ENST00000641491 NME4O00746 187 aa11.95□□□□□ -0.5
PHGDH-218ENST00000641491 ATXN7O15265 892 aaPredicted RBP11.95□□□□□ -0.5
PHGDH-218ENST00000641491 PRKNO60260 465 aaPredicted RBP11.95□□□□□ -0.5
PHGDH-218ENST00000641491 NME6O75414 186 aaPredicted RBP11.95□□□□□ -0.5
PHGDH-218ENST00000641491 PDE5AO76074 875 aa11.95□□□□□ -0.5
PHGDH-218ENST00000641491 IL33O95760 270 aa11.95□□□□□ -0.5
PHGDH-218ENST00000641491 CT45A8P0DMV1 189 aa11.95□□□□□ -0.5
PHGDH-218ENST00000641491 CT45A9P0DMV2 189 aa11.95□□□□□ -0.5
PHGDH-218ENST00000641491 CD46P15529 392 aa11.95□□□□□ -0.5
PHGDH-218ENST00000641491 IL7RP16871 459 aa11.95□□□□□ -0.5
PHGDH-218ENST00000641491 HOXB9P17482 250 aaPredicted RBP11.95□□□□□ -0.5
PHGDH-218ENST00000641491 AQP1P29972 269 aa11.95□□□□□ -0.5
PHGDH-218ENST00000641491 SOX3P41225 446 aa11.95□□□□□ -0.5
PHGDH-218ENST00000641491 PNLIPRP2P54317 469 aa11.95□□□□□ -0.5
PHGDH-218ENST00000641491 NCALDP61601 193 aa11.95□□□□□ -0.5
PHGDH-218ENST00000641491 Q0VFX4 171 aa11.95□□□□□ -0.5
PHGDH-218ENST00000641491 MFAP5Q13361 173 aa11.95□□□□□ -0.5
PHGDH-218ENST00000641491 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.95□□□□□ -0.5
PHGDH-218ENST00000641491 LIN52Q52LA3 116 aa11.95□□□□□ -0.5
PHGDH-218ENST00000641491 LACTB2Q53H82 288 aaPredicted RBP11.95□□□□□ -0.5
PHGDH-218ENST00000641491 EIPR1Q53HC9 387 aa11.95□□□□□ -0.5
PHGDH-218ENST00000641491 CT45A2Q5DJT8 189 aa11.95□□□□□ -0.5
PHGDH-218ENST00000641491 CCNJQ5T5M9 372 aa11.95□□□□□ -0.5
PHGDH-218ENST00000641491 B3GNTL1Q67FW5 361 aaPredicted RBP11.95□□□□□ -0.5
PHGDH-218ENST00000641491 RTL4Q6ZR62 310 aa11.95□□□□□ -0.5
PHGDH-218ENST00000641491 NUP54Q7Z3B4 507 aa11.95□□□□□ -0.5
PHGDH-218ENST00000641491 GPR155Q7Z3F1 870 aa11.95□□□□□ -0.5
PHGDH-218ENST00000641491 GALNT10Q86SR1 603 aa11.95□□□□□ -0.5
PHGDH-218ENST00000641491 ZNF605Q86T29 641 aa11.95□□□□□ -0.5
PHGDH-218ENST00000641491 ZNF619Q8N2I2 560 aa11.95□□□□□ -0.5
PHGDH-218ENST00000641491 FBXW8Q8N3Y1 598 aa11.95□□□□□ -0.5
PHGDH-218ENST00000641491 FAM98AQ8NCA5 519 aaKnown RBP11.95□□□□□ -0.5
PHGDH-218ENST00000641491 CHDHQ8NE62 594 aaPredicted RBP11.95□□□□□ -0.5
PHGDH-218ENST00000641491 PMM1Q92871 262 aa11.95□□□□□ -0.5
PHGDH-218ENST00000641491 POP5Q969H6 163 aaKnown RBP11.95□□□□□ -0.5
PHGDH-218ENST00000641491 CRELD1Q96HD1 420 aa11.95□□□□□ -0.5
PHGDH-218ENST00000641491 SGCZQ96LD1 299 aa11.95□□□□□ -0.5
PHGDH-218ENST00000641491 RNF145Q96MT1 663 aa11.95□□□□□ -0.5
PHGDH-218ENST00000641491 TRIM4Q9C037 500 aa11.95□□□□□ -0.5
PHGDH-218ENST00000641491 IKZF5Q9H5V7 419 aa11.95□□□□□ -0.5
PHGDH-218ENST00000641491 SDHAF3Q9NRP4 125 aa11.95□□□□□ -0.5
PHGDH-218ENST00000641491 UBQLN4Q9NRR5 601 aa11.95□□□□□ -0.5
PHGDH-218ENST00000641491 LRFN1Q9P244 771 aa11.95□□□□□ -0.5
PHGDH-218ENST00000641491 SUCOQ9UBS9 1254 aaKnown RBP11.95□□□□□ -0.5
PHGDH-218ENST00000641491 RPS6KA6Q9UK32 745 aa11.95□□□□□ -0.5
PHGDH-218ENST00000641491 IFT52Q9Y366 437 aa11.95□□□□□ -0.5
PHGDH-218ENST00000641491 SNX13Q9Y5W8 968 aa11.95□□□□□ -0.5
PHGDH-218ENST00000641491 ZNF462Q96JM2 2506 aa11.94□□□□□ -0.5
PHGDH-218ENST00000641491 CFAP73A6NFT4 308 aa11.94□□□□□ -0.5
PHGDH-218ENST00000641491 GTPBP1O00178 669 aaKnown RBP11.94□□□□□ -0.5
PHGDH-218ENST00000641491 CXCR6O00574 342 aa11.94□□□□□ -0.5
PHGDH-218ENST00000641491 TNFRSF21O75509 655 aa11.94□□□□□ -0.5
PHGDH-218ENST00000641491 DNAJB5O75953 348 aa11.94□□□□□ -0.5
PHGDH-218ENST00000641491 UTS2O95399 124 aa11.94□□□□□ -0.5
PHGDH-218ENST00000641491 DBIP07108 87 aaKnown RBP11.94□□□□□ -0.5
PHGDH-218ENST00000641491 FBXO45P0C2W1 286 aa11.94□□□□□ -0.5
PHGDH-218ENST00000641491 HSD17B1P14061 328 aa11.94□□□□□ -0.5
PHGDH-218ENST00000641491 UQCRBP14927 111 aa11.94□□□□□ -0.5
PHGDH-218ENST00000641491 HTR1EP28566 365 aa11.94□□□□□ -0.5
PHGDH-218ENST00000641491 CPOXP36551 454 aa11.94□□□□□ -0.5
PHGDH-218ENST00000641491 DCTP40126 519 aa11.94□□□□□ -0.5
PHGDH-218ENST00000641491 MASP1P48740 699 aa11.94□□□□□ -0.5
PHGDH-218ENST00000641491 HLCSP50747 726 aa11.94□□□□□ -0.5
PHGDH-218ENST00000641491 POLE2P56282 527 aa11.94□□□□□ -0.5
PHGDH-218ENST00000641491 SOX8P57073 446 aa11.94□□□□□ -0.5
PHGDH-218ENST00000641491 VEZF1Q14119 521 aa11.94□□□□□ -0.5
PHGDH-218ENST00000641491 SYPL1Q16563 259 aa11.94□□□□□ -0.5
PHGDH-218ENST00000641491 ZSWIM7Q19AV6 140 aa11.94□□□□□ -0.5
PHGDH-218ENST00000641491 TBCELQ5QJ74 424 aa11.94□□□□□ -0.5
PHGDH-218ENST00000641491 C1orf146Q5VVC0 180 aa11.94□□□□□ -0.5
PHGDH-218ENST00000641491 NET1Q7Z628 596 aaPredicted RBP11.94□□□□□ -0.5
PHGDH-218ENST00000641491 DHFR2Q86XF0 187 aa11.94□□□□□ -0.5
PHGDH-218ENST00000641491 HPS6Q86YV9 775 aa11.94□□□□□ -0.5
PHGDH-218ENST00000641491 ARMC8Q8IUR7 673 aa11.94□□□□□ -0.5
PHGDH-218ENST00000641491 ZZZ3Q8IYH5 903 aa11.94□□□□□ -0.5
PHGDH-218ENST00000641491 C10orf67Q8IYJ2 551 aa11.94□□□□□ -0.5
PHGDH-218ENST00000641491 ULK2Q8IYT8 1036 aa11.94□□□□□ -0.5
PHGDH-218ENST00000641491 TMCO5AQ8N6Q1 288 aa11.94□□□□□ -0.5
PHGDH-218ENST00000641491 ZNF441Q8N8Z8 693 aa11.94□□□□□ -0.5
PHGDH-218ENST00000641491 ANKFN1Q8N957 763 aa11.94□□□□□ -0.5
PHGDH-218ENST00000641491 FDCSPQ8NFU4 85 aa11.94□□□□□ -0.5
PHGDH-218ENST00000641491 OR4N2Q8NGD1 307 aa11.94□□□□□ -0.5
PHGDH-218ENST00000641491 FBXO27Q8NI29 283 aa11.94□□□□□ -0.5
PHGDH-218ENST00000641491 SLC38A5Q8WUX1 472 aa11.94□□□□□ -0.5
PHGDH-218ENST00000641491 WDR60Q8WVS4 1066 aa11.94□□□□□ -0.5
PHGDH-218ENST00000641491 OIT3Q8WWZ8 545 aa11.94□□□□□ -0.5
PHGDH-218ENST00000641491 TTC9Q92623 222 aa11.94□□□□□ -0.5
PHGDH-218ENST00000641491 NSMCE2Q96MF7 247 aa11.94□□□□□ -0.5
PHGDH-218ENST00000641491 LMF1Q96S06 567 aa11.94□□□□□ -0.5
PHGDH-218ENST00000641491 SDF2Q99470 211 aa11.94□□□□□ -0.5
PHGDH-218ENST00000641491 SERHL2Q9H4I8 314 aa11.94□□□□□ -0.5
PHGDH-218ENST00000641491 MTHFD2LQ9H903 347 aaPredicted RBP11.94□□□□□ -0.5
PHGDH-218ENST00000641491 SACM1LQ9NTJ5 587 aa11.94□□□□□ -0.5
PHGDH-218ENST00000641491 ANKRD10Q9NXR5 420 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms