RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 CDKL4Q5MAI5 379 aa12.91□□□□□ -0.34
SCARB2-227ENST00000640957 PIP5KL1Q5T9C9 394 aa12.91□□□□□ -0.34
SCARB2-227ENST00000640957 ELP2Q6IA86 826 aa12.91□□□□□ -0.34
SCARB2-227ENST00000640957 PLBD1Q6P4A8 553 aa12.91□□□□□ -0.34
SCARB2-227ENST00000640957 ADGRG3Q86Y34 549 aa12.91□□□□□ -0.34
SCARB2-227ENST00000640957 GPALPP1Q8IXQ4 340 aa12.91□□□□□ -0.34
SCARB2-227ENST00000640957 OXR1Q8N573 874 aa12.91□□□□□ -0.34
SCARB2-227ENST00000640957 C2CD4CQ8TF44 421 aa12.91□□□□□ -0.34
SCARB2-227ENST00000640957 HMX1Q9NP08 348 aaPredicted RBP12.91□□□□□ -0.34
SCARB2-227ENST00000640957 CUEDC1Q9NWM3 386 aaPredicted RBP12.91□□□□□ -0.34
SCARB2-227ENST00000640957 NFKBIL1Q9UBC1 381 aaPredicted RBP12.91□□□□□ -0.34
SCARB2-227ENST00000640957 GULP1Q9UBP9 304 aa12.91□□□□□ -0.34
SCARB2-227ENST00000640957 ARPC1BO15143 372 aaKnown RBP12.91□□□□□ -0.34
SCARB2-227ENST00000640957 HOXC8P31273 242 aa12.91□□□□□ -0.34
SCARB2-227ENST00000640957 RAD52P43351 418 aa12.91□□□□□ -0.34
SCARB2-227ENST00000640957 EEF1A2Q05639 463 aaKnown RBP12.91□□□□□ -0.34
SCARB2-227ENST00000640957 ZNF33BQ06732 778 aa12.91□□□□□ -0.34
SCARB2-227ENST00000640957 TPBGQ13641 420 aa12.91□□□□□ -0.34
SCARB2-227ENST00000640957 GSG1Q2KHT4 349 aa12.91□□□□□ -0.34
SCARB2-227ENST00000640957 SYTL3Q4VX76 610 aa12.91□□□□□ -0.34
SCARB2-227ENST00000640957 ZNF697Q5TEC3 545 aa12.91□□□□□ -0.34
SCARB2-227ENST00000640957 RRM2BQ7LG56 351 aa12.91□□□□□ -0.34
SCARB2-227ENST00000640957 CEACAM19Q7Z692 300 aa12.91□□□□□ -0.34
SCARB2-227ENST00000640957 ZFP82Q8N141 532 aa12.91□□□□□ -0.34
SCARB2-227ENST00000640957 ERMAPQ96PL5 475 aaPredicted RBP12.91□□□□□ -0.34
SCARB2-227ENST00000640957 MNTQ99583 582 aa12.91□□□□□ -0.34
SCARB2-227ENST00000640957 FUZQ9BT04 418 aa12.91□□□□□ -0.34
SCARB2-227ENST00000640957 MTG2Q9H4K7 406 aa12.91□□□□□ -0.34
SCARB2-227ENST00000640957 DSPPQ9NZW4 1301 aa12.91□□□□□ -0.34
SCARB2-227ENST00000640957 CORO2BQ9UQ03 480 aa12.91□□□□□ -0.34
SCARB2-227ENST00000640957 TSPAN6O43657 245 aa12.9□□□□□ -0.34
SCARB2-227ENST00000640957 B4GALT2O60909 372 aa12.9□□□□□ -0.34
SCARB2-227ENST00000640957 FURINP09958 794 aa12.9□□□□□ -0.34
SCARB2-227ENST00000640957 ARAFP10398 606 aa12.9□□□□□ -0.34
SCARB2-227ENST00000640957 PPIBP23284 216 aaKnown RBP12.9□□□□□ -0.34
SCARB2-227ENST00000640957 PCDH1Q08174 1060 aa12.9□□□□□ -0.34
SCARB2-227ENST00000640957 MRPL58Q14197 206 aaKnown RBP12.9□□□□□ -0.34
SCARB2-227ENST00000640957 TCEA2Q15560 299 aa12.9□□□□□ -0.34
SCARB2-227ENST00000640957 SLC36A2Q495M3 483 aa12.9□□□□□ -0.34
SCARB2-227ENST00000640957 C3orf38Q5JPI3 329 aa12.9□□□□□ -0.34
SCARB2-227ENST00000640957 Q6ZVL8 140 aa12.9□□□□□ -0.34
SCARB2-227ENST00000640957 SIRT6Q8N6T7 355 aa12.9□□□□□ -0.34
SCARB2-227ENST00000640957 TEX47Q8TBZ9 253 aa12.9□□□□□ -0.34
SCARB2-227ENST00000640957 HERVK_113Q902F9 699 aa12.9□□□□□ -0.34
SCARB2-227ENST00000640957 ARL6Q9H0F7 186 aa12.9□□□□□ -0.34
SCARB2-227ENST00000640957 OR51I1Q9H343 314 aa12.9□□□□□ -0.34
SCARB2-227ENST00000640957 RDH14Q9HBH5 336 aa12.9□□□□□ -0.34
SCARB2-227ENST00000640957 RCE1Q9Y256 329 aa12.9□□□□□ -0.34
SCARB2-227ENST00000640957 SGK494L7N484 410 aa12.9□□□□□ -0.34
SCARB2-227ENST00000640957 RNASET2O00584 256 aaKnown RBP12.9□□□□□ -0.34
SCARB2-227ENST00000640957 KCNJ13O60928 360 aa12.9□□□□□ -0.34
SCARB2-227ENST00000640957 IGF2P01344 180 aa12.9□□□□□ -0.34
SCARB2-227ENST00000640957 C8orf89P0DMQ9 161 aa12.9□□□□□ -0.34
SCARB2-227ENST00000640957 SELPP16109 830 aa12.9□□□□□ -0.34
SCARB2-227ENST00000640957 ACSL1P33121 698 aa12.9□□□□□ -0.34
SCARB2-227ENST00000640957 TRIM23P36406 574 aa12.9□□□□□ -0.34
SCARB2-227ENST00000640957 CTSCP53634 463 aa12.9□□□□□ -0.34
SCARB2-227ENST00000640957 CLDN2P57739 230 aa12.9□□□□□ -0.34
SCARB2-227ENST00000640957 RING1Q06587 406 aa12.9□□□□□ -0.34
SCARB2-227ENST00000640957 ZNF155Q12901 538 aaPredicted RBP12.9□□□□□ -0.34
SCARB2-227ENST00000640957 DUSP6Q16828 381 aa12.9□□□□□ -0.34
SCARB2-227ENST00000640957 ZNF630Q2M218 657 aaPredicted RBP12.9□□□□□ -0.34
SCARB2-227ENST00000640957 VASNQ6EMK4 673 aa12.9□□□□□ -0.34
SCARB2-227ENST00000640957 CPOQ8IVL8 374 aa12.9□□□□□ -0.34
SCARB2-227ENST00000640957 FBXO15Q8NCQ5 510 aaPredicted RBP12.9□□□□□ -0.34
SCARB2-227ENST00000640957 OR51L1Q8NGJ5 315 aa12.9□□□□□ -0.34
SCARB2-227ENST00000640957 LILRB1Q8NHL6 650 aaPredicted RBP12.9□□□□□ -0.34
SCARB2-227ENST00000640957 RPLP0P6Q8NHW5 317 aa12.9□□□□□ -0.34
SCARB2-227ENST00000640957 CLP1Q92989 425 aaKnown RBP12.9□□□□□ -0.34
SCARB2-227ENST00000640957 FATE1Q969F0 183 aa12.9□□□□□ -0.34
SCARB2-227ENST00000640957 ZNF416Q9BWM5 594 aa12.9□□□□□ -0.34
SCARB2-227ENST00000640957 ZNF436Q9C0F3 470 aaPredicted RBP12.9□□□□□ -0.34
SCARB2-227ENST00000640957 EMC7Q9NPA0 242 aa12.9□□□□□ -0.34
SCARB2-227ENST00000640957 STOX2Q9P2F5 926 aaPredicted RBP12.9□□□□□ -0.34
SCARB2-227ENST00000640957 LOC285556D6RIA3 1793 aa12.9□□□□□ -0.34
SCARB2-227ENST00000640957 PSMD9O00233 223 aa12.89□□□□□ -0.35
SCARB2-227ENST00000640957 FMO6PO60774 539 aa12.89□□□□□ -0.35
SCARB2-227ENST00000640957 MTRF1O75570 445 aaKnown RBP12.89□□□□□ -0.35
SCARB2-227ENST00000640957 HLA-DQB1P01920 261 aa12.89□□□□□ -0.35
SCARB2-227ENST00000640957 ACP2P11117 423 aa12.89□□□□□ -0.35
SCARB2-227ENST00000640957 ACP5P13686 325 aa12.89□□□□□ -0.35
SCARB2-227ENST00000640957 CD9P21926 228 aa12.89□□□□□ -0.35
SCARB2-227ENST00000640957 PTX3P26022 381 aaPredicted RBP12.89□□□□□ -0.35
SCARB2-227ENST00000640957 GAS1P54826 345 aa12.89□□□□□ -0.35
SCARB2-227ENST00000640957 ETFDHQ16134 617 aa12.89□□□□□ -0.35
SCARB2-227ENST00000640957 BEX5Q5H9J7 111 aa12.89□□□□□ -0.35
SCARB2-227ENST00000640957 LINGO2Q7L985 606 aa12.89□□□□□ -0.35
SCARB2-227ENST00000640957 KIAA1143Q96AT1 154 aaPredicted RBP12.89□□□□□ -0.35
SCARB2-227ENST00000640957 OR1F2PQ96R84 312 aa12.89□□□□□ -0.35
SCARB2-227ENST00000640957 C12orf57Q99622 126 aa12.89□□□□□ -0.35
SCARB2-227ENST00000640957 TREX2Q9BQ50 279 aaPredicted RBP12.89□□□□□ -0.35
SCARB2-227ENST00000640957 GINS4Q9BRT9 223 aa12.89□□□□□ -0.35
SCARB2-227ENST00000640957 ZDHHC4Q9NPG8 344 aa12.89□□□□□ -0.35
SCARB2-227ENST00000640957 PCDHB16Q9NRJ7 776 aa12.89□□□□□ -0.35
SCARB2-227ENST00000640957 HPF1Q9NWY4 346 aa12.89□□□□□ -0.35
SCARB2-227ENST00000640957 ZDHHC3Q9NYG2 299 aa12.89□□□□□ -0.35
SCARB2-227ENST00000640957 TAAR2Q9P1P5 351 aa12.89□□□□□ -0.35
SCARB2-227ENST00000640957 LSM7Q9UK45 103 aaKnown RBP12.89□□□□□ -0.35
SCARB2-227ENST00000640957 AK6Q9Y3D8 172 aaKnown RBP12.89□□□□□ -0.35
SCARB2-227ENST00000640957 HELZP42694 1942 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms