RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 MCHR1Q99705 422 aa15.48■□□□□ 0.07
HNRNPU-228ENST00000640306 MED18Q9BUE0 208 aa15.48■□□□□ 0.07
HNRNPU-228ENST00000640306 PINK1Q9BXM7 581 aa15.48■□□□□ 0.07
HNRNPU-228ENST00000640306 EXTL2Q9UBQ6 330 aa15.48■□□□□ 0.07
HNRNPU-228ENST00000640306 LIPT1Q9Y234 373 aa15.48■□□□□ 0.07
HNRNPU-228ENST00000640306 CENPVL1A0A0U1RR11 272 aa15.47■□□□□ 0.07
HNRNPU-228ENST00000640306 TRDV1A0A1B0GX56 115 aa15.47■□□□□ 0.07
HNRNPU-228ENST00000640306 SURF4O15260 269 aa15.47■□□□□ 0.07
HNRNPU-228ENST00000640306 PAHP00439 452 aa15.47■□□□□ 0.07
HNRNPU-228ENST00000640306 RPN2P04844 631 aa15.47■□□□□ 0.07
HNRNPU-228ENST00000640306 CHRNB1P11230 501 aa15.47■□□□□ 0.07
HNRNPU-228ENST00000640306 ERGP11308 486 aa15.47■□□□□ 0.07
HNRNPU-228ENST00000640306 ELK1P19419 428 aa15.47■□□□□ 0.07
HNRNPU-228ENST00000640306 HIST1H1TP22492 207 aaPredicted RBP15.47■□□□□ 0.07
HNRNPU-228ENST00000640306 CPN2P22792 545 aa15.47■□□□□ 0.07
HNRNPU-228ENST00000640306 PRDX1Q06830 199 aaKnown RBP15.47■□□□□ 0.07
HNRNPU-228ENST00000640306 KLHL12Q53G59 568 aa15.47■□□□□ 0.07
HNRNPU-228ENST00000640306 CCNJQ5T5M9 372 aa15.47■□□□□ 0.07
HNRNPU-228ENST00000640306 VASNQ6EMK4 673 aa15.47■□□□□ 0.07
HNRNPU-228ENST00000640306 KLHL36Q8N4N3 616 aa15.47■□□□□ 0.07
HNRNPU-228ENST00000640306 ARIH2OSQ8N7S6 290 aa15.47■□□□□ 0.07
HNRNPU-228ENST00000640306 ZNF485Q8NCK3 441 aa15.47■□□□□ 0.07
HNRNPU-228ENST00000640306 HCAR2Q8TDS4 363 aa15.47■□□□□ 0.07
HNRNPU-228ENST00000640306 SMG7Q92540 1137 aaKnown RBP15.47■□□□□ 0.07
HNRNPU-228ENST00000640306 SNAPC3Q92966 411 aa15.47■□□□□ 0.07
HNRNPU-228ENST00000640306 BCL2L10Q9HD36 194 aa15.47■□□□□ 0.07
HNRNPU-228ENST00000640306 H2AFY2Q9P0M6 372 aaPredicted RBP15.47■□□□□ 0.07
HNRNPU-228ENST00000640306 DEC1Q9P2X7 70 aa15.47■□□□□ 0.07
HNRNPU-228ENST00000640306 HSPB11Q9Y547 144 aa15.47■□□□□ 0.07
HNRNPU-228ENST00000640306 EDDM13A0A1B0GTR0 161 aa15.47■□□□□ 0.07
HNRNPU-228ENST00000640306 TBC1D3BA6NDS4 549 aa15.47■□□□□ 0.07
HNRNPU-228ENST00000640306 KDM4EB2RXH2 506 aaPredicted RBP15.47■□□□□ 0.07
HNRNPU-228ENST00000640306 HLA-DPB1P04440 258 aa15.47■□□□□ 0.07
HNRNPU-228ENST00000640306 MRPL3P09001 348 aaKnown RBP15.47■□□□□ 0.07
HNRNPU-228ENST00000640306 LINC00271P0C7V0 271 aa15.47■□□□□ 0.07
HNRNPU-228ENST00000640306 TRAPPC2P0DI81 140 aa15.47■□□□□ 0.07
HNRNPU-228ENST00000640306 TRAPPC2BP0DI82 140 aa15.47■□□□□ 0.07
HNRNPU-228ENST00000640306 DDX6P26196 483 aaKnown RBP eCLIP15.47■□□□□ 0.072e-7■■□□□ 14.1
HNRNPU-228ENST00000640306 FGF9P31371 208 aaPredicted RBP15.47■□□□□ 0.07
HNRNPU-228ENST00000640306 SOX9P48436 509 aa15.47■□□□□ 0.07
HNRNPU-228ENST00000640306 KIAA1211LQ6NV74 962 aa15.47■□□□□ 0.07
HNRNPU-228ENST00000640306 MZT2BQ6NZ67 158 aa15.47■□□□□ 0.07
HNRNPU-228ENST00000640306 TMEM91Q6ZNR0 172 aa15.47■□□□□ 0.07
HNRNPU-228ENST00000640306 ZNF765Q7L2R6 523 aa15.47■□□□□ 0.07
HNRNPU-228ENST00000640306 MRPL43Q8N983 215 aaKnown RBP15.47■□□□□ 0.07
HNRNPU-228ENST00000640306 SLC16A11Q8NCK7 471 aa15.47■□□□□ 0.07
HNRNPU-228ENST00000640306 GALNT6Q8NCL4 622 aa15.47■□□□□ 0.07
HNRNPU-228ENST00000640306 MS4A6EQ96DS6 147 aa15.47■□□□□ 0.07
HNRNPU-228ENST00000640306 PPIL3Q9H2H8 161 aaKnown RBP15.47■□□□□ 0.07
HNRNPU-228ENST00000640306 SPHK1Q9NYA1 384 aa15.47■□□□□ 0.07
HNRNPU-228ENST00000640306 ASB4Q9Y574 426 aa15.47■□□□□ 0.07
HNRNPU-228ENST00000640306 KIF26AQ9ULI4 1882 aaPredicted RBP15.47■□□□□ 0.07
HNRNPU-228ENST00000640306 A0A0G2JPF8 293 aa15.47■□□□□ 0.07
HNRNPU-228ENST00000640306 HNRNPCL2B2RXH8 293 aa15.47■□□□□ 0.07
HNRNPU-228ENST00000640306 HNRNPCL3B7ZW38 293 aa15.47■□□□□ 0.07
HNRNPU-228ENST00000640306 AKAP8O43823 692 aaKnown RBP15.47■□□□□ 0.07
HNRNPU-228ENST00000640306 REM1O75628 298 aa15.47■□□□□ 0.07
HNRNPU-228ENST00000640306 HNRNPCL4P0DMR1 293 aa15.47■□□□□ 0.07
HNRNPU-228ENST00000640306 DRD2P14416 443 aa15.47■□□□□ 0.07
HNRNPU-228ENST00000640306 TBXA2RP21731 343 aa15.47■□□□□ 0.07
HNRNPU-228ENST00000640306 GCGRP47871 477 aa15.47■□□□□ 0.07
HNRNPU-228ENST00000640306 AGFG1P52594 562 aaKnown RBP15.47■□□□□ 0.07
HNRNPU-228ENST00000640306 ST3GAL3Q11203 375 aa15.47■□□□□ 0.07
HNRNPU-228ENST00000640306 ARHGAP19Q14CB8 494 aa15.47■□□□□ 0.07
HNRNPU-228ENST00000640306 AADACL4Q5VUY2 407 aa15.47■□□□□ 0.07
HNRNPU-228ENST00000640306 RASSF6Q6ZTQ3 369 aa15.47■□□□□ 0.07
HNRNPU-228ENST00000640306 SHISA5Q8N114 240 aa15.47■□□□□ 0.07
HNRNPU-228ENST00000640306 POF1BQ8WVV4 589 aa15.47■□□□□ 0.07
HNRNPU-228ENST00000640306 DEDD2Q8WXF8 326 aa15.47■□□□□ 0.07
HNRNPU-228ENST00000640306 COX14Q96I36 57 aa15.47■□□□□ 0.07
HNRNPU-228ENST00000640306 TMEM43Q9BTV4 400 aa15.47■□□□□ 0.07
HNRNPU-228ENST00000640306 ENKD1Q9H0I2 346 aa15.47■□□□□ 0.07
HNRNPU-228ENST00000640306 SLA2Q9H6Q3 261 aa15.47■□□□□ 0.07
HNRNPU-228ENST00000640306 MRPS30Q9NP92 439 aaKnown RBP15.47■□□□□ 0.07
HNRNPU-228ENST00000640306 ACOXLQ9NUZ1 547 aa15.47■□□□□ 0.07
HNRNPU-228ENST00000640306 TAS2R7Q9NYW3 318 aa15.47■□□□□ 0.07
HNRNPU-228ENST00000640306 TNFRSF10DQ9UBN6 386 aa15.47■□□□□ 0.07
HNRNPU-228ENST00000640306 NUP210Q8TEM1 1887 aaPredicted RBP15.46■□□□□ 0.07
HNRNPU-228ENST00000640306 C12orf71A8MTZ7 269 aa15.46■□□□□ 0.07
HNRNPU-228ENST00000640306 ALX3O95076 343 aa15.46■□□□□ 0.07
HNRNPU-228ENST00000640306 ADH1CP00326 375 aa15.46■□□□□ 0.07
HNRNPU-228ENST00000640306 IFNGR2P38484 337 aa15.46■□□□□ 0.07
HNRNPU-228ENST00000640306 DSG2Q14126 1118 aa15.46■□□□□ 0.07
HNRNPU-228ENST00000640306 TMIEQ8NEW7 156 aa15.46■□□□□ 0.07
HNRNPU-228ENST00000640306 RIPOR3Q96MK2 946 aa15.46■□□□□ 0.07
HNRNPU-228ENST00000640306 CAMK1GQ96NX5 476 aa15.46■□□□□ 0.07
HNRNPU-228ENST00000640306 IL23AQ9NPF7 189 aa15.46■□□□□ 0.07
HNRNPU-228ENST00000640306 PRDM7Q9NQW5 492 aa15.46■□□□□ 0.07
HNRNPU-228ENST00000640306 MRPS18AQ9NVS2 196 aaKnown RBP15.46■□□□□ 0.07
HNRNPU-228ENST00000640306 SLC7A7Q9UM01 511 aa15.46■□□□□ 0.07
HNRNPU-228ENST00000640306 GTPBP1O00178 669 aaKnown RBP15.46■□□□□ 0.06
HNRNPU-228ENST00000640306 SEC14L5O43304 696 aa15.46■□□□□ 0.06
HNRNPU-228ENST00000640306 CLEC3AO75596 197 aa15.46■□□□□ 0.06
HNRNPU-228ENST00000640306 ARSBP15848 533 aa15.46■□□□□ 0.06
HNRNPU-228ENST00000640306 ATP5A1P25705 553 aaKnown RBP15.46■□□□□ 0.06
HNRNPU-228ENST00000640306 OR10A3P58181 314 aa15.46■□□□□ 0.06
HNRNPU-228ENST00000640306 ABATP80404 500 aa15.46■□□□□ 0.06
HNRNPU-228ENST00000640306 RPA4Q13156 261 aa15.46■□□□□ 0.06
HNRNPU-228ENST00000640306 AGERQ15109 404 aa15.46■□□□□ 0.06
HNRNPU-228ENST00000640306 EOGTQ5NDL2 527 aa15.46■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms