RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 PTGR1Q14914 329 aa15.21■□□□□ 0.03
CACNA1A-259ENST00000638114 IL23RQ5VWK5 629 aa15.21■□□□□ 0.03
CACNA1A-259ENST00000638114 CES4AQ5XG92 561 aa15.21■□□□□ 0.03
CACNA1A-259ENST00000638114 CDRT4Q8N9R6 151 aa15.21■□□□□ 0.03
CACNA1A-259ENST00000638114 RELL2Q8NC24 303 aaPredicted RBP15.21■□□□□ 0.03
CACNA1A-259ENST00000638114 TUBA1CQ9BQE3 449 aa15.21■□□□□ 0.03
CACNA1A-259ENST00000638114 DSN1Q9H410 356 aa15.21■□□□□ 0.03
CACNA1A-259ENST00000638114 KCNK9Q9NPC2 374 aa15.21■□□□□ 0.03
CACNA1A-259ENST00000638114 NTMQ9P121 344 aa15.21■□□□□ 0.03
CACNA1A-259ENST00000638114 KIAA1549Q9HCM3 1950 aa15.21■□□□□ 0.03
CACNA1A-259ENST00000638114 POLQO75417 2590 aa15.21■□□□□ 0.02
CACNA1A-259ENST00000638114 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.2■□□□□ 0.02
CACNA1A-259ENST00000638114 A0A1W2PRB8 838 aa15.2■□□□□ 0.02
CACNA1A-259ENST00000638114 BIRC5O15392 142 aa15.2■□□□□ 0.02
CACNA1A-259ENST00000638114 ZIC3O60481 467 aa15.2■□□□□ 0.02
CACNA1A-259ENST00000638114 NKX2-2O95096 273 aa15.2■□□□□ 0.02
CACNA1A-259ENST00000638114 IGKV1D-16P01601 117 aa15.2■□□□□ 0.02
CACNA1A-259ENST00000638114 MYZAPP0CAP1 466 aa15.2■□□□□ 0.02
CACNA1A-259ENST00000638114 ACP2P11117 423 aa15.2■□□□□ 0.02
CACNA1A-259ENST00000638114 LAMP1P11279 417 aa15.2■□□□□ 0.02
CACNA1A-259ENST00000638114 STARP49675 285 aa15.2■□□□□ 0.02
CACNA1A-259ENST00000638114 DSCR4P56555 118 aaPredicted RBP15.2■□□□□ 0.02
CACNA1A-259ENST00000638114 ABCE1P61221 599 aaKnown RBP15.2■□□□□ 0.02
CACNA1A-259ENST00000638114 PRR5P85299 388 aa15.2■□□□□ 0.02
CACNA1A-259ENST00000638114 PDCD2Q16342 344 aaPredicted RBP15.2■□□□□ 0.02
CACNA1A-259ENST00000638114 MFSD12Q6NUT3 480 aa15.2■□□□□ 0.02
CACNA1A-259ENST00000638114 MARCH3Q86UD3 253 aa15.2■□□□□ 0.02
CACNA1A-259ENST00000638114 FADS6Q8N9I5 356 aa15.2■□□□□ 0.02
CACNA1A-259ENST00000638114 OR2M3Q8NG83 312 aa15.2■□□□□ 0.02
CACNA1A-259ENST00000638114 ZPLD1Q8TCW7 415 aa15.2■□□□□ 0.02
CACNA1A-259ENST00000638114 JADE3Q92613 823 aa15.2■□□□□ 0.02
CACNA1A-259ENST00000638114 HOXB13Q92826 284 aaPredicted RBP15.2■□□□□ 0.02
CACNA1A-259ENST00000638114 GIMAP5Q96F15 307 aa15.2■□□□□ 0.02
CACNA1A-259ENST00000638114 PPP1R36Q96LQ0 422 aa15.2■□□□□ 0.02
CACNA1A-259ENST00000638114 TBL1XR1Q9BZK7 514 aa15.2■□□□□ 0.02
CACNA1A-259ENST00000638114 RTN4RQ9BZR6 473 aa15.2■□□□□ 0.02
CACNA1A-259ENST00000638114 ZNF395Q9H8N7 513 aaPredicted RBP15.2■□□□□ 0.02
CACNA1A-259ENST00000638114 CALHM2Q9HA72 323 aa15.2■□□□□ 0.02
CACNA1A-259ENST00000638114 MCCC2Q9HCC0 563 aa15.2■□□□□ 0.02
CACNA1A-259ENST00000638114 ZCCHC3Q9NUD5 404 aaKnown RBP15.2■□□□□ 0.02
CACNA1A-259ENST00000638114 ATAD3AQ9NVI7 634 aa15.2■□□□□ 0.02
CACNA1A-259ENST00000638114 MED11Q9P086 117 aa15.2■□□□□ 0.02
CACNA1A-259ENST00000638114 EIF3LQ9Y262 564 aaKnown RBP15.2■□□□□ 0.02
CACNA1A-259ENST00000638114 MRPS18CQ9Y3D5 142 aaKnown RBP15.2■□□□□ 0.02
CACNA1A-259ENST00000638114 SNX8Q9Y5X2 465 aa15.2■□□□□ 0.02
CACNA1A-259ENST00000638114 PDZD2O15018 2839 aa15.19■□□□□ 0.02
CACNA1A-259ENST00000638114 MBD3L4A6NDZ8 208 aaPredicted RBP15.19■□□□□ 0.02
CACNA1A-259ENST00000638114 MBD3L3A6NE82 208 aaPredicted RBP15.19■□□□□ 0.02
CACNA1A-259ENST00000638114 MBD3L5A6NJ08 208 aaPredicted RBP15.19■□□□□ 0.02
CACNA1A-259ENST00000638114 ZWINTO95229 277 aa15.19■□□□□ 0.02
CACNA1A-259ENST00000638114 CHMP24386 653 aa15.19■□□□□ 0.02
CACNA1A-259ENST00000638114 MAP3K8P41279 467 aa15.19■□□□□ 0.02
CACNA1A-259ENST00000638114 LHX2P50458 406 aa15.19■□□□□ 0.02
CACNA1A-259ENST00000638114 ASCL1P50553 236 aa15.19■□□□□ 0.02
CACNA1A-259ENST00000638114 ZNF136P52737 540 aa15.19■□□□□ 0.02
CACNA1A-259ENST00000638114 DGKQP52824 942 aa15.19■□□□□ 0.02
CACNA1A-259ENST00000638114 DLX5P56178 289 aa15.19■□□□□ 0.02
CACNA1A-259ENST00000638114 KRTAP10-9P60411 292 aa15.19■□□□□ 0.02
CACNA1A-259ENST00000638114 MYBPHQ13203 477 aa15.19■□□□□ 0.02
CACNA1A-259ENST00000638114 MLC1Q15049 377 aa15.19■□□□□ 0.02
CACNA1A-259ENST00000638114 GRAMD1BQ3KR37 738 aa15.19■□□□□ 0.02
CACNA1A-259ENST00000638114 CPTPQ5TA50 214 aa15.19■□□□□ 0.02
CACNA1A-259ENST00000638114 GALNT10Q86SR1 603 aa15.19■□□□□ 0.02
CACNA1A-259ENST00000638114 CROCCP2Q86T23 111 aa15.19■□□□□ 0.02
CACNA1A-259ENST00000638114 KRTCAP2Q8N6L1 136 aa15.19■□□□□ 0.02
CACNA1A-259ENST00000638114 ZNF781Q8N8C0 355 aa15.19■□□□□ 0.02
CACNA1A-259ENST00000638114 C9orf106Q8NAJ2 232 aa15.19■□□□□ 0.02
CACNA1A-259ENST00000638114 SLC16A11Q8NCK7 471 aa15.19■□□□□ 0.02
CACNA1A-259ENST00000638114 MBD3L2Q8NHZ7 208 aaPredicted RBP15.19■□□□□ 0.02
CACNA1A-259ENST00000638114 DUSP19Q8WTR2 217 aa15.19■□□□□ 0.02
CACNA1A-259ENST00000638114 FAM120BQ96EK7 910 aaKnown RBP15.19■□□□□ 0.02
CACNA1A-259ENST00000638114 OTUB1Q96FW1 271 aaPredicted RBP15.19■□□□□ 0.02
CACNA1A-259ENST00000638114 ZNF559Q9BR84 538 aa15.19■□□□□ 0.02
CACNA1A-259ENST00000638114 YIPF4Q9BSR8 244 aa15.19■□□□□ 0.02
CACNA1A-259ENST00000638114 PTGES2Q9H7Z7 377 aa15.19■□□□□ 0.02
CACNA1A-259ENST00000638114 SLC24A3Q9HC58 644 aa15.19■□□□□ 0.02
CACNA1A-259ENST00000638114 SIRT3Q9NTG7 399 aaPredicted RBP15.19■□□□□ 0.02
CACNA1A-259ENST00000638114 ZNF629Q9UEG4 869 aaPredicted RBP15.19■□□□□ 0.02
CACNA1A-259ENST00000638114 DOCK7Q96N67 2140 aa15.19■□□□□ 0.02
CACNA1A-259ENST00000638114 CLCA1A8K7I4 914 aa15.18■□□□□ 0.02
CACNA1A-259ENST00000638114 GMFGO60234 142 aa15.18■□□□□ 0.02
CACNA1A-259ENST00000638114 ALOX5P09917 674 aa15.18■□□□□ 0.02
CACNA1A-259ENST00000638114 DHRS4L1P0CG22 281 aa15.18■□□□□ 0.02
CACNA1A-259ENST00000638114 G6PDP11413 515 aa15.18■□□□□ 0.02
CACNA1A-259ENST00000638114 HK1P19367 917 aa15.18■□□□□ 0.02
CACNA1A-259ENST00000638114 PRPS1L1P21108 318 aa15.18■□□□□ 0.02
CACNA1A-259ENST00000638114 BGNP21810 368 aa15.18■□□□□ 0.02
CACNA1A-259ENST00000638114 UQCRC1P31930 480 aa15.18■□□□□ 0.02
CACNA1A-259ENST00000638114 SLC1A6P48664 564 aa15.18■□□□□ 0.02
CACNA1A-259ENST00000638114 PRIM2P49643 509 aa15.18■□□□□ 0.02
CACNA1A-259ENST00000638114 AGFG1P52594 562 aaKnown RBP15.18■□□□□ 0.02
CACNA1A-259ENST00000638114 MAD2L1Q13257 205 aaPredicted RBP15.18■□□□□ 0.02
CACNA1A-259ENST00000638114 MPP2Q14168 576 aa15.18■□□□□ 0.02
CACNA1A-259ENST00000638114 GANABQ14697 944 aaKnown RBP15.18■□□□□ 0.02
CACNA1A-259ENST00000638114 DUSP5Q16690 384 aa15.18■□□□□ 0.02
CACNA1A-259ENST00000638114 TNFAIP8L3Q5GJ75 292 aa15.18■□□□□ 0.02
CACNA1A-259ENST00000638114 RAET1LQ5VY80 246 aa15.18■□□□□ 0.02
CACNA1A-259ENST00000638114 FIGNL1Q6PIW4 674 aa15.18■□□□□ 0.02
CACNA1A-259ENST00000638114 COX18Q8N8Q8 333 aa15.18■□□□□ 0.02
CACNA1A-259ENST00000638114 NUDT8Q8WV74 236 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms