RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 DUSP19Q8WTR2 217 aa16.66■□□□□ 0.26
CLN6-220ENST00000637450 FIG4Q92562 907 aa16.66■□□□□ 0.26
CLN6-220ENST00000637450 LMF2Q9BU23 707 aaKnown RBP16.66■□□□□ 0.26
CLN6-220ENST00000637450 PTGES2Q9H7Z7 377 aa16.66■□□□□ 0.26
CLN6-220ENST00000637450 NEUROD4Q9HD90 331 aa16.66■□□□□ 0.26
CLN6-220ENST00000637450 Q9N2J8 555 aa16.66■□□□□ 0.26
CLN6-220ENST00000637450 MRTO4Q9UKD2 239 aaKnown RBP16.66■□□□□ 0.26
CLN6-220ENST00000637450 MED12LQ86YW9 2145 aa16.66■□□□□ 0.26
CLN6-220ENST00000637450 GLRA3O75311 464 aa16.65■□□□□ 0.26
CLN6-220ENST00000637450 SMNDC1O75940 238 aaKnown RBP eCLIP16.65■□□□□ 0.26
CLN6-220ENST00000637450 PROCP04070 461 aa16.65■□□□□ 0.26
CLN6-220ENST00000637450 IFI6P09912 130 aa16.65■□□□□ 0.26
CLN6-220ENST00000637450 CPOXP36551 454 aa16.65■□□□□ 0.26
CLN6-220ENST00000637450 CLK3P49761 638 aaKnown RBP16.65■□□□□ 0.26
CLN6-220ENST00000637450 DNAJB13P59910 316 aa16.65■□□□□ 0.26
CLN6-220ENST00000637450 STX5Q13190 355 aa16.65■□□□□ 0.26
CLN6-220ENST00000637450 KIAA0040Q15053 153 aa16.65■□□□□ 0.26
CLN6-220ENST00000637450 ZNHIT3Q15649 155 aaPredicted RBP16.65■□□□□ 0.26
CLN6-220ENST00000637450 GLYR1Q49A26 553 aaPredicted RBP16.65■□□□□ 0.26
CLN6-220ENST00000637450 VWA1Q6PCB0 445 aa16.65■□□□□ 0.26
CLN6-220ENST00000637450 ZNF474Q6S9Z5 364 aaPredicted RBP16.65■□□□□ 0.26
CLN6-220ENST00000637450 BTLAQ7Z6A9 289 aa16.65■□□□□ 0.26
CLN6-220ENST00000637450 MARCH3Q86UD3 253 aa16.65■□□□□ 0.26
CLN6-220ENST00000637450 CEP112Q8N8E3 955 aa16.65■□□□□ 0.26
CLN6-220ENST00000637450 C1GALT1C1Q96EU7 318 aa16.65■□□□□ 0.26
CLN6-220ENST00000637450 PGM2Q96G03 612 aa16.65■□□□□ 0.26
CLN6-220ENST00000637450 WFIKKN1Q96NZ8 548 aa16.65■□□□□ 0.26
CLN6-220ENST00000637450 PIGQQ9BRB3 760 aa16.65■□□□□ 0.26
CLN6-220ENST00000637450 TNFRSF12AQ9NP84 129 aa16.65■□□□□ 0.26
CLN6-220ENST00000637450 RRAGDQ9NQL2 400 aaPredicted RBP16.65■□□□□ 0.26
CLN6-220ENST00000637450 BEX4Q9NWD9 120 aaPredicted RBP16.65■□□□□ 0.26
CLN6-220ENST00000637450 EIF3LQ9Y262 564 aaKnown RBP16.65■□□□□ 0.26
CLN6-220ENST00000637450 CCL27Q9Y4X3 112 aa16.65■□□□□ 0.26
CLN6-220ENST00000637450 OR2M5A3KFT3 312 aa16.64■□□□□ 0.25
CLN6-220ENST00000637450 TTC36A6NLP5 189 aa16.64■□□□□ 0.25
CLN6-220ENST00000637450 CTIFO43310 598 aaKnown RBP16.64■□□□□ 0.25
CLN6-220ENST00000637450 CGAP01215 116 aa16.64■□□□□ 0.25
CLN6-220ENST00000637450 CD79BP40259 229 aa16.64■□□□□ 0.25
CLN6-220ENST00000637450 PSMD4P55036 377 aaKnown RBP16.64■□□□□ 0.25
CLN6-220ENST00000637450 CCDC153Q494R4 210 aa16.64■□□□□ 0.25
CLN6-220ENST00000637450 OR5M1Q8NGP8 315 aa16.64■□□□□ 0.25
CLN6-220ENST00000637450 METTL2AQ96IZ6 378 aaKnown RBP16.64■□□□□ 0.25
CLN6-220ENST00000637450 EGLN2Q96KS0 407 aa16.64■□□□□ 0.25
CLN6-220ENST00000637450 PINK1Q9BXM7 581 aa16.64■□□□□ 0.25
CLN6-220ENST00000637450 RNF122Q9H9V4 155 aa16.64■□□□□ 0.25
CLN6-220ENST00000637450 ZNF175Q9Y473 711 aa16.64■□□□□ 0.25
CLN6-220ENST00000637450 IGLV3-32A0A0A0MS00 114 aa16.63■□□□□ 0.25
CLN6-220ENST00000637450 NPIPB8E9PQR5 432 aa16.63■□□□□ 0.25
CLN6-220ENST00000637450 EMC8O43402 210 aa16.63■□□□□ 0.25
CLN6-220ENST00000637450 PLIN3O60664 434 aa16.63■□□□□ 0.25
CLN6-220ENST00000637450 SEC22BO75396 215 aa16.63■□□□□ 0.25
CLN6-220ENST00000637450 CRCPO75575 148 aa16.63■□□□□ 0.25
CLN6-220ENST00000637450 UTS2O95399 124 aa16.63■□□□□ 0.25
CLN6-220ENST00000637450 UROSP10746 265 aa16.63■□□□□ 0.25
CLN6-220ENST00000637450 PRPH2P23942 346 aa16.63■□□□□ 0.25
CLN6-220ENST00000637450 GABRA3P34903 492 aa16.63■□□□□ 0.25
CLN6-220ENST00000637450 CCT5P48643 541 aa16.63■□□□□ 0.25
CLN6-220ENST00000637450 CLDN20P56880 219 aa16.63■□□□□ 0.25
CLN6-220ENST00000637450 OCRLQ01968 901 aa16.63■□□□□ 0.25
CLN6-220ENST00000637450 C17orf67Q0P5P2 114 aa16.63■□□□□ 0.25
CLN6-220ENST00000637450 CFAP157Q5JU67 520 aa16.63■□□□□ 0.25
CLN6-220ENST00000637450 APOOLQ6UXV4 268 aa16.63■□□□□ 0.25
CLN6-220ENST00000637450 ZNF551Q7Z340 670 aaPredicted RBP16.63■□□□□ 0.25
CLN6-220ENST00000637450 CXorf67Q86X51 503 aaPredicted RBP16.63■□□□□ 0.25
CLN6-220ENST00000637450 KRTAP1-3Q8IUG1 177 aa16.63■□□□□ 0.25
CLN6-220ENST00000637450 FAM111AQ96PZ2 611 aa16.63■□□□□ 0.25
CLN6-220ENST00000637450 RHOXF2Q9BQY4 288 aa16.63■□□□□ 0.25
CLN6-220ENST00000637450 OPN3Q9H1Y3 402 aaPredicted RBP16.63■□□□□ 0.25
CLN6-220ENST00000637450 C3orf14Q9HBI5 128 aa16.63■□□□□ 0.25
CLN6-220ENST00000637450 OXSMQ9NWU1 459 aa16.63■□□□□ 0.25
CLN6-220ENST00000637450 ELOVL5Q9NYP7 299 aa16.63■□□□□ 0.25
CLN6-220ENST00000637450 GXYLT2A0PJZ3 443 aa16.62■□□□□ 0.25
CLN6-220ENST00000637450 DEFB108AA8MXU0 73 aa16.62■□□□□ 0.25
CLN6-220ENST00000637450 H3BML4 177 aa16.62■□□□□ 0.25
CLN6-220ENST00000637450 KIF2AO00139 706 aaPredicted RBP16.62■□□□□ 0.25
CLN6-220ENST00000637450 SIAH2O43255 324 aa16.62■□□□□ 0.25
CLN6-220ENST00000637450 SEC14L5O43304 696 aa16.62■□□□□ 0.25
CLN6-220ENST00000637450 ANGPTL1O95841 491 aa16.62■□□□□ 0.25
CLN6-220ENST00000637450 IGKV1D-16P01601 117 aa16.62■□□□□ 0.25
CLN6-220ENST00000637450 PRPS2P11908 318 aa16.62■□□□□ 0.25
CLN6-220ENST00000637450 CRHR1P34998 444 aa16.62■□□□□ 0.25
CLN6-220ENST00000637450 MAP3K8P41279 467 aa16.62■□□□□ 0.25
CLN6-220ENST00000637450 RFX3P48380 749 aa16.62■□□□□ 0.25
CLN6-220ENST00000637450 SIRPAP78324 504 aa16.62■□□□□ 0.25
CLN6-220ENST00000637450 NKX6-1P78426 367 aaPredicted RBP16.62■□□□□ 0.25
CLN6-220ENST00000637450 PRR5P85299 388 aa16.62■□□□□ 0.25
CLN6-220ENST00000637450 PON3Q15166 354 aa16.62■□□□□ 0.25
CLN6-220ENST00000637450 GUSBP1Q15486 140 aa16.62■□□□□ 0.25
CLN6-220ENST00000637450 TMEM44Q2T9K0 475 aa16.62■□□□□ 0.25
CLN6-220ENST00000637450 METTL25Q8N6Q8 603 aa16.62■□□□□ 0.25
CLN6-220ENST00000637450 KIF18AQ8NI77 898 aa16.62■□□□□ 0.25
CLN6-220ENST00000637450 FNDC9Q8TBE3 224 aa16.62■□□□□ 0.25
CLN6-220ENST00000637450 HOXB13Q92826 284 aaPredicted RBP16.62■□□□□ 0.25
CLN6-220ENST00000637450 ZNF845Q96IR2 970 aaPredicted RBP16.62■□□□□ 0.25
CLN6-220ENST00000637450 SLC39A3Q9BRY0 314 aa16.62■□□□□ 0.25
CLN6-220ENST00000637450 TBL1XR1Q9BZK7 514 aa16.62■□□□□ 0.25
CLN6-220ENST00000637450 KLHL28Q9NXS3 571 aa16.62■□□□□ 0.25
CLN6-220ENST00000637450 C6orf203Q9P0P8 240 aaPredicted RBP16.62■□□□□ 0.25
CLN6-220ENST00000637450 AP4B1Q9Y6B7 739 aa16.62■□□□□ 0.25
CLN6-220ENST00000637450 KCNH1O95259 989 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms