RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 EGLN2Q96KS0 407 aa16.24■□□□□ 0.19
PNKP-225ENST00000636214 UCN2Q96RP3 112 aa16.24■□□□□ 0.19
PNKP-225ENST00000636214 PIGQQ9BRB3 760 aa16.24■□□□□ 0.19
PNKP-225ENST00000636214 REEP4Q9H6H4 257 aa16.24■□□□□ 0.19
PNKP-225ENST00000636214 MKS1Q9NXB0 559 aa16.24■□□□□ 0.19
PNKP-225ENST00000636214 MED11Q9P086 117 aa16.24■□□□□ 0.19
PNKP-225ENST00000636214 PTGDR2Q9Y5Y4 395 aa16.24■□□□□ 0.19
PNKP-225ENST00000636214 UQCRHLA0A096LP55 91 aa16.23■□□□□ 0.19
PNKP-225ENST00000636214 TMEM114B3SHH9 223 aa16.23■□□□□ 0.19
PNKP-225ENST00000636214 LINC01387J3KSC0 135 aa16.23■□□□□ 0.19
PNKP-225ENST00000636214 FADS1O60427 444 aa16.23■□□□□ 0.19
PNKP-225ENST00000636214 UTS2O95399 124 aa16.23■□□□□ 0.19
PNKP-225ENST00000636214 PSMG1O95456 288 aa16.23■□□□□ 0.19
PNKP-225ENST00000636214 EPXP11678 715 aa16.23■□□□□ 0.19
PNKP-225ENST00000636214 HPCAL1P37235 193 aa16.23■□□□□ 0.19
PNKP-225ENST00000636214 CLDN18P56856 261 aa16.23■□□□□ 0.19
PNKP-225ENST00000636214 KIAA0040Q15053 153 aa16.23■□□□□ 0.19
PNKP-225ENST00000636214 BCL2A1Q16548 175 aa16.23■□□□□ 0.19
PNKP-225ENST00000636214 KANK2Q63ZY3 851 aa16.23■□□□□ 0.19
PNKP-225ENST00000636214 OR2A2Q6IF42 318 aa16.23■□□□□ 0.19
PNKP-225ENST00000636214 ANKRD26P1Q6NSI1 321 aa16.23■□□□□ 0.19
PNKP-225ENST00000636214 RNF165Q6ZSG1 346 aa16.23■□□□□ 0.19
PNKP-225ENST00000636214 R3HCC1LQ7Z5L2 792 aaKnown RBP16.23■□□□□ 0.19
PNKP-225ENST00000636214 CDRT4Q8N9R6 151 aa16.23■□□□□ 0.19
PNKP-225ENST00000636214 CHDHQ8NE62 594 aaPredicted RBP16.23■□□□□ 0.19
PNKP-225ENST00000636214 OR2W6PQ8NHA6 318 aa16.23■□□□□ 0.19
PNKP-225ENST00000636214 CLHC1Q8NHS4 586 aa16.23■□□□□ 0.19
PNKP-225ENST00000636214 RNF138Q8WVD3 245 aa16.23■□□□□ 0.19
PNKP-225ENST00000636214 SLC9A6Q92581 669 aa16.23■□□□□ 0.19
PNKP-225ENST00000636214 FAM111AQ96PZ2 611 aa16.23■□□□□ 0.19
PNKP-225ENST00000636214 CLCF1Q9UBD9 225 aa16.23■□□□□ 0.19
PNKP-225ENST00000636214 STOML1Q9UBI4 398 aa16.23■□□□□ 0.19
PNKP-225ENST00000636214 PACSIN3Q9UKS6 424 aa16.23■□□□□ 0.19
PNKP-225ENST00000636214 CCL27Q9Y4X3 112 aa16.23■□□□□ 0.19
PNKP-225ENST00000636214 MTORP42345 2549 aa16.23■□□□□ 0.19
PNKP-225ENST00000636214 SLC22A20A6NK97 555 aa16.22■□□□□ 0.19
PNKP-225ENST00000636214 SEC14L5O43304 696 aa16.22■□□□□ 0.19
PNKP-225ENST00000636214 ZIC3O60481 467 aa16.22■□□□□ 0.19
PNKP-225ENST00000636214 NPHS1O60500 1241 aa16.22■□□□□ 0.19
PNKP-225ENST00000636214 GOSR1O95249 250 aa16.22■□□□□ 0.19
PNKP-225ENST00000636214 SDC1P18827 310 aa16.22■□□□□ 0.19
PNKP-225ENST00000636214 RPL3P39023 403 aaKnown RBP16.22■□□□□ 0.19
PNKP-225ENST00000636214 IST1P53990 364 aa16.22■□□□□ 0.19
PNKP-225ENST00000636214 RIPPLY3P57055 190 aa16.22■□□□□ 0.19
PNKP-225ENST00000636214 RPS3AP61247 264 aaKnown RBP16.22■□□□□ 0.19
PNKP-225ENST00000636214 FOXF2Q12947 444 aa16.22■□□□□ 0.19
PNKP-225ENST00000636214 ADGRE4PQ86SQ3 457 aa16.22■□□□□ 0.19
PNKP-225ENST00000636214 MARCH3Q86UD3 253 aa16.22■□□□□ 0.19
PNKP-225ENST00000636214 CNEP1R1Q8N9A8 125 aa16.22■□□□□ 0.19
PNKP-225ENST00000636214 FADS6Q8N9I5 356 aa16.22■□□□□ 0.19
PNKP-225ENST00000636214 NUP43Q8NFH3 380 aa16.22■□□□□ 0.19
PNKP-225ENST00000636214 OR2M3Q8NG83 312 aa16.22■□□□□ 0.19
PNKP-225ENST00000636214 LINC01560Q8TB33 94 aa16.22■□□□□ 0.19
PNKP-225ENST00000636214 DUSP19Q8WTR2 217 aa16.22■□□□□ 0.19
PNKP-225ENST00000636214 TWIST2Q8WVJ9 160 aa16.22■□□□□ 0.19
PNKP-225ENST00000636214 CIDECQ96AQ7 238 aaPredicted RBP16.22■□□□□ 0.19
PNKP-225ENST00000636214 CHMP6Q96FZ7 201 aa16.22■□□□□ 0.19
PNKP-225ENST00000636214 PPP3R2Q96LZ3 170 aa16.22■□□□□ 0.19
PNKP-225ENST00000636214 MS4A4EQ96PG1 132 aa16.22■□□□□ 0.19
PNKP-225ENST00000636214 ACSS1Q9NUB1 689 aaPredicted RBP16.22■□□□□ 0.19
PNKP-225ENST00000636214 JKAMPQ9P055 326 aa16.22■□□□□ 0.19
PNKP-225ENST00000636214 ST6GALNAC2Q9UJ37 374 aa16.22■□□□□ 0.19
PNKP-225ENST00000636214 DNAJC15Q9Y5T4 150 aa16.22■□□□□ 0.19
PNKP-225ENST00000636214 ITPR3Q14573 2671 aa16.22■□□□□ 0.19
PNKP-225ENST00000636214 H3BML4 177 aa16.21■□□□□ 0.19
PNKP-225ENST00000636214 CASKO14936 926 aa16.21■□□□□ 0.19
PNKP-225ENST00000636214 TBX19O60806 448 aa16.21■□□□□ 0.19
PNKP-225ENST00000636214 ANGPTL1O95841 491 aa16.21■□□□□ 0.19
PNKP-225ENST00000636214 CRHP06850 196 aa16.21■□□□□ 0.19
PNKP-225ENST00000636214 NUDT17P0C025 328 aa16.21■□□□□ 0.19
PNKP-225ENST00000636214 HPGDP15428 266 aa16.21■□□□□ 0.19
PNKP-225ENST00000636214 ALDH3A1P30838 453 aa16.21■□□□□ 0.19
PNKP-225ENST00000636214 CPOXP36551 454 aa16.21■□□□□ 0.19
PNKP-225ENST00000636214 PRR5P85299 388 aa16.21■□□□□ 0.19
PNKP-225ENST00000636214 C17orf67Q0P5P2 114 aa16.21■□□□□ 0.19
PNKP-225ENST00000636214 DAZAP2Q15038 168 aaPredicted RBP16.21■□□□□ 0.19
PNKP-225ENST00000636214 PLXDC2Q6UX71 529 aa16.21■□□□□ 0.19
PNKP-225ENST00000636214 LRIG3Q6UXM1 1119 aa16.21■□□□□ 0.19
PNKP-225ENST00000636214 Q6ZSR9 355 aa16.21■□□□□ 0.19
PNKP-225ENST00000636214 TRABD2AQ86V40 505 aa16.21■□□□□ 0.19
PNKP-225ENST00000636214 CDC20BQ86Y33 519 aa16.21■□□□□ 0.19
PNKP-225ENST00000636214 BANPQ8N9N5 519 aa16.21■□□□□ 0.19
PNKP-225ENST00000636214 OR2T11Q8NH01 316 aa16.21■□□□□ 0.19
PNKP-225ENST00000636214 SMPDL3BQ92485 455 aa16.21■□□□□ 0.19
PNKP-225ENST00000636214 JADE3Q92613 823 aa16.21■□□□□ 0.19
PNKP-225ENST00000636214 MTERF3Q96E29 417 aa16.21■□□□□ 0.19
PNKP-225ENST00000636214 C1GALT1C1Q96EU7 318 aa16.21■□□□□ 0.19
PNKP-225ENST00000636214 GALNT8Q9NY28 637 aa16.21■□□□□ 0.19
PNKP-225ENST00000636214 FLRT3Q9NZU0 649 aa16.21■□□□□ 0.19
PNKP-225ENST00000636214 TRAF6Q9Y4K3 522 aa16.21■□□□□ 0.19
PNKP-225ENST00000636214 GXYLT2A0PJZ3 443 aa16.2■□□□□ 0.18
PNKP-225ENST00000636214 C17orf51A8MQB3 221 aa16.2■□□□□ 0.18
PNKP-225ENST00000636214 LSM1O15116 133 aaKnown RBP16.2■□□□□ 0.18
PNKP-225ENST00000636214 EMC8O43402 210 aa16.2■□□□□ 0.18
PNKP-225ENST00000636214 HCRTR2O43614 444 aa16.2■□□□□ 0.18
PNKP-225ENST00000636214 SPAG7O75391 227 aa16.2■□□□□ 0.18
PNKP-225ENST00000636214 SMNDC1O75940 238 aaKnown RBP eCLIP16.2■□□□□ 0.18
PNKP-225ENST00000636214 ALOX5P09917 674 aa16.2■□□□□ 0.18
PNKP-225ENST00000636214 SERPINB5P36952 375 aa16.2■□□□□ 0.18
PNKP-225ENST00000636214 GLYR1Q49A26 553 aaPredicted RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms