RNA–Protein interactions for RNA: ENST00000635917.1

CACNA1A-219, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 1,832 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-219	ENST00000635917	KCNK2	O95069	426 aa		11.63	□□□□□ -0.55
CACNA1A-219	ENST00000635917	NID1	P14543	1247 aa		11.63	□□□□□ -0.55
CACNA1A-219	ENST00000635917	PCSK6	P29122	969 aa		11.63	□□□□□ -0.55
CACNA1A-219	ENST00000635917	SSTR4	P31391	388 aa		11.63	□□□□□ -0.55
CACNA1A-219	ENST00000635917	GABRA3	P34903	492 aa		11.63	□□□□□ -0.55
CACNA1A-219	ENST00000635917	POU6F2	P78424	691 aa	Predicted RBP	11.63	□□□□□ -0.55
CACNA1A-219	ENST00000635917	STX4	Q12846	297 aa		11.63	□□□□□ -0.55
CACNA1A-219	ENST00000635917	GPR68	Q15743	365 aa		11.63	□□□□□ -0.55
CACNA1A-219	ENST00000635917	HLA-B	Q31612	363 aa		11.63	□□□□□ -0.55
CACNA1A-219	ENST00000635917	PRAMEF17	Q5VTA0	474 aa		11.63	□□□□□ -0.55
CACNA1A-219	ENST00000635917	GPR141	Q7Z602	305 aa		11.63	□□□□□ -0.55
CACNA1A-219	ENST00000635917	ZNF615	Q8N8J6	731 aa		11.63	□□□□□ -0.55
CACNA1A-219	ENST00000635917	COX18	Q8N8Q8	333 aa		11.63	□□□□□ -0.55
CACNA1A-219	ENST00000635917	FAM181A	Q8N9Y4	354 aa		11.63	□□□□□ -0.55
CACNA1A-219	ENST00000635917	FAM81A	Q8TBF8	368 aa		11.63	□□□□□ -0.55
CACNA1A-219	ENST00000635917	FKBP10	Q96AY3	582 aa		11.63	□□□□□ -0.55
CACNA1A-219	ENST00000635917	ZNF501	Q96CX3	271 aa	Predicted RBP	11.63	□□□□□ -0.55
CACNA1A-219	ENST00000635917	RBM18	Q96H35	190 aa	Known RBP	11.63	□□□□□ -0.55
CACNA1A-219	ENST00000635917	NODAL	Q96S42	347 aa		11.63	□□□□□ -0.55
CACNA1A-219	ENST00000635917	TSC22D3	Q99576	134 aa		11.63	□□□□□ -0.55
CACNA1A-219	ENST00000635917	UCK2	Q9BZX2	261 aa		11.63	□□□□□ -0.55
CACNA1A-219	ENST00000635917	FSCN3	Q9NQT6	498 aa		11.63	□□□□□ -0.55
CACNA1A-219	ENST00000635917	FKBP14	Q9NWM8	211 aa		11.63	□□□□□ -0.55
CACNA1A-219	ENST00000635917	PCDHGA10	Q9Y5H3	936 aa		11.63	□□□□□ -0.55
CACNA1A-219	ENST00000635917		A0A1W2PQM1	296 aa		11.62	□□□□□ -0.55
CACNA1A-219	ENST00000635917	CDHR4	A6H8M9	788 aa		11.62	□□□□□ -0.55
CACNA1A-219	ENST00000635917	PTGES3L	E9PB15	166 aa		11.62	□□□□□ -0.55
CACNA1A-219	ENST00000635917	TOX3	O15405	576 aa	Predicted RBP	11.62	□□□□□ -0.55
CACNA1A-219	ENST00000635917	BCAS1	O75363	584 aa	Predicted RBP	11.62	□□□□□ -0.55
CACNA1A-219	ENST00000635917	IGKV1D-16	P01601	117 aa		11.62	□□□□□ -0.55
CACNA1A-219	ENST00000635917	DBI	P07108	87 aa	Known RBP	11.62	□□□□□ -0.55
CACNA1A-219	ENST00000635917	CT45A8	P0DMV1	189 aa		11.62	□□□□□ -0.55
CACNA1A-219	ENST00000635917	CT45A9	P0DMV2	189 aa		11.62	□□□□□ -0.55
CACNA1A-219	ENST00000635917	ITIH1	P19827	911 aa		11.62	□□□□□ -0.55
CACNA1A-219	ENST00000635917	DCK	P27707	260 aa		11.62	□□□□□ -0.55
CACNA1A-219	ENST00000635917	ALDH6A1	Q02252	535 aa	Known RBP	11.62	□□□□□ -0.55
CACNA1A-219	ENST00000635917	EMX1	Q04741	257 aa	Predicted RBP	11.62	□□□□□ -0.55
CACNA1A-219	ENST00000635917	LARS2	Q15031	903 aa	Known RBP	11.62	□□□□□ -0.55
CACNA1A-219	ENST00000635917	NEDD8	Q15843	81 aa		11.62	□□□□□ -0.55
CACNA1A-219	ENST00000635917	CT45A2	Q5DJT8	189 aa		11.62	□□□□□ -0.55
CACNA1A-219	ENST00000635917	ENTPD8	Q5MY95	495 aa		11.62	□□□□□ -0.55
CACNA1A-219	ENST00000635917	PERM1	Q5SV97	790 aa		11.62	□□□□□ -0.55
CACNA1A-219	ENST00000635917	TMEM236	Q5W0B7	351 aa		11.62	□□□□□ -0.55
CACNA1A-219	ENST00000635917	GUSBP11	Q6P575	273 aa		11.62	□□□□□ -0.55
CACNA1A-219	ENST00000635917	FIGNL1	Q6PIW4	674 aa		11.62	□□□□□ -0.55
CACNA1A-219	ENST00000635917	NPSR1	Q6W5P4	371 aa		11.62	□□□□□ -0.55
CACNA1A-219	ENST00000635917	TTLL10	Q6ZVT0	673 aa		11.62	□□□□□ -0.55
CACNA1A-219	ENST00000635917	LINC00471	Q8N535	108 aa		11.62	□□□□□ -0.55
CACNA1A-219	ENST00000635917	GPR151	Q8TDV0	419 aa		11.62	□□□□□ -0.55
CACNA1A-219	ENST00000635917	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	11.62	□□□□□ -0.55
CACNA1A-219	ENST00000635917	NMD3	Q96D46	503 aa	Known RBP	11.62	□□□□□ -0.55
CACNA1A-219	ENST00000635917	ZNF578	Q96N58	590 aa	Predicted RBP	11.62	□□□□□ -0.55
CACNA1A-219	ENST00000635917	OR1F2P	Q96R84	312 aa		11.62	□□□□□ -0.55
CACNA1A-219	ENST00000635917	FANCE	Q9HB96	536 aa		11.62	□□□□□ -0.55
CACNA1A-219	ENST00000635917	CAPN10	Q9HC96	672 aa		11.62	□□□□□ -0.55
CACNA1A-219	ENST00000635917	CTPS2	Q9NRF8	586 aa		11.62	□□□□□ -0.55
CACNA1A-219	ENST00000635917	PTTG2	Q9NZH5	202 aa		11.62	□□□□□ -0.55
CACNA1A-219	ENST00000635917	DHCR7	Q9UBM7	475 aa	Known RBP	11.62	□□□□□ -0.55
CACNA1A-219	ENST00000635917	RSL24D1	Q9UHA3	163 aa	Known RBP	11.62	□□□□□ -0.55
CACNA1A-219	ENST00000635917	CDC14A	Q9UNH5	594 aa		11.62	□□□□□ -0.55
CACNA1A-219	ENST00000635917	NTNG1	Q9Y2I2	539 aa		11.62	□□□□□ -0.55
CACNA1A-219	ENST00000635917	TPRKB	Q9Y3C4	175 aa		11.62	□□□□□ -0.55
CACNA1A-219	ENST00000635917	MAU2	Q9Y6X3	613 aa		11.62	□□□□□ -0.55
CACNA1A-219	ENST00000635917	CFAP54	Q96N23	3096 aa		11.61	□□□□□ -0.55
CACNA1A-219	ENST00000635917	NPIPB9	F8W1W9	429 aa		11.61	□□□□□ -0.55
CACNA1A-219	ENST00000635917	SIGLEC6	O43699	453 aa		11.61	□□□□□ -0.55
CACNA1A-219	ENST00000635917	MRPS14	O60783	128 aa	Known RBP	11.61	□□□□□ -0.55
CACNA1A-219	ENST00000635917	LYPD3	O95274	346 aa		11.61	□□□□□ -0.55
CACNA1A-219	ENST00000635917	IGFBP1	P08833	259 aa	Predicted RBP	11.61	□□□□□ -0.55
CACNA1A-219	ENST00000635917	OR1D4	P47884	311 aa		11.61	□□□□□ -0.55
CACNA1A-219	ENST00000635917	GSS	P48637	474 aa		11.61	□□□□□ -0.55
CACNA1A-219	ENST00000635917	MASP1	P48740	699 aa		11.61	□□□□□ -0.55
CACNA1A-219	ENST00000635917	PPM1F	P49593	454 aa	Predicted RBP	11.61	□□□□□ -0.55
CACNA1A-219	ENST00000635917	RGS8	P57771	180 aa	Predicted RBP	11.61	□□□□□ -0.55
CACNA1A-219	ENST00000635917	CSNK2B	P67870	215 aa		11.61	□□□□□ -0.55
CACNA1A-219	ENST00000635917	HOXC5	Q00444	222 aa		11.61	□□□□□ -0.55
CACNA1A-219	ENST00000635917	CSTF1	Q05048	431 aa	Known RBP	11.61	□□□□□ -0.55
CACNA1A-219	ENST00000635917	COX10	Q12887	443 aa		11.61	□□□□□ -0.55
CACNA1A-219	ENST00000635917	FOXD4	Q12950	439 aa	Predicted RBP	11.61	□□□□□ -0.55
CACNA1A-219	ENST00000635917	TARDBP	Q13148	414 aa	Known RBP eCLIP	11.61	□□□□□ -0.55
CACNA1A-219	ENST00000635917	BIK	Q13323	160 aa		11.61	□□□□□ -0.55
CACNA1A-219	ENST00000635917	MRPL2	Q5T653	305 aa	Known RBP	11.61	□□□□□ -0.55
CACNA1A-219	ENST00000635917	TMEM71	Q6P5X7	295 aa		11.61	□□□□□ -0.55
CACNA1A-219	ENST00000635917	ARHGAP22	Q7Z5H3	698 aa		11.61	□□□□□ -0.55
CACNA1A-219	ENST00000635917	OR4N2	Q8NGD1	307 aa		11.61	□□□□□ -0.55
CACNA1A-219	ENST00000635917	C16orf52	Q8NHV5	167 aa		11.61	□□□□□ -0.55
CACNA1A-219	ENST00000635917	FAR1	Q8WVX9	515 aa		11.61	□□□□□ -0.55
CACNA1A-219	ENST00000635917	FGF11	Q92914	225 aa		11.61	□□□□□ -0.55
CACNA1A-219	ENST00000635917	MUL1	Q969V5	352 aa		11.61	□□□□□ -0.55
CACNA1A-219	ENST00000635917	ISOC1	Q96CN7	298 aa		11.61	□□□□□ -0.55
CACNA1A-219	ENST00000635917	NECAB3	Q96P71	396 aa	Predicted RBP	11.61	□□□□□ -0.55
CACNA1A-219	ENST00000635917	DGAT2	Q96PD7	388 aa		11.61	□□□□□ -0.55
CACNA1A-219	ENST00000635917	LHPP	Q9H008	270 aa		11.61	□□□□□ -0.55
CACNA1A-219	ENST00000635917	IRAK4	Q9NWZ3	460 aa		11.61	□□□□□ -0.55
CACNA1A-219	ENST00000635917	KLHL28	Q9NXS3	571 aa		11.61	□□□□□ -0.55
CACNA1A-219	ENST00000635917	ERVK-18	Q9QC07	812 aa		11.61	□□□□□ -0.55
CACNA1A-219	ENST00000635917	PSORS1C1	Q9UIG5	152 aa		11.61	□□□□□ -0.55
CACNA1A-219	ENST00000635917	ZNF232	Q9UNY5	417 aa		11.61	□□□□□ -0.55
CACNA1A-219	ENST00000635917	MMACHC	Q9Y4U1	282 aa		11.61	□□□□□ -0.55
CACNA1A-219	ENST00000635917	WDFY3	Q8IZQ1	3526 aa		11.61	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms