RNA–Protein interactions for RNA: ENST00000629179.1

PNKP-223, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 4

Gene PNKP, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-223ENST00000629179 HOXD4P09016 255 aaPredicted RBP12.92□□□□□ -0.34
PNKP-223ENST00000629179 ALOX5P09917 674 aa12.92□□□□□ -0.34
PNKP-223ENST00000629179 KITP10721 976 aa12.92□□□□□ -0.34
PNKP-223ENST00000629179 GABRA1P14867 456 aa12.92□□□□□ -0.34
PNKP-223ENST00000629179 TCEA1P23193 301 aaKnown RBP12.92□□□□□ -0.34
PNKP-223ENST00000629179 CCT3P49368 545 aaKnown RBP12.92□□□□□ -0.34
PNKP-223ENST00000629179 PSMD4P55036 377 aaKnown RBP12.92□□□□□ -0.34
PNKP-223ENST00000629179 C21orf58P58505 322 aa12.92□□□□□ -0.34
PNKP-223ENST00000629179 PRR5P85299 388 aa12.92□□□□□ -0.34
PNKP-223ENST00000629179 STX5Q13190 355 aa12.92□□□□□ -0.34
PNKP-223ENST00000629179 DUSP5Q16690 384 aa12.92□□□□□ -0.34
PNKP-223ENST00000629179 GRAMD1BQ3KR37 738 aa12.92□□□□□ -0.34
PNKP-223ENST00000629179 LSM12Q3MHD2 195 aaKnown RBP12.92□□□□□ -0.34
PNKP-223ENST00000629179 NHSL2Q5HYW2 709 aa12.92□□□□□ -0.34
PNKP-223ENST00000629179 EXOSC6Q5RKV6 272 aaKnown RBP12.92□□□□□ -0.34
PNKP-223ENST00000629179 ATG16L1Q676U5 607 aa12.92□□□□□ -0.34
PNKP-223ENST00000629179 OR4F3Q6IEY1 312 aa12.92□□□□□ -0.34
PNKP-223ENST00000629179 MARCH3Q86UD3 253 aa12.92□□□□□ -0.34
PNKP-223ENST00000629179 NATD1Q8N6N6 113 aa12.92□□□□□ -0.34
PNKP-223ENST00000629179 PSMA8Q8TAA3 256 aa12.92□□□□□ -0.34
PNKP-223ENST00000629179 ASB5Q8WWX0 329 aa12.92□□□□□ -0.34
PNKP-223ENST00000629179 JADE3Q92613 823 aa12.92□□□□□ -0.34
PNKP-223ENST00000629179 UCK2Q9BZX2 261 aa12.92□□□□□ -0.34
PNKP-223ENST00000629179 DPY30Q9C005 99 aa12.92□□□□□ -0.34
PNKP-223ENST00000629179 BHLHE41Q9C0J9 482 aaPredicted RBP12.92□□□□□ -0.34
PNKP-223ENST00000629179 OR2B2Q9GZK3 357 aa12.92□□□□□ -0.34
PNKP-223ENST00000629179 DSN1Q9H410 356 aa12.92□□□□□ -0.34
PNKP-223ENST00000629179 CHST11Q9NPF2 352 aa12.92□□□□□ -0.34
PNKP-223ENST00000629179 FBXO34Q9NWN3 711 aa12.92□□□□□ -0.34
PNKP-223ENST00000629179 MED11Q9P086 117 aa12.92□□□□□ -0.34
PNKP-223ENST00000629179 PPP4R1LQ9P1A2 415 aa12.92□□□□□ -0.34
PNKP-223ENST00000629179 MARCOQ9UEW3 520 aaPredicted RBP12.92□□□□□ -0.34
PNKP-223ENST00000629179 CAMK2AQ9UQM7 478 aa12.92□□□□□ -0.34
PNKP-223ENST00000629179 PCDHGB3Q9Y5G1 929 aa12.92□□□□□ -0.34
PNKP-223ENST00000629179 CREBBPQ92793 2442 aa12.91□□□□□ -0.34
PNKP-223ENST00000629179 A0A0G2JNJ9 132 aa12.91□□□□□ -0.34
PNKP-223ENST00000629179 GOLGA8QA0A0J9YX86 632 aa12.91□□□□□ -0.34
PNKP-223ENST00000629179 GOLGA8OA6NCC3 632 aa12.91□□□□□ -0.34
PNKP-223ENST00000629179 NKX2-6A6NCS4 301 aa12.91□□□□□ -0.34
PNKP-223ENST00000629179 FAM90A27PA6NNH2 459 aa12.91□□□□□ -0.34
PNKP-223ENST00000629179 AHRRA9YTQ3 701 aa12.91□□□□□ -0.34
PNKP-223ENST00000629179 GOLGA8NF8WBI6 632 aa12.91□□□□□ -0.34
PNKP-223ENST00000629179 HNRNPRO43390 633 aaKnown RBP12.91□□□□□ -0.34
PNKP-223ENST00000629179 ZIC3O60481 467 aa12.91□□□□□ -0.34
PNKP-223ENST00000629179 KCNK2O95069 426 aa12.91□□□□□ -0.34
PNKP-223ENST00000629179 DPP4P27487 766 aa12.91□□□□□ -0.34
PNKP-223ENST00000629179 CHRNB4P30926 498 aa12.91□□□□□ -0.34
PNKP-223ENST00000629179 SRD5A2P31213 254 aa12.91□□□□□ -0.34
PNKP-223ENST00000629179 ADH7P40394 386 aa12.91□□□□□ -0.34
PNKP-223ENST00000629179 KIR3DL1P43629 444 aa12.91□□□□□ -0.34
PNKP-223ENST00000629179 PRIM2P49643 509 aa12.91□□□□□ -0.34
PNKP-223ENST00000629179 WNT3P56703 355 aa12.91□□□□□ -0.34
PNKP-223ENST00000629179 HBA1P69905 142 aa12.91□□□□□ -0.34
PNKP-223ENST00000629179 OCRLQ01968 901 aa12.91□□□□□ -0.34
PNKP-223ENST00000629179 TP53BP2Q13625 1128 aa12.91□□□□□ -0.34
PNKP-223ENST00000629179 LASP1Q14847 261 aaKnown RBP12.91□□□□□ -0.34
PNKP-223ENST00000629179 SPDYE7PQ495Y7 208 aa12.91□□□□□ -0.34
PNKP-223ENST00000629179 ZCCHC12Q6PEW1 402 aa12.91□□□□□ -0.34
PNKP-223ENST00000629179 FIGNL1Q6PIW4 674 aa12.91□□□□□ -0.34
PNKP-223ENST00000629179 APOOLQ6UXV4 268 aa12.91□□□□□ -0.34
PNKP-223ENST00000629179 SEM1Q6ZVN7 128 aa12.91□□□□□ -0.34
PNKP-223ENST00000629179 CAMKMTQ7Z624 323 aa12.91□□□□□ -0.34
PNKP-223ENST00000629179 ZAR1Q86SH2 424 aa12.91□□□□□ -0.34
PNKP-223ENST00000629179 WDR75Q8IWA0 830 aaKnown RBP12.91□□□□□ -0.34
PNKP-223ENST00000629179 TRIM42Q8IWZ5 723 aa12.91□□□□□ -0.34
PNKP-223ENST00000629179 CLECL1Q8IZS7 167 aa12.91□□□□□ -0.34
PNKP-223ENST00000629179 OR4K17Q8NGC6 315 aa12.91□□□□□ -0.34
PNKP-223ENST00000629179 OR5AK3PQ8NH89 298 aa12.91□□□□□ -0.34
PNKP-223ENST00000629179 LILRB4Q8NHJ6 448 aa12.91□□□□□ -0.34
PNKP-223ENST00000629179 FAM110BQ8TC76 370 aa12.91□□□□□ -0.34
PNKP-223ENST00000629179 DUSP19Q8WTR2 217 aa12.91□□□□□ -0.34
PNKP-223ENST00000629179 MARVELD3Q96A59 401 aa12.91□□□□□ -0.34
PNKP-223ENST00000629179 CHMP6Q96FZ7 201 aa12.91□□□□□ -0.34
PNKP-223ENST00000629179 WDYHV1Q96HA8 205 aa12.91□□□□□ -0.34
PNKP-223ENST00000629179 PRDM14Q9GZV8 571 aa12.91□□□□□ -0.34
PNKP-223ENST00000629179 WDR55Q9H6Y2 383 aaPredicted RBP12.91□□□□□ -0.34
PNKP-223ENST00000629179 FAM120CQ9NX05 1096 aaKnown RBP12.91□□□□□ -0.34
PNKP-223ENST00000629179 TAS2R10Q9NYW0 307 aa12.91□□□□□ -0.34
PNKP-223ENST00000629179 Q9UFV3 132 aa12.91□□□□□ -0.34
PNKP-223ENST00000629179 DKKL1Q9UK85 242 aa12.91□□□□□ -0.34
PNKP-223ENST00000629179 ABCG2Q9UNQ0 655 aa12.91□□□□□ -0.34
PNKP-223ENST00000629179 TEX15Q9BXT5 2789 aa12.91□□□□□ -0.34
PNKP-223ENST00000629179 ANKRD28O15084 1053 aa12.9□□□□□ -0.34
PNKP-223ENST00000629179 HDAC3O15379 428 aa12.9□□□□□ -0.34
PNKP-223ENST00000629179 EPPINO95925 133 aa12.9□□□□□ -0.34
PNKP-223ENST00000629179 ALDOCP09972 364 aaKnown RBP12.9□□□□□ -0.34
PNKP-223ENST00000629179 EPHA3P29320 983 aa12.9□□□□□ -0.34
PNKP-223ENST00000629179 STARP49675 285 aa12.9□□□□□ -0.34
PNKP-223ENST00000629179 CLK3P49761 638 aaKnown RBP12.9□□□□□ -0.34
PNKP-223ENST00000629179 NME5P56597 212 aa12.9□□□□□ -0.34
PNKP-223ENST00000629179 PHC1P78364 1004 aa12.9□□□□□ -0.34
PNKP-223ENST00000629179 ACSF3Q4G176 576 aaPredicted RBP12.9□□□□□ -0.34
PNKP-223ENST00000629179 TTMPQ5BVD1 217 aa12.9□□□□□ -0.34
PNKP-223ENST00000629179 CCNJQ5T5M9 372 aa12.9□□□□□ -0.34
PNKP-223ENST00000629179 OGFOD2Q6N063 350 aa12.9□□□□□ -0.34
PNKP-223ENST00000629179 IFNEQ86WN2 208 aa12.9□□□□□ -0.34
PNKP-223ENST00000629179 PM20D2Q8IYS1 436 aa12.9□□□□□ -0.34
PNKP-223ENST00000629179 COX18Q8N8Q8 333 aa12.9□□□□□ -0.34
PNKP-223ENST00000629179 FADS6Q8N9I5 356 aa12.9□□□□□ -0.34
PNKP-223ENST00000629179 OR2M3Q8NG83 312 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms