RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 CLCA1A8K7I4 914 aa9.82□□□□□ -0.84
SSBP4-215ENST00000625926 C17orf51A8MQB3 221 aa9.82□□□□□ -0.84
SSBP4-215ENST00000625926 LINC01387J3KSC0 135 aa9.82□□□□□ -0.84
SSBP4-215ENST00000625926 CTIFO43310 598 aaKnown RBP9.82□□□□□ -0.84
SSBP4-215ENST00000625926 EMC8O43402 210 aa9.82□□□□□ -0.84
SSBP4-215ENST00000625926 ZNF500O60304 480 aaPredicted RBP9.82□□□□□ -0.84
SSBP4-215ENST00000625926 NKX2-2O95096 273 aa9.82□□□□□ -0.84
SSBP4-215ENST00000625926 RCBTB2O95199 551 aa9.82□□□□□ -0.84
SSBP4-215ENST00000625926 UTS2O95399 124 aa9.82□□□□□ -0.84
SSBP4-215ENST00000625926 TMIGD3P0DMS9 266 aaPredicted RBP9.82□□□□□ -0.84
SSBP4-215ENST00000625926 ZNF708P17019 499 aa9.82□□□□□ -0.84
SSBP4-215ENST00000625926 HK1P19367 917 aa9.82□□□□□ -0.84
SSBP4-215ENST00000625926 TCEA1P23193 301 aaKnown RBP9.82□□□□□ -0.84
SSBP4-215ENST00000625926 HPCAL1P37235 193 aa9.82□□□□□ -0.84
SSBP4-215ENST00000625926 MAP3K8P41279 467 aa9.82□□□□□ -0.84
SSBP4-215ENST00000625926 ETV4P43268 484 aa9.82□□□□□ -0.84
SSBP4-215ENST00000625926 AGFG1P52594 562 aaKnown RBP9.82□□□□□ -0.84
SSBP4-215ENST00000625926 CLDN18P56856 261 aa9.82□□□□□ -0.84
SSBP4-215ENST00000625926 EEF1A1P68104 462 aaKnown RBP9.82□□□□□ -0.84
SSBP4-215ENST00000625926 C17orf67Q0P5P2 114 aa9.82□□□□□ -0.84
SSBP4-215ENST00000625926 STX5Q13190 355 aa9.82□□□□□ -0.84
SSBP4-215ENST00000625926 SNTB1Q13884 538 aaKnown RBP9.82□□□□□ -0.84
SSBP4-215ENST00000625926 MLC1Q15049 377 aa9.82□□□□□ -0.84
SSBP4-215ENST00000625926 KRT71Q3SY84 523 aa9.82□□□□□ -0.84
SSBP4-215ENST00000625926 ATP6AP1LQ52LC2 224 aa9.82□□□□□ -0.84
SSBP4-215ENST00000625926 XKR7Q5GH72 579 aa9.82□□□□□ -0.84
SSBP4-215ENST00000625926 EEF1A1P5Q5VTE0 462 aa9.82□□□□□ -0.84
SSBP4-215ENST00000625926 ZCCHC12Q6PEW1 402 aa9.82□□□□□ -0.84
SSBP4-215ENST00000625926 CHMP1BQ7LBR1 199 aa9.82□□□□□ -0.84
SSBP4-215ENST00000625926 SZRD1Q7Z422 152 aa9.82□□□□□ -0.84
SSBP4-215ENST00000625926 ADGRE4PQ86SQ3 457 aa9.82□□□□□ -0.84
SSBP4-215ENST00000625926 MARCH3Q86UD3 253 aa9.82□□□□□ -0.84
SSBP4-215ENST00000625926 EXOC3L1Q86VI1 746 aa9.82□□□□□ -0.84
SSBP4-215ENST00000625926 NUDCD3Q8IVD9 361 aa9.82□□□□□ -0.84
SSBP4-215ENST00000625926 ZZZ3Q8IYH5 903 aa9.82□□□□□ -0.84
SSBP4-215ENST00000625926 C9orf106Q8NAJ2 232 aa9.82□□□□□ -0.84
SSBP4-215ENST00000625926 OR2M3Q8NG83 312 aa9.82□□□□□ -0.84
SSBP4-215ENST00000625926 OR6Y1Q8NGX8 325 aa9.82□□□□□ -0.84
SSBP4-215ENST00000625926 PPP1R14CQ8TAE6 165 aa9.82□□□□□ -0.84
SSBP4-215ENST00000625926 SLC9A6Q92581 669 aa9.82□□□□□ -0.84
SSBP4-215ENST00000625926 HOXB13Q92826 284 aaPredicted RBP9.82□□□□□ -0.84
SSBP4-215ENST00000625926 RMND5BQ96G75 393 aaPredicted RBP9.82□□□□□ -0.84
SSBP4-215ENST00000625926 G6PC3Q9BUM1 346 aa9.82□□□□□ -0.84
SSBP4-215ENST00000625926 TBL1XR1Q9BZK7 514 aa9.82□□□□□ -0.84
SSBP4-215ENST00000625926 ACBD3Q9H3P7 528 aa9.82□□□□□ -0.84
SSBP4-215ENST00000625926 HHATLQ9HCP6 504 aa9.82□□□□□ -0.84
SSBP4-215ENST00000625926 FLRT3Q9NZU0 649 aa9.82□□□□□ -0.84
SSBP4-215ENST00000625926 ATP6V1HQ9UI12 483 aa9.82□□□□□ -0.84
SSBP4-215ENST00000625926 ZDHHC2Q9UIJ5 367 aa9.82□□□□□ -0.84
SSBP4-215ENST00000625926 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.81□□□□□ -0.84
SSBP4-215ENST00000625926 A0A1W2PRB8 838 aa9.81□□□□□ -0.84
SSBP4-215ENST00000625926 B4DXG7 233 aa9.81□□□□□ -0.84
SSBP4-215ENST00000625926 SCAMP2O15127 329 aaKnown RBP9.81□□□□□ -0.84
SSBP4-215ENST00000625926 RGS16O15492 202 aaPredicted RBP9.81□□□□□ -0.84
SSBP4-215ENST00000625926 LYPLA1O75608 230 aaPredicted RBP9.81□□□□□ -0.84
SSBP4-215ENST00000625926 ANGPTL1O95841 491 aa9.81□□□□□ -0.84
SSBP4-215ENST00000625926 IGKV1D-16P01601 117 aa9.81□□□□□ -0.84
SSBP4-215ENST00000625926 ALOX5P09917 674 aa9.81□□□□□ -0.84
SSBP4-215ENST00000625926 PEPDP12955 493 aa9.81□□□□□ -0.84
SSBP4-215ENST00000625926 ARRB2P32121 409 aa9.81□□□□□ -0.84
SSBP4-215ENST00000625926 SERPINB4P48594 390 aa9.81□□□□□ -0.84
SSBP4-215ENST00000625926 EEFSECP57772 596 aaKnown RBP9.81□□□□□ -0.84
SSBP4-215ENST00000625926 B3GALT5-AS1P59052 145 aa9.81□□□□□ -0.84
SSBP4-215ENST00000625926 PRR5P85299 388 aa9.81□□□□□ -0.84
SSBP4-215ENST00000625926 ZNF844Q08AG5 666 aa9.81□□□□□ -0.84
SSBP4-215ENST00000625926 GANABQ14697 944 aaKnown RBP9.81□□□□□ -0.84
SSBP4-215ENST00000625926 GRAMD1BQ3KR37 738 aa9.81□□□□□ -0.84
SSBP4-215ENST00000625926 GLYR1Q49A26 553 aaPredicted RBP9.81□□□□□ -0.84
SSBP4-215ENST00000625926 C6orf136Q5SQH8 315 aa9.81□□□□□ -0.84
SSBP4-215ENST00000625926 CPTPQ5TA50 214 aa9.81□□□□□ -0.84
SSBP4-215ENST00000625926 IL23RQ5VWK5 629 aa9.81□□□□□ -0.84
SSBP4-215ENST00000625926 RAET1LQ5VY80 246 aa9.81□□□□□ -0.84
SSBP4-215ENST00000625926 MFSD12Q6NUT3 480 aa9.81□□□□□ -0.84
SSBP4-215ENST00000625926 KIF18BQ86Y91 864 aa9.81□□□□□ -0.84
SSBP4-215ENST00000625926 GRAMD2AQ8IUY3 354 aa9.81□□□□□ -0.84
SSBP4-215ENST00000625926 MEIOBQ8N635 442 aa9.81□□□□□ -0.84
SSBP4-215ENST00000625926 NATD1Q8N6N6 113 aa9.81□□□□□ -0.84
SSBP4-215ENST00000625926 FNDC5Q8NAU1 212 aa9.81□□□□□ -0.84
SSBP4-215ENST00000625926 SLC16A11Q8NCK7 471 aa9.81□□□□□ -0.84
SSBP4-215ENST00000625926 GOT1L1Q8NHS2 421 aaPredicted RBP9.81□□□□□ -0.84
SSBP4-215ENST00000625926 FAM222BQ8WU58 562 aa9.81□□□□□ -0.84
SSBP4-215ENST00000625926 INTS12Q96CB8 462 aaKnown RBP9.81□□□□□ -0.84
SSBP4-215ENST00000625926 GIMAP5Q96F15 307 aa9.81□□□□□ -0.84
SSBP4-215ENST00000625926 C16orf58Q96GQ5 468 aa9.81□□□□□ -0.84
SSBP4-215ENST00000625926 C3orf30Q96M34 536 aa9.81□□□□□ -0.84
SSBP4-215ENST00000625926 MS4A4EQ96PG1 132 aa9.81□□□□□ -0.84
SSBP4-215ENST00000625926 PRPF18Q99633 342 aaKnown RBP9.81□□□□□ -0.84
SSBP4-215ENST00000625926 PIGQQ9BRB3 760 aa9.81□□□□□ -0.84
SSBP4-215ENST00000625926 SFXN3Q9BWM7 321 aa9.81□□□□□ -0.84
SSBP4-215ENST00000625926 RTN4RQ9BZR6 473 aa9.81□□□□□ -0.84
SSBP4-215ENST00000625926 SSU72Q9NP77 194 aaKnown RBP9.81□□□□□ -0.84
SSBP4-215ENST00000625926 ATAD3AQ9NVI7 634 aa9.81□□□□□ -0.84
SSBP4-215ENST00000625926 CRIM1Q9NZV1 1036 aa9.81□□□□□ -0.84
SSBP4-215ENST00000625926 JKAMPQ9P055 326 aa9.81□□□□□ -0.84
SSBP4-215ENST00000625926 CLCF1Q9UBD9 225 aa9.81□□□□□ -0.84
SSBP4-215ENST00000625926 GIMAP2Q9UG22 337 aa9.81□□□□□ -0.84
SSBP4-215ENST00000625926 EIF3LQ9Y262 564 aaKnown RBP9.81□□□□□ -0.84
SSBP4-215ENST00000625926 NCOA6Q14686 2063 aaPredicted RBP9.81□□□□□ -0.84
SSBP4-215ENST00000625926 IGLV3-32A0A0A0MS00 114 aa9.8□□□□□ -0.84
SSBP4-215ENST00000625926 WDR91A4D1P6 747 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms