RNA–Protein interactions for RNA: ENST00000625245.2

SMN1-211, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN1, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-211ENST00000625245 PON3Q15166 354 aa17.08■□□□□ 0.32
SMN1-211ENST00000625245 SGCBQ16585 318 aa17.08■□□□□ 0.32
SMN1-211ENST00000625245 DECR1Q16698 335 aa17.08■□□□□ 0.32
SMN1-211ENST00000625245 PRSS53Q2L4Q9 553 aa17.08■□□□□ 0.32
SMN1-211ENST00000625245 EXOC3L2Q2M3D2 409 aa17.08■□□□□ 0.32
SMN1-211ENST00000625245 CYP27C1Q4G0S4 372 aa17.08■□□□□ 0.32
SMN1-211ENST00000625245 TMEM107Q6UX40 140 aa17.08■□□□□ 0.32
SMN1-211ENST00000625245 MARCH3Q86UD3 253 aa17.08■□□□□ 0.32
SMN1-211ENST00000625245 HS3ST6Q96QI5 342 aa17.08■□□□□ 0.32
SMN1-211ENST00000625245 KCNA7Q96RP8 456 aa17.08■□□□□ 0.32
SMN1-211ENST00000625245 PIGQQ9BRB3 760 aa17.08■□□□□ 0.32
SMN1-211ENST00000625245 RTN4RQ9BZR6 473 aa17.08■□□□□ 0.32
SMN1-211ENST00000625245 ZNF175Q9Y473 711 aa17.08■□□□□ 0.32
SMN1-211ENST00000625245 A0A087WUV0 522 aaPredicted RBP17.07■□□□□ 0.32
SMN1-211ENST00000625245 TRIM64A6NGJ6 449 aa17.07■□□□□ 0.32
SMN1-211ENST00000625245 TRIM64BA6NI03 449 aa17.07■□□□□ 0.32
SMN1-211ENST00000625245 MYO1GB0I1T2 1018 aa17.07■□□□□ 0.32
SMN1-211ENST00000625245 LINC01387J3KSC0 135 aa17.07■□□□□ 0.32
SMN1-211ENST00000625245 CGAP01215 116 aa17.07■□□□□ 0.32
SMN1-211ENST00000625245 IMPDH1P20839 514 aa17.07■□□□□ 0.32
SMN1-211ENST00000625245 TBXA2RP21731 343 aa17.07■□□□□ 0.32
SMN1-211ENST00000625245 CCKARP32238 428 aa17.07■□□□□ 0.32
SMN1-211ENST00000625245 LGSNQ5TDP6 509 aa17.07■□□□□ 0.32
SMN1-211ENST00000625245 PRSS57Q6UWY2 283 aa17.07■□□□□ 0.32
SMN1-211ENST00000625245 C20orf204Q6ZNR8 217 aa17.07■□□□□ 0.32
SMN1-211ENST00000625245 C1GALT1C1Q96EU7 318 aa17.07■□□□□ 0.32
SMN1-211ENST00000625245 PRRG4Q9BZD6 226 aa17.07■□□□□ 0.32
SMN1-211ENST00000625245 RNF122Q9H9V4 155 aa17.07■□□□□ 0.32
SMN1-211ENST00000625245 MIEF1Q9NQG6 463 aa17.07■□□□□ 0.32
SMN1-211ENST00000625245 ABCG2Q9UNQ0 655 aa17.07■□□□□ 0.32
SMN1-211ENST00000625245 TLN2Q9Y4G6 2542 aa17.07■□□□□ 0.32
SMN1-211ENST00000625245 A0A087WV62 115 aa17.06■□□□□ 0.32
SMN1-211ENST00000625245 EXOC1LA0A1B0GW35 172 aa17.06■□□□□ 0.32
SMN1-211ENST00000625245 CCDC151A5D8V7 595 aa17.06■□□□□ 0.32
SMN1-211ENST00000625245 ENO1P06733 434 aaKnown RBP17.06■□□□□ 0.32
SMN1-211ENST00000625245 CD8BP10966 210 aa17.06■□□□□ 0.32
SMN1-211ENST00000625245 DDCP20711 480 aa17.06■□□□□ 0.32
SMN1-211ENST00000625245 ATP5F1P24539 256 aaPredicted RBP17.06■□□□□ 0.32
SMN1-211ENST00000625245 LCP2Q13094 533 aa17.06■□□□□ 0.32
SMN1-211ENST00000625245 FGFBP1Q14512 234 aa17.06■□□□□ 0.32
SMN1-211ENST00000625245 ZNHIT3Q15649 155 aaPredicted RBP17.06■□□□□ 0.32
SMN1-211ENST00000625245 GALNT18Q6P9A2 607 aa17.06■□□□□ 0.32
SMN1-211ENST00000625245 C22orf34Q6ZV56 151 aa17.06■□□□□ 0.32
SMN1-211ENST00000625245 Q9N2J8 555 aa17.06■□□□□ 0.32
SMN1-211ENST00000625245 DDX18Q9NVP1 670 aaKnown RBP17.06■□□□□ 0.32
SMN1-211ENST00000625245 FAM120CQ9NX05 1096 aaKnown RBP17.06■□□□□ 0.32
SMN1-211ENST00000625245 MRTO4Q9UKD2 239 aaKnown RBP17.06■□□□□ 0.32
SMN1-211ENST00000625245 C19orf53Q9UNZ5 99 aaPredicted RBP17.06■□□□□ 0.32
SMN1-211ENST00000625245 STK38LQ9Y2H1 464 aa17.06■□□□□ 0.32
SMN1-211ENST00000625245 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.06■□□□□ 0.32
SMN1-211ENST00000625245 CSPG4Q6UVK1 2322 aa17.05■□□□□ 0.32
SMN1-211ENST00000625245 SHISA8B8ZZ34 492 aa17.05■□□□□ 0.32
SMN1-211ENST00000625245 URI1O94763 535 aaPredicted RBP17.05■□□□□ 0.32
SMN1-211ENST00000625245 IL33O95760 270 aa17.05■□□□□ 0.32
SMN1-211ENST00000625245 NTSP30990 170 aa17.05■□□□□ 0.32
SMN1-211ENST00000625245 GSTM5P46439 218 aa17.05■□□□□ 0.32
SMN1-211ENST00000625245 PRKAA2P54646 552 aa17.05■□□□□ 0.32
SMN1-211ENST00000625245 PKNOX1P55347 436 aa17.05■□□□□ 0.32
SMN1-211ENST00000625245 ZNF763Q0D2J5 394 aa17.05■□□□□ 0.32
SMN1-211ENST00000625245 IMPG1Q17R60 797 aa17.05■□□□□ 0.32
SMN1-211ENST00000625245 SLC22A9Q8IVM8 553 aa17.05■□□□□ 0.32
SMN1-211ENST00000625245 GFM2Q969S9 779 aaKnown RBP17.05■□□□□ 0.32
SMN1-211ENST00000625245 TBL1XR1Q9BZK7 514 aa17.05■□□□□ 0.32
SMN1-211ENST00000625245 SHCBP1LQ9BZQ2 653 aa17.05■□□□□ 0.32
SMN1-211ENST00000625245 GLIPR2Q9H4G4 154 aa17.05■□□□□ 0.32
SMN1-211ENST00000625245 RAI1Q7Z5J4 1906 aaPredicted RBP17.05■□□□□ 0.32
SMN1-211ENST00000625245 UPK1AO00322 258 aa17.04■□□□□ 0.32
SMN1-211ENST00000625245 AQP8O94778 261 aa17.04■□□□□ 0.32
SMN1-211ENST00000625245 GABRA3P34903 492 aa17.04■□□□□ 0.32
SMN1-211ENST00000625245 EIF1AXP47813 144 aaKnown RBP17.04■□□□□ 0.32
SMN1-211ENST00000625245 PSMD4P55036 377 aaKnown RBP17.04■□□□□ 0.32
SMN1-211ENST00000625245 GLYR1Q49A26 553 aaPredicted RBP17.04■□□□□ 0.32
SMN1-211ENST00000625245 PLEKHM3Q6ZWE6 761 aa17.04■□□□□ 0.32
SMN1-211ENST00000625245 FAM214BQ7L5A3 538 aa17.04■□□□□ 0.32
SMN1-211ENST00000625245 PRIMA1Q86XR5 153 aa17.04■□□□□ 0.32
SMN1-211ENST00000625245 CCNYL1Q8N7R7 359 aa17.04■□□□□ 0.32
SMN1-211ENST00000625245 PPP1R14CQ8TAE6 165 aa17.04■□□□□ 0.32
SMN1-211ENST00000625245 C11orf24Q96F05 449 aaPredicted RBP17.04■□□□□ 0.32
SMN1-211ENST00000625245 MARK4Q96L34 752 aa17.04■□□□□ 0.32
SMN1-211ENST00000625245 MID1IP1Q9NPA3 183 aa17.04■□□□□ 0.32
SMN1-211ENST00000625245 SIRT5Q9NXA8 310 aa17.04■□□□□ 0.32
SMN1-211ENST00000625245 GRID1Q9ULK0 1009 aa17.04■□□□□ 0.32
SMN1-211ENST00000625245 CLEC4AQ9UMR7 237 aa17.04■□□□□ 0.32
SMN1-211ENST00000625245 VDAC3Q9Y277 283 aa17.04■□□□□ 0.32
SMN1-211ENST00000625245 POLR3HQ9Y535 204 aaPredicted RBP17.04■□□□□ 0.32
SMN1-211ENST00000625245 AP4B1Q9Y6B7 739 aa17.04■□□□□ 0.32
SMN1-211ENST00000625245 USF3Q68DE3 2245 aa17.04■□□□□ 0.32
SMN1-211ENST00000625245 HIVEP2P31629 2446 aa17.04■□□□□ 0.32
SMN1-211ENST00000625245 GOLGA8RI6L899 631 aa17.03■□□□□ 0.32
SMN1-211ENST00000625245 EIF1AYO14602 144 aaKnown RBP17.03■□□□□ 0.32
SMN1-211ENST00000625245 SLITRK5O94991 958 aa17.03■□□□□ 0.32
SMN1-211ENST00000625245 UTS2O95399 124 aa17.03■□□□□ 0.32
SMN1-211ENST00000625245 ANGPTL1O95841 491 aa17.03■□□□□ 0.32
SMN1-211ENST00000625245 PLGP00747 810 aaPredicted RBP17.03■□□□□ 0.32
SMN1-211ENST00000625245 FCGR2AP12318 317 aa17.03■□□□□ 0.32
SMN1-211ENST00000625245 LOXP28300 417 aaPredicted RBP17.03■□□□□ 0.32
SMN1-211ENST00000625245 C17orf67Q0P5P2 114 aa17.03■□□□□ 0.32
SMN1-211ENST00000625245 FAM71E1Q6IPT2 247 aa17.03■□□□□ 0.32
SMN1-211ENST00000625245 TIFABQ6ZNK6 161 aa17.03■□□□□ 0.32
SMN1-211ENST00000625245 MMGT1Q8N4V1 131 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms