RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 STX19Q8N4C7 294 aa11.71□□□□□ -0.53
LITAF-221ENST00000622633 OR4C15Q8NGM1 316 aa11.71□□□□□ -0.53
LITAF-221ENST00000622633 OR56A3Q8NH54 315 aa11.71□□□□□ -0.53
LITAF-221ENST00000622633 CYB5D2Q8WUJ1 264 aa11.71□□□□□ -0.53
LITAF-221ENST00000622633 TCF25Q9BQ70 676 aa11.71□□□□□ -0.53
LITAF-221ENST00000622633 SLC35A5Q9BS91 424 aa11.71□□□□□ -0.53
LITAF-221ENST00000622633 C14orf105Q9NVL8 296 aa11.71□□□□□ -0.53
LITAF-221ENST00000622633 SPASTQ9UBP0 616 aa11.71□□□□□ -0.53
LITAF-221ENST00000622633 GHRLQ9UBU3 117 aa11.71□□□□□ -0.53
LITAF-221ENST00000622633 ZNF282Q9UDV7 671 aaPredicted RBP11.71□□□□□ -0.53
LITAF-221ENST00000622633 SSR3Q9UNL2 185 aa11.71□□□□□ -0.53
LITAF-221ENST00000622633 SH2B3Q9UQQ2 575 aa11.71□□□□□ -0.53
LITAF-221ENST00000622633 KLK4Q9Y5K2 254 aa11.71□□□□□ -0.53
LITAF-221ENST00000622633 CLCA1A8K7I4 914 aa11.71□□□□□ -0.53
LITAF-221ENST00000622633 INMT-MINDY4F8WBC2 141 aa11.71□□□□□ -0.53
LITAF-221ENST00000622633 M0R233 179 aa11.71□□□□□ -0.53
LITAF-221ENST00000622633 GTPBP1O00178 669 aaKnown RBP11.71□□□□□ -0.53
LITAF-221ENST00000622633 RNASET2O00584 256 aaKnown RBP11.71□□□□□ -0.53
LITAF-221ENST00000622633 ADAMDEC1O15204 470 aa11.71□□□□□ -0.53
LITAF-221ENST00000622633 TGFB1P01137 390 aa11.71□□□□□ -0.53
LITAF-221ENST00000622633 LRG1P02750 347 aa11.71□□□□□ -0.53
LITAF-221ENST00000622633 ATP5A1P25705 553 aaKnown RBP11.71□□□□□ -0.53
LITAF-221ENST00000622633 RPS19P39019 145 aaKnown RBP11.71□□□□□ -0.53
LITAF-221ENST00000622633 MAN2A2P49641 1150 aa11.71□□□□□ -0.53
LITAF-221ENST00000622633 SMAD4Q13485 552 aaKnown RBP11.71□□□□□ -0.53
LITAF-221ENST00000622633 SCARB2Q14108 478 aa11.71□□□□□ -0.53
LITAF-221ENST00000622633 IRF4Q15306 451 aa11.71□□□□□ -0.53
LITAF-221ENST00000622633 IFI44LQ53G44 452 aa11.71□□□□□ -0.53
LITAF-221ENST00000622633 GCNT6Q5T4J0 391 aa11.71□□□□□ -0.53
LITAF-221ENST00000622633 HENMT1Q5T8I9 393 aaKnown RBP11.71□□□□□ -0.53
LITAF-221ENST00000622633 MED27Q6P2C8 311 aa11.71□□□□□ -0.53
LITAF-221ENST00000622633 TMEM220Q6QAJ8 160 aa11.71□□□□□ -0.53
LITAF-221ENST00000622633 SLCO4C1Q6ZQN7 724 aa11.71□□□□□ -0.53
LITAF-221ENST00000622633 DDX53Q86TM3 631 aaKnown RBP11.71□□□□□ -0.53
LITAF-221ENST00000622633 TRAM1L1Q8N609 369 aa11.71□□□□□ -0.53
LITAF-221ENST00000622633 OR9Q2Q8NGE9 314 aa11.71□□□□□ -0.53
LITAF-221ENST00000622633 OR5AK3PQ8NH89 298 aa11.71□□□□□ -0.53
LITAF-221ENST00000622633 C14orf144Q96I85 54 aa11.71□□□□□ -0.53
LITAF-221ENST00000622633 COL21A1Q96P44 957 aa11.71□□□□□ -0.53
LITAF-221ENST00000622633 SARGQ9BW04 601 aa11.71□□□□□ -0.53
LITAF-221ENST00000622633 REEP4Q9H6H4 257 aa11.71□□□□□ -0.53
LITAF-221ENST00000622633 C11orf49Q9H6J7 331 aa11.71□□□□□ -0.53
LITAF-221ENST00000622633 PLCXD1Q9NUJ7 323 aa11.71□□□□□ -0.53
LITAF-221ENST00000622633 ZNF222Q9UK12 451 aa11.71□□□□□ -0.53
LITAF-221ENST00000622633 MAP4K5Q9Y4K4 846 aa11.71□□□□□ -0.53
LITAF-221ENST00000622633 DMRT1Q9Y5R6 373 aa11.71□□□□□ -0.53
LITAF-221ENST00000622633 TRBV23OR9-2A0A075B6M9 112 aa11.7□□□□□ -0.54
LITAF-221ENST00000622633 SLC5A10A0PJK1 596 aa11.7□□□□□ -0.54
LITAF-221ENST00000622633 PRKAR1AP10644 381 aa11.7□□□□□ -0.54
LITAF-221ENST00000622633 PAICSP22234 425 aaKnown RBP11.7□□□□□ -0.54
LITAF-221ENST00000622633 SSTR4P31391 388 aa11.7□□□□□ -0.54
LITAF-221ENST00000622633 SNRPEP62304 92 aaKnown RBP11.7□□□□□ -0.54
LITAF-221ENST00000622633 CAMK2DQ13557 499 aa11.7□□□□□ -0.54
LITAF-221ENST00000622633 KCNAB1Q14722 419 aa11.7□□□□□ -0.54
LITAF-221ENST00000622633 KLHL22Q53GT1 634 aa11.7□□□□□ -0.54
LITAF-221ENST00000622633 AADACL4Q5VUY2 407 aa11.7□□□□□ -0.54
LITAF-221ENST00000622633 ZNF605Q86T29 641 aa11.7□□□□□ -0.54
LITAF-221ENST00000622633 ADIPOR2Q86V24 386 aa11.7□□□□□ -0.54
LITAF-221ENST00000622633 ZFP82Q8N141 532 aa11.7□□□□□ -0.54
LITAF-221ENST00000622633 AVL9Q8NBF6 648 aa11.7□□□□□ -0.54
LITAF-221ENST00000622633 ZNF675Q8TD23 568 aa11.7□□□□□ -0.54
LITAF-221ENST00000622633 SLC38A2Q96QD8 506 aa11.7□□□□□ -0.54
LITAF-221ENST00000622633 LINC00597Q9H2U6 94 aa11.7□□□□□ -0.54
LITAF-221ENST00000622633 NDRG2Q9UN36 371 aaKnown RBP11.7□□□□□ -0.54
LITAF-221ENST00000622633 LOC102723532A0A0G2JNH3 316 aa11.7□□□□□ -0.54
LITAF-221ENST00000622633 PTHP01270 115 aa11.7□□□□□ -0.54
LITAF-221ENST00000622633 NNMTP40261 264 aa11.7□□□□□ -0.54
LITAF-221ENST00000622633 CCR2P41597 374 aa11.7□□□□□ -0.54
LITAF-221ENST00000622633 GPR143P51810 404 aa11.7□□□□□ -0.54
LITAF-221ENST00000622633 TMEM115Q12893 351 aaPredicted RBP11.7□□□□□ -0.54
LITAF-221ENST00000622633 PRSS53Q2L4Q9 553 aa11.7□□□□□ -0.54
LITAF-221ENST00000622633 TMEM215Q68D42 235 aa11.7□□□□□ -0.54
LITAF-221ENST00000622633 COMMD6Q7Z4G1 85 aa11.7□□□□□ -0.54
LITAF-221ENST00000622633 POF1BQ8WVV4 589 aa11.7□□□□□ -0.54
LITAF-221ENST00000622633 HGDQ93099 445 aa11.7□□□□□ -0.54
LITAF-221ENST00000622633 GTPBP3Q969Y2 492 aaKnown RBP11.7□□□□□ -0.54
LITAF-221ENST00000622633 LURAP1Q96LR2 239 aa11.7□□□□□ -0.54
LITAF-221ENST00000622633 SFXN2Q96NB2 322 aa11.7□□□□□ -0.54
LITAF-221ENST00000622633 CCM2Q9BSQ5 444 aa11.7□□□□□ -0.54
LITAF-221ENST00000622633 BHLHE41Q9C0J9 482 aaPredicted RBP11.7□□□□□ -0.54
LITAF-221ENST00000622633 MED28Q9H204 178 aa11.7□□□□□ -0.54
LITAF-221ENST00000622633 MIXL1Q9H2W2 232 aa11.7□□□□□ -0.54
LITAF-221ENST00000622633 HCFC1R1Q9NWW0 138 aa11.7□□□□□ -0.54
LITAF-221ENST00000622633 TAS2R16Q9NYV7 291 aa11.7□□□□□ -0.54
LITAF-221ENST00000622633 PPIEQ9UNP9 301 aaKnown RBP11.7□□□□□ -0.54
LITAF-221ENST00000622633 CMAHPQ9Y471 501 aa11.7□□□□□ -0.54
LITAF-221ENST00000622633 RNF215Q9Y6U7 377 aa11.7□□□□□ -0.54
LITAF-221ENST00000622633 FABP12A6NFH5 140 aa11.69□□□□□ -0.54
LITAF-221ENST00000622633 CCL16O15467 120 aa11.69□□□□□ -0.54
LITAF-221ENST00000622633 CDC123O75794 336 aaPredicted RBP11.69□□□□□ -0.54
LITAF-221ENST00000622633 RGS11O94810 467 aa11.69□□□□□ -0.54
LITAF-221ENST00000622633 ANXA3P12429 323 aa11.69□□□□□ -0.54
LITAF-221ENST00000622633 ANXA8P13928 327 aa11.69□□□□□ -0.54
LITAF-221ENST00000622633 CBR1P16152 277 aa11.69□□□□□ -0.54
LITAF-221ENST00000622633 MEF2AQ02078 507 aaPredicted RBP11.69□□□□□ -0.54
LITAF-221ENST00000622633 ST3GAL4Q11206 333 aa11.69□□□□□ -0.54
LITAF-221ENST00000622633 SLBPQ14493 270 aaKnown RBP eCLIP11.69□□□□□ -0.54
LITAF-221ENST00000622633 SNAPC1Q16533 368 aa11.69□□□□□ -0.54
LITAF-221ENST00000622633 MLIPQ5VWP3 458 aa11.69□□□□□ -0.54
LITAF-221ENST00000622633 PLBD1Q6P4A8 553 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms