RNA–Protein interactions for RNA: ENST00000622045.4

SYNRG-231, Transcript of synergin gamma, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-231	ENST00000622045	RPS7	P62081	194 aa	Known RBP	13.5	□□□□□ -0.25
SYNRG-231	ENST00000622045	C17orf107	Q6ZR85	190 aa		13.5	□□□□□ -0.25
SYNRG-231	ENST00000622045	COMTD1	Q86VU5	262 aa		13.5	□□□□□ -0.25
SYNRG-231	ENST00000622045	NEURL3	Q96EH8	262 aa		13.5	□□□□□ -0.25
SYNRG-231	ENST00000622045	FERD3L	Q96RJ6	166 aa		13.5	□□□□□ -0.25
SYNRG-231	ENST00000622045	CPNE7	Q9UBL6	633 aa		13.5	□□□□□ -0.25
SYNRG-231	ENST00000622045	TMEM129	A0AVI4	362 aa		13.5	□□□□□ -0.25
SYNRG-231	ENST00000622045	KPNA3	O00505	521 aa	Predicted RBP	13.5	□□□□□ -0.25
SYNRG-231	ENST00000622045	KCNJ5	P48544	419 aa		13.5	□□□□□ -0.25
SYNRG-231	ENST00000622045	PRLHR	P49683	370 aa		13.5	□□□□□ -0.25
SYNRG-231	ENST00000622045	CDH11	P55287	796 aa		13.5	□□□□□ -0.25
SYNRG-231	ENST00000622045	DGCR2	P98153	550 aa		13.5	□□□□□ -0.25
SYNRG-231	ENST00000622045	OPCML	Q14982	345 aa		13.5	□□□□□ -0.25
SYNRG-231	ENST00000622045	SFRP5	Q5T4F7	317 aa		13.5	□□□□□ -0.25
SYNRG-231	ENST00000622045	HENMT1	Q5T8I9	393 aa	Known RBP	13.5	□□□□□ -0.25
SYNRG-231	ENST00000622045	CPXM2	Q8N436	756 aa		13.5	□□□□□ -0.25
SYNRG-231	ENST00000622045	ELMOD3	Q96FG2	381 aa		13.5	□□□□□ -0.25
SYNRG-231	ENST00000622045	OR2M2	Q96R28	347 aa		13.5	□□□□□ -0.25
SYNRG-231	ENST00000622045	IL21	Q9HBE4	155 aa		13.5	□□□□□ -0.25
SYNRG-231	ENST00000622045	CNIH4	Q9P003	139 aa		13.5	□□□□□ -0.25
SYNRG-231	ENST00000622045		A0A1W2PPK0	400 aa		13.5	□□□□□ -0.25
SYNRG-231	ENST00000622045	PRODH	O43272	600 aa		13.5	□□□□□ -0.25
SYNRG-231	ENST00000622045	SOD2	P04179	222 aa		13.5	□□□□□ -0.25
SYNRG-231	ENST00000622045	BLVRA	P53004	296 aa		13.5	□□□□□ -0.25
SYNRG-231	ENST00000622045	NLRC3	Q7RTR2	1065 aa		13.5	□□□□□ -0.25
SYNRG-231	ENST00000622045	SMPDL3A	Q92484	453 aa		13.5	□□□□□ -0.25
SYNRG-231	ENST00000622045	FCRL4	Q96PJ5	515 aa		13.5	□□□□□ -0.25
SYNRG-231	ENST00000622045	ERMAP	Q96PL5	475 aa	Predicted RBP	13.5	□□□□□ -0.25
SYNRG-231	ENST00000622045	SLC38A2	Q96QD8	506 aa		13.5	□□□□□ -0.25
SYNRG-231	ENST00000622045	MYOF	Q9NZM1	2061 aa		13.5	□□□□□ -0.25
SYNRG-231	ENST00000622045	PI15	O43692	258 aa		13.49	□□□□□ -0.25
SYNRG-231	ENST00000622045	LRG1	P02750	347 aa		13.49	□□□□□ -0.25
SYNRG-231	ENST00000622045	MAPK9	P45984	424 aa		13.49	□□□□□ -0.25
SYNRG-231	ENST00000622045	RAB40B	Q12829	278 aa		13.49	□□□□□ -0.25
SYNRG-231	ENST00000622045	COL9A2	Q14055	689 aa	Predicted RBP	13.49	□□□□□ -0.25
SYNRG-231	ENST00000622045	ASTL	Q6HA08	431 aa	Predicted RBP	13.49	□□□□□ -0.25
SYNRG-231	ENST00000622045	SLC36A4	Q6YBV0	504 aa		13.49	□□□□□ -0.25
SYNRG-231	ENST00000622045	ADCK2	Q7Z695	626 aa		13.49	□□□□□ -0.25
SYNRG-231	ENST00000622045	BBS1	Q8NFJ9	593 aa		13.49	□□□□□ -0.25
SYNRG-231	ENST00000622045	MOSPD2	Q8NHP6	518 aa		13.49	□□□□□ -0.25
SYNRG-231	ENST00000622045	ISG20L2	Q9H9L3	353 aa	Known RBP	13.49	□□□□□ -0.25
SYNRG-231	ENST00000622045	NDOR1	Q9UHB4	597 aa		13.49	□□□□□ -0.25
SYNRG-231	ENST00000622045	PEPD	P12955	493 aa		13.49	□□□□□ -0.25
SYNRG-231	ENST00000622045	TIMP2	P16035	220 aa		13.49	□□□□□ -0.25
SYNRG-231	ENST00000622045	ACSL1	P33121	698 aa		13.49	□□□□□ -0.25
SYNRG-231	ENST00000622045	CTAG1A	P78358	180 aa		13.49	□□□□□ -0.25
SYNRG-231	ENST00000622045	PRAMEF14	Q5SWL7	426 aa		13.49	□□□□□ -0.25
SYNRG-231	ENST00000622045	PRAMEF13	Q5VWM6	474 aa		13.49	□□□□□ -0.25
SYNRG-231	ENST00000622045	LRFN4	Q6PJG9	635 aa		13.49	□□□□□ -0.25
SYNRG-231	ENST00000622045	PRSS45	Q7RTY3	260 aa		13.49	□□□□□ -0.25
SYNRG-231	ENST00000622045	SLC9B2	Q86UD5	537 aa		13.49	□□□□□ -0.25
SYNRG-231	ENST00000622045	ARIH2OS	Q8N7S6	290 aa		13.49	□□□□□ -0.25
SYNRG-231	ENST00000622045	OR5M3	Q8NGP4	307 aa		13.49	□□□□□ -0.25
SYNRG-231	ENST00000622045	ZFPM2	Q8WW38	1151 aa		13.49	□□□□□ -0.25
SYNRG-231	ENST00000622045	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	13.49	□□□□□ -0.25
SYNRG-231	ENST00000622045	RNF186	Q9NXI6	227 aa		13.49	□□□□□ -0.25
SYNRG-231	ENST00000622045	SLC22A23	A1A5C7	686 aa		13.49	□□□□□ -0.25
SYNRG-231	ENST00000622045	KDM4B	O94953	1096 aa		13.49	□□□□□ -0.25
SYNRG-231	ENST00000622045	RPL35	P42766	123 aa	Known RBP	13.49	□□□□□ -0.25
SYNRG-231	ENST00000622045	ERVFC1	P60507	584 aa		13.49	□□□□□ -0.25
SYNRG-231	ENST00000622045	ZP1	P60852	638 aa		13.49	□□□□□ -0.25
SYNRG-231	ENST00000622045	TCTN1	Q2MV58	587 aa		13.49	□□□□□ -0.25
SYNRG-231	ENST00000622045	SLC30A6	Q6NXT4	461 aa		13.49	□□□□□ -0.25
SYNRG-231	ENST00000622045	WASH2P	Q6VEQ5	465 aa		13.49	□□□□□ -0.25
SYNRG-231	ENST00000622045	IKBIP	Q70UQ0	350 aa		13.49	□□□□□ -0.25
SYNRG-231	ENST00000622045	OR2T4	Q8NH00	348 aa		13.49	□□□□□ -0.25
SYNRG-231	ENST00000622045	NEUROD4	Q9HD90	331 aa		13.49	□□□□□ -0.25
SYNRG-231	ENST00000622045	A4GALT	Q9NPC4	353 aa		13.49	□□□□□ -0.25
SYNRG-231	ENST00000622045	ZCCHC3	Q9NUD5	404 aa	Known RBP	13.49	□□□□□ -0.25
SYNRG-231	ENST00000622045	P2RX2	Q9UBL9	471 aa		13.49	□□□□□ -0.25
SYNRG-231	ENST00000622045	FBXL2	Q9UKC9	423 aa		13.49	□□□□□ -0.25
SYNRG-231	ENST00000622045	EXOSC1	Q9Y3B2	195 aa	Known RBP	13.49	□□□□□ -0.25
SYNRG-231	ENST00000622045	SESN1	Q9Y6P5	492 aa		13.49	□□□□□ -0.25
SYNRG-231	ENST00000622045	MEIKIN	A0A087WXM9	373 aa		13.48	□□□□□ -0.25
SYNRG-231	ENST00000622045	HMGN4	O00479	90 aa		13.48	□□□□□ -0.25
SYNRG-231	ENST00000622045	ZP3	P21754	424 aa		13.48	□□□□□ -0.25
SYNRG-231	ENST00000622045	ERVK-21	P61565	698 aa		13.48	□□□□□ -0.25
SYNRG-231	ENST00000622045	GPNMB	Q14956	572 aa		13.48	□□□□□ -0.25
SYNRG-231	ENST00000622045	TCTE1	Q5JU00	501 aa		13.48	□□□□□ -0.25
SYNRG-231	ENST00000622045	RNLS	Q5VYX0	342 aa		13.48	□□□□□ -0.25
SYNRG-231	ENST00000622045	SLC27A4	Q6P1M0	643 aa		13.48	□□□□□ -0.25
SYNRG-231	ENST00000622045	SYT9	Q86SS6	491 aa		13.48	□□□□□ -0.25
SYNRG-231	ENST00000622045	ZNF578	Q96N58	590 aa	Predicted RBP	13.48	□□□□□ -0.25
SYNRG-231	ENST00000622045	CYSLTR2	Q9NS75	346 aa		13.48	□□□□□ -0.25
SYNRG-231	ENST00000622045	NUBP2	Q9Y5Y2	271 aa		13.48	□□□□□ -0.25
SYNRG-231	ENST00000622045	FAM183A	A6NL82	134 aa		13.48	□□□□□ -0.25
SYNRG-231	ENST00000622045	FRS3	O43559	492 aa		13.48	□□□□□ -0.25
SYNRG-231	ENST00000622045	APOC3	P02656	99 aa		13.48	□□□□□ -0.25
SYNRG-231	ENST00000622045	ANKRD34C	P0C6C1	535 aa		13.48	□□□□□ -0.25
SYNRG-231	ENST00000622045	ARL9	Q6T311	187 aa		13.48	□□□□□ -0.25
SYNRG-231	ENST00000622045	ATRAID	Q6UW56	229 aa		13.48	□□□□□ -0.25
SYNRG-231	ENST00000622045	LSM14A	Q8ND56	463 aa	Known RBP	13.48	□□□□□ -0.25
SYNRG-231	ENST00000622045	VOPP1	Q96AW1	172 aa		13.48	□□□□□ -0.25
SYNRG-231	ENST00000622045	WDR89	Q96FK6	387 aa	Predicted RBP	13.48	□□□□□ -0.25
SYNRG-231	ENST00000622045	OR51I1	Q9H343	314 aa		13.48	□□□□□ -0.25
SYNRG-231	ENST00000622045	H2AFY2	Q9P0M6	372 aa	Predicted RBP	13.48	□□□□□ -0.25
SYNRG-231	ENST00000622045	SCP2D1	Q9UJQ7	156 aa		13.48	□□□□□ -0.25
SYNRG-231	ENST00000622045	TAS2R41	P59536	307 aa		13.48	□□□□□ -0.25
SYNRG-231	ENST00000622045	ZNF155	Q12901	538 aa	Predicted RBP	13.48	□□□□□ -0.25
SYNRG-231	ENST00000622045	RAB33A	Q14088	237 aa		13.48	□□□□□ -0.25

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