RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 LAS2Q8IYD9 372 aa7.12□□□□□ -1.27
CLK1-215ENST00000621181 PRR22Q8IZ63 422 aa7.12□□□□□ -1.27
CLK1-215ENST00000621181 DEFB107AQ8IZN7 70 aa7.12□□□□□ -1.27
CLK1-215ENST00000621181 ZCCHC7Q8N3Z6 543 aaKnown RBP7.12□□□□□ -1.27
CLK1-215ENST00000621181 HUS1BQ8NHY5 278 aa7.12□□□□□ -1.27
CLK1-215ENST00000621181 PYDC1Q8WXC3 89 aa7.12□□□□□ -1.27
CLK1-215ENST00000621181 TP53INP1Q96A56 240 aa7.12□□□□□ -1.27
CLK1-215ENST00000621181 PERPQ96FX8 193 aa7.12□□□□□ -1.27
CLK1-215ENST00000621181 MTERF1Q99551 399 aaKnown RBP7.12□□□□□ -1.27
CLK1-215ENST00000621181 PIP5K1AQ99755 562 aa7.12□□□□□ -1.27
CLK1-215ENST00000621181 ZNF226Q9NYT6 803 aa7.12□□□□□ -1.27
CLK1-215ENST00000621181 ROS1P08922 2347 aa7.12□□□□□ -1.27
CLK1-215ENST00000621181 TRIM64A6NGJ6 449 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 TRIM64BA6NI03 449 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 WASHC1A8K0Z3 465 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 HDAC3O15379 428 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 PHGDHO43175 533 aaKnown RBP7.11□□□□□ -1.27
CLK1-215ENST00000621181 AHCYL1O43865 530 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 DLX3O60479 287 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 PDE5AO76074 875 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 RCBTB2O95199 551 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 HSPA4LO95757 839 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 CD1DP15813 335 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 STMN1P16949 149 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 FPR1P21462 350 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 PIK3R1P27986 724 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 ABCD3P28288 659 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 SOX18P35713 384 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 MMP16P51512 607 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 ATP6V0D1P61421 351 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 RPS13P62277 151 aaKnown RBP7.11□□□□□ -1.27
CLK1-215ENST00000621181 LSM12Q3MHD2 195 aaKnown RBP7.11□□□□□ -1.27
CLK1-215ENST00000621181 ARL13AQ5H913 290 aaPredicted RBP7.11□□□□□ -1.27
CLK1-215ENST00000621181 LIPMQ5VYY2 423 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 CYP20A1Q6UW02 462 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 SCIMPQ6UWF3 145 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 PRSS57Q6UWY2 283 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 PLXDC2Q6UX71 529 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 ANGPTL8Q6UXH0 198 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 GRAMD2AQ8IUY3 354 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 GALNT12Q8IXK2 581 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 RNF175Q8N4F7 328 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 ZNF441Q8N8Z8 693 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 OR14L1PQ8NHC6 308 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 ZNF483Q8TF39 744 aaPredicted RBP7.11□□□□□ -1.27
CLK1-215ENST00000621181 NTNG2Q96CW9 530 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 TSPAN17Q96FV3 270 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 TMEM41AQ96HV5 264 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 MAELQ96JY0 434 aaKnown RBP7.11□□□□□ -1.27
CLK1-215ENST00000621181 TUBA1CQ9BQE3 449 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 MED18Q9BUE0 208 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 CD244Q9BZW8 370 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 VCXQ9H320 206 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 PIGMQ9H3S5 423 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 UBTD1Q9HAC8 227 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 TCF7L2Q9NQB0 619 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 OPTCQ9UBM4 332 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 ADGRE2Q9UHX3 823 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 ZDHHC2Q9UIJ5 367 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 SCOCQ9UIL1 159 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 PACSIN3Q9UKS6 424 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 SONP18583 2426 aaKnown RBP7.11□□□□□ -1.27
CLK1-215ENST00000621181 LOC100653049A0A140TA62 436 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 A0A1W2PR48 441 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 A8MXE2 369 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 SUPT3HB4E1H0 165 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 E9PBE3 544 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 TMPRSS11DO60235 418 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 SUPT3HO75486 399 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 KRT34O76011 436 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 WISP3O95389 354 aaPredicted RBP7.11□□□□□ -1.27
CLK1-215ENST00000621181 CLPSP04118 112 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 JUNP05412 331 aaKnown RBP7.11□□□□□ -1.27
CLK1-215ENST00000621181 FAM58BPP0C7Q3 252 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 SLC35E2P0CK97 266 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 CPN1P15169 458 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 EPB42P16452 691 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 PTPN6P29350 595 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 GALNSP34059 522 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 PIK3CBP42338 1070 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 ERFP50548 548 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 RPL14P50914 215 aaKnown RBP7.11□□□□□ -1.27
CLK1-215ENST00000621181 DNAJB13P59910 316 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 IRX1P78414 480 aaPredicted RBP7.11□□□□□ -1.27
CLK1-215ENST00000621181 PHEXP78562 749 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 MXRA7P84157 204 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 ILF2Q12905 390 aaKnown RBP7.11□□□□□ -1.27
CLK1-215ENST00000621181 GAB1Q13480 694 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 E2F2Q14209 437 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 NNATQ16517 81 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 OGFRL1Q5TC84 451 aaPredicted RBP7.11□□□□□ -1.27
CLK1-215ENST00000621181 RNF220Q5VTB9 566 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 GRHL2Q6ISB3 625 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 IFNEQ86WN2 208 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 KCTD4Q8WVF5 259 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 UCN3Q969E3 161 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 ADIPOR1Q96A54 375 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 PIK3IP1Q96FE7 263 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 SHCBP1LQ9BZQ2 653 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 YIPF3Q9GZM5 350 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms