RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 MAP4K2Q12851 820 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 OPN5Q6U736 354 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 NAGSQ8N159 534 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 OR5D16Q8NGK9 328 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 OR8J1Q8NGP2 316 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 OR51Q1Q8NH59 317 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 HINT2Q9BX68 163 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 PINK1Q9BXM7 581 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 BEX2Q9BXY8 128 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 RDH14Q9HBH5 336 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 BEX1Q9HBH7 125 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 MARCH5Q9NX47 278 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 ADAMTS6Q9UKP5 1117 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 GFRA2O00451 464 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 RBBP9O75884 186 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 SNAP29O95721 258 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 PRLP01236 227 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 UGT2B7P16662 529 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 GGT1P19440 569 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 TNFRSF1BP20333 461 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 MAT1AQ00266 395 aaKnown RBP10.74□□□□□ -0.69
CLIP1-219ENST00000620786 KCNAB2Q13303 367 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 GNMTQ14749 295 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 RAB12Q6IQ22 244 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 CDHR3Q6ZTQ4 885 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 SYT14Q8NB59 555 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 RTP4Q96DX8 246 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 SAMD8Q96LT4 415 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 SLC6A18Q96N87 628 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 MTMR10Q9NXD2 777 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 NKX1-2Q9UD57 310 aaPredicted RBP10.74□□□□□ -0.69
CLIP1-219ENST00000620786 PLSCR5A0PG75 271 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 FOXE1O00358 373 aaPredicted RBP10.74□□□□□ -0.69
CLIP1-219ENST00000620786 FESP07332 822 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 DCNP07585 359 aaKnown RBP10.74□□□□□ -0.69
CLIP1-219ENST00000620786 PLEKHN1Q494U1 663 aaPredicted RBP10.74□□□□□ -0.69
CLIP1-219ENST00000620786 EIF5AL1Q6IS14 154 aaKnown RBP10.74□□□□□ -0.69
CLIP1-219ENST00000620786 MINDY1Q8N5J2 469 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 OR5AK2Q8NH90 309 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 SLC6A17Q9H1V8 727 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 M0R3H8 397 aa10.73□□□□□ -0.69
CLIP1-219ENST00000620786 FBP2O00757 339 aa10.73□□□□□ -0.69
CLIP1-219ENST00000620786 DLGAP1O14490 977 aa10.73□□□□□ -0.69
CLIP1-219ENST00000620786 BMP1P13497 986 aa10.73□□□□□ -0.69
CLIP1-219ENST00000620786 CCR7P32248 378 aa10.73□□□□□ -0.69
CLIP1-219ENST00000620786 CD83Q01151 205 aa10.73□□□□□ -0.69
CLIP1-219ENST00000620786 TGFBR3Q03167 851 aa10.73□□□□□ -0.69
CLIP1-219ENST00000620786 VTCN1Q7Z7D3 282 aa10.73□□□□□ -0.69
CLIP1-219ENST00000620786 PRR18Q8N4B5 295 aa10.73□□□□□ -0.69
CLIP1-219ENST00000620786 PNPLA1Q8N8W4 532 aa10.73□□□□□ -0.69
CLIP1-219ENST00000620786 MINDY2Q8NBR6 621 aa10.73□□□□□ -0.69
CLIP1-219ENST00000620786 NPRL2Q8WTW4 380 aa10.73□□□□□ -0.69
CLIP1-219ENST00000620786 SEC14L1Q92503 715 aa10.73□□□□□ -0.69
CLIP1-219ENST00000620786 RFT1Q96AA3 541 aa10.73□□□□□ -0.69
CLIP1-219ENST00000620786 TRIM43Q96BQ3 446 aaPredicted RBP10.73□□□□□ -0.69
CLIP1-219ENST00000620786 ADOQ96SZ5 270 aa10.73□□□□□ -0.69
CLIP1-219ENST00000620786 COPZ2Q9P299 210 aa10.73□□□□□ -0.69
CLIP1-219ENST00000620786 NDUFB2O95178 105 aa10.73□□□□□ -0.69
CLIP1-219ENST00000620786 LCKP06239 509 aa10.73□□□□□ -0.69
CLIP1-219ENST00000620786 CCL11P51671 97 aa10.73□□□□□ -0.69
CLIP1-219ENST00000620786 DCDP81605 110 aaKnown RBP10.73□□□□□ -0.69
CLIP1-219ENST00000620786 CHRNEQ04844 493 aa10.73□□□□□ -0.69
CLIP1-219ENST00000620786 MZT1Q08AG7 82 aa10.73□□□□□ -0.69
CLIP1-219ENST00000620786 HSF5Q4G112 596 aaPredicted RBP10.73□□□□□ -0.69
CLIP1-219ENST00000620786 GPR149Q86SP6 731 aa10.73□□□□□ -0.69
CLIP1-219ENST00000620786 HDAC2Q92769 488 aaKnown RBP10.73□□□□□ -0.69
CLIP1-219ENST00000620786 DKK3Q9UBP4 350 aa10.73□□□□□ -0.69
CLIP1-219ENST00000620786 GPR52Q9Y2T5 361 aa10.73□□□□□ -0.69
CLIP1-219ENST00000620786 USP3Q9Y6I4 520 aa10.73□□□□□ -0.69
CLIP1-219ENST00000620786 OR6C70A6NIJ9 312 aa10.73□□□□□ -0.69
CLIP1-219ENST00000620786 H3BNC9 293 aa10.73□□□□□ -0.69
CLIP1-219ENST00000620786 RNASET2O00584 256 aaKnown RBP10.73□□□□□ -0.69
CLIP1-219ENST00000620786 PET100P0DJ07 73 aa10.73□□□□□ -0.69
CLIP1-219ENST00000620786 NKX3-2P78367 333 aa10.73□□□□□ -0.69
CLIP1-219ENST00000620786 SLC14A2Q15849 920 aa10.73□□□□□ -0.69
CLIP1-219ENST00000620786 GRAMD2AQ8IUY3 354 aa10.73□□□□□ -0.69
CLIP1-219ENST00000620786 FAM71F1Q96KD3 344 aaPredicted RBP10.73□□□□□ -0.69
CLIP1-219ENST00000620786 MUS81Q96NY9 551 aa10.73□□□□□ -0.69
CLIP1-219ENST00000620786 CCDC86Q9H6F5 360 aaKnown RBP10.73□□□□□ -0.69
CLIP1-219ENST00000620786 UBE2ZQ9H832 354 aaPredicted RBP10.73□□□□□ -0.69
CLIP1-219ENST00000620786 ABCG2Q9UNQ0 655 aa10.73□□□□□ -0.69
CLIP1-219ENST00000620786 TRAV6A0A075B6T7 132 aa10.73□□□□□ -0.69
CLIP1-219ENST00000620786 H0YAE9 185 aa10.73□□□□□ -0.69
CLIP1-219ENST00000620786 PTGER1P34995 402 aa10.73□□□□□ -0.69
CLIP1-219ENST00000620786 SOX3P41225 446 aa10.73□□□□□ -0.69
CLIP1-219ENST00000620786 PSPHP78330 225 aa10.73□□□□□ -0.69
CLIP1-219ENST00000620786 GALNT1Q10472 559 aaPredicted RBP10.73□□□□□ -0.69
CLIP1-219ENST00000620786 SFT2D3Q587I9 215 aa10.73□□□□□ -0.69
CLIP1-219ENST00000620786 PARM1Q6UWI2 310 aa10.73□□□□□ -0.69
CLIP1-219ENST00000620786 ALKAL1Q6UXT8 129 aa10.73□□□□□ -0.69
CLIP1-219ENST00000620786 PIANPQ8IYJ0 282 aa10.73□□□□□ -0.69
CLIP1-219ENST00000620786 DTX3Q8N9I9 347 aa10.73□□□□□ -0.69
CLIP1-219ENST00000620786 MYADMQ96S97 322 aa10.73□□□□□ -0.69
CLIP1-219ENST00000620786 ZBTB42B2RXF5 422 aa10.73□□□□□ -0.69
CLIP1-219ENST00000620786 JRKO75564 520 aa10.73□□□□□ -0.69
CLIP1-219ENST00000620786 KCNK5O95279 499 aa10.73□□□□□ -0.69
CLIP1-219ENST00000620786 WDPCPO95876 746 aa10.73□□□□□ -0.69
CLIP1-219ENST00000620786 INHBCP55103 352 aa10.73□□□□□ -0.69
CLIP1-219ENST00000620786 TPTEP56180 551 aa10.73□□□□□ -0.69
CLIP1-219ENST00000620786 MPP2Q14168 576 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms