RNA–Protein interactions for RNA: ENST00000620219.4

CPSF1-213, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF1, Length 4,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-213ENST00000620219 Q96MT0 163 aa14.64□□□□□ -0.07
CPSF1-213ENST00000620219 PINK1Q9BXM7 581 aa14.64□□□□□ -0.07
CPSF1-213ENST00000620219 ITPAQ9BY32 194 aa14.64□□□□□ -0.07
CPSF1-213ENST00000620219 PIGUQ9H490 435 aa14.64□□□□□ -0.07
CPSF1-213ENST00000620219 PISDQ9UG56 409 aa14.64□□□□□ -0.07
CPSF1-213ENST00000620219 MGAT4BQ9UQ53 548 aa14.64□□□□□ -0.07
CPSF1-213ENST00000620219 IGFBP1P08833 259 aaPredicted RBP14.64□□□□□ -0.07
CPSF1-213ENST00000620219 CT62P0C5K7 136 aa14.64□□□□□ -0.07
CPSF1-213ENST00000620219 AHCYP23526 432 aa14.64□□□□□ -0.07
CPSF1-213ENST00000620219 MVDP53602 400 aa14.64□□□□□ -0.07
CPSF1-213ENST00000620219 SNRPNP63162 240 aaKnown RBP14.64□□□□□ -0.07
CPSF1-213ENST00000620219 ENTPD8Q5MY95 495 aa14.64□□□□□ -0.07
CPSF1-213ENST00000620219 ZNF773Q6PK81 442 aa14.64□□□□□ -0.07
CPSF1-213ENST00000620219 SLC41A3Q96GZ6 507 aa14.64□□□□□ -0.07
CPSF1-213ENST00000620219 TRNT1Q96Q11 434 aaKnown RBP14.64□□□□□ -0.07
CPSF1-213ENST00000620219 TBX5Q99593 518 aa14.64□□□□□ -0.07
CPSF1-213ENST00000620219 LPAR4Q99677 370 aa14.64□□□□□ -0.07
CPSF1-213ENST00000620219 G6PC3Q9BUM1 346 aa14.64□□□□□ -0.07
CPSF1-213ENST00000620219 FOLH1BQ9HBA9 442 aa14.64□□□□□ -0.07
CPSF1-213ENST00000620219 ZNF443Q9Y2A4 671 aaPredicted RBP14.64□□□□□ -0.07
CPSF1-213ENST00000620219 FAAHO00519 579 aa14.64□□□□□ -0.07
CPSF1-213ENST00000620219 CDC40O60508 579 aaKnown RBP eCLIP14.64□□□□□ -0.072e-9■■■■□ 25.1
CPSF1-213ENST00000620219 INMTO95050 263 aa14.64□□□□□ -0.07
CPSF1-213ENST00000620219 MASP1P48740 699 aa14.64□□□□□ -0.07
CPSF1-213ENST00000620219 HLCSP50747 726 aa14.64□□□□□ -0.07
CPSF1-213ENST00000620219 CRISP1P54107 249 aa14.64□□□□□ -0.07
CPSF1-213ENST00000620219 NUP107P57740 925 aa14.64□□□□□ -0.07
CPSF1-213ENST00000620219 C1DQ13901 141 aaKnown RBP14.64□□□□□ -0.07
CPSF1-213ENST00000620219 IQCCQ4KMZ1 466 aa14.64□□□□□ -0.07
CPSF1-213ENST00000620219 FAM69BQ5VUD6 431 aa14.64□□□□□ -0.07
CPSF1-213ENST00000620219 GARNL3Q5VVW2 1013 aa14.64□□□□□ -0.07
CPSF1-213ENST00000620219 PMS2CLQ68D20 193 aa14.64□□□□□ -0.07
CPSF1-213ENST00000620219 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.64□□□□□ -0.07
CPSF1-213ENST00000620219 FBXO34Q9NWN3 711 aa14.64□□□□□ -0.07
CPSF1-213ENST00000620219 KLRF1Q9NZS2 232 aa14.64□□□□□ -0.07
CPSF1-213ENST00000620219 GTF2A1LQ9UNN4 478 aa14.64□□□□□ -0.07
CPSF1-213ENST00000620219 C19orf53Q9UNZ5 99 aaPredicted RBP14.64□□□□□ -0.07
CPSF1-213ENST00000620219 SRPK3Q9UPE1 567 aa14.64□□□□□ -0.07
CPSF1-213ENST00000620219 ERGIC3Q9Y282 383 aa14.64□□□□□ -0.07
CPSF1-213ENST00000620219 MED31Q9Y3C7 131 aa14.64□□□□□ -0.07
CPSF1-213ENST00000620219 ZFHX2Q9C0A1 2572 aaPredicted RBP14.64□□□□□ -0.07
CPSF1-213ENST00000620219 TNFSF14O43557 240 aa14.64□□□□□ -0.07
CPSF1-213ENST00000620219 TMED1Q13445 227 aa14.64□□□□□ -0.07
CPSF1-213ENST00000620219 RDH12Q96NR8 316 aa14.64□□□□□ -0.07
CPSF1-213ENST00000620219 SDF2Q99470 211 aa14.64□□□□□ -0.07
CPSF1-213ENST00000620219 LRRN3Q9H3W5 708 aa14.64□□□□□ -0.07
CPSF1-213ENST00000620219 CTSFQ9UBX1 484 aa14.64□□□□□ -0.07
CPSF1-213ENST00000620219 TMEFF2Q9UIK5 374 aaPredicted RBP14.64□□□□□ -0.07
CPSF1-213ENST00000620219 BLOC1S5-TXNDC5H3BN57 136 aa14.63□□□□□ -0.07
CPSF1-213ENST00000620219 K7ESF4 209 aa14.63□□□□□ -0.07
CPSF1-213ENST00000620219 WWP2O00308 870 aa14.63□□□□□ -0.07
CPSF1-213ENST00000620219 BCL10O95999 233 aa14.63□□□□□ -0.07
CPSF1-213ENST00000620219 MT-ND2P03891 347 aa14.63□□□□□ -0.07
CPSF1-213ENST00000620219 AGBL5Q8NDL9 886 aa14.63□□□□□ -0.07
CPSF1-213ENST00000620219 ADAMTS18Q8TE60 1221 aa14.63□□□□□ -0.07
CPSF1-213ENST00000620219 C8orf44Q96CB5 159 aa14.63□□□□□ -0.07
CPSF1-213ENST00000620219 EPYCQ99645 322 aa14.63□□□□□ -0.07
CPSF1-213ENST00000620219 ULBP3Q9BZM4 244 aa14.63□□□□□ -0.07
CPSF1-213ENST00000620219 A0A1B0GX78 115 aa14.63□□□□□ -0.07
CPSF1-213ENST00000620219 MPLP40238 635 aa14.63□□□□□ -0.07
CPSF1-213ENST00000620219 ZBED5Q49AG3 693 aa14.63□□□□□ -0.07
CPSF1-213ENST00000620219 DTWD2Q8NBA8 298 aa14.63□□□□□ -0.07
CPSF1-213ENST00000620219 ABTB1Q969K4 478 aaPredicted RBP14.63□□□□□ -0.07
CPSF1-213ENST00000620219 C7orf34Q96L11 122 aa14.63□□□□□ -0.07
CPSF1-213ENST00000620219 PADI2Q9Y2J8 665 aa14.63□□□□□ -0.07
CPSF1-213ENST00000620219 PTRH2Q9Y3E5 179 aaKnown RBP14.63□□□□□ -0.07
CPSF1-213ENST00000620219 GCM2O75603 506 aaPredicted RBP14.63□□□□□ -0.07
CPSF1-213ENST00000620219 CRHBPP24387 322 aa14.63□□□□□ -0.07
CPSF1-213ENST00000620219 PCSK6P29122 969 aa14.63□□□□□ -0.07
CPSF1-213ENST00000620219 COL19A1Q14993 1142 aa14.63□□□□□ -0.07
CPSF1-213ENST00000620219 NKAIN1Q4KMZ8 207 aa14.63□□□□□ -0.07
CPSF1-213ENST00000620219 ALG10BQ5I7T1 473 aa14.63□□□□□ -0.07
CPSF1-213ENST00000620219 TMEM164Q5U3C3 297 aa14.63□□□□□ -0.07
CPSF1-213ENST00000620219 RTL4Q6ZR62 310 aa14.63□□□□□ -0.07
CPSF1-213ENST00000620219 LACC1Q8IV20 430 aa14.63□□□□□ -0.07
CPSF1-213ENST00000620219 HDAC2Q92769 488 aaKnown RBP14.63□□□□□ -0.07
CPSF1-213ENST00000620219 CLDN23Q96B33 292 aa14.63□□□□□ -0.07
CPSF1-213ENST00000620219 CCDC74BQ96LY2 380 aa14.63□□□□□ -0.07
CPSF1-213ENST00000620219 BTBD2Q9BX70 525 aa14.63□□□□□ -0.07
CPSF1-213ENST00000620219 DEFB126Q9BYW3 111 aa14.63□□□□□ -0.07
CPSF1-213ENST00000620219 DPH1Q9BZG8 443 aa14.63□□□□□ -0.07
CPSF1-213ENST00000620219 EPB41L1Q9H4G0 881 aa14.63□□□□□ -0.07
CPSF1-213ENST00000620219 CBLCQ9ULV8 474 aa14.63□□□□□ -0.07
CPSF1-213ENST00000620219 SPTA1P02549 2419 aa14.63□□□□□ -0.07
CPSF1-213ENST00000620219 CACNA1GO43497 2377 aa14.63□□□□□ -0.07
CPSF1-213ENST00000620219 HRKO00198 91 aa14.62□□□□□ -0.07
CPSF1-213ENST00000620219 ACP2P11117 423 aa14.62□□□□□ -0.07
CPSF1-213ENST00000620219 OTX2P32243 289 aa14.62□□□□□ -0.07
CPSF1-213ENST00000620219 OC90Q02509 493 aaPredicted RBP14.62□□□□□ -0.07
CPSF1-213ENST00000620219 CRYZQ08257 329 aaKnown RBP14.62□□□□□ -0.07
CPSF1-213ENST00000620219 FXNQ16595 210 aa14.62□□□□□ -0.07
CPSF1-213ENST00000620219 NDUFAF6Q330K2 333 aa14.62□□□□□ -0.07
CPSF1-213ENST00000620219 TCTN3Q6NUS6 607 aa14.62□□□□□ -0.07
CPSF1-213ENST00000620219 CEP76Q8TAP6 659 aa14.62□□□□□ -0.07
CPSF1-213ENST00000620219 DNASE2BQ8WZ79 361 aa14.62□□□□□ -0.07
CPSF1-213ENST00000620219 SMPDL3BQ92485 455 aa14.62□□□□□ -0.07
CPSF1-213ENST00000620219 ISOC1Q96CN7 298 aa14.62□□□□□ -0.07
CPSF1-213ENST00000620219 ABCB7O75027 752 aa14.62□□□□□ -0.07
CPSF1-213ENST00000620219 SOX30O94993 753 aa14.62□□□□□ -0.07
CPSF1-213ENST00000620219 ZNF182P17025 639 aaPredicted RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms