RNA–Protein interactions for RNA: ENST00000619322.4

CBWD3-215, Transcript of COBW domain containing 3, human

TSL 5

Gene CBWD3, Length 3,301 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD3-215	ENST00000619322	CDKN2D	P55273	166 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	TAS2R39	P59534	338 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	LSM3	P62310	102 aa	Known RBP	4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	TNFRSF17	Q02223	184 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	RBM20	Q5T481	1227 aa	Known RBP	4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	SP5	Q6BEB4	398 aa	Predicted RBP	4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	VASN	Q6EMK4	673 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	CNST	Q6PJW8	725 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	CYP20A1	Q6UW02	462 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	ISCA2	Q86U28	154 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	DOLPP1	Q86YN1	238 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	CROCCP3	Q8IVE0	287 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	TMEM151B	Q8IW70	566 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	C1orf174	Q8IYL3	243 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	FAM9C	Q8IZT9	166 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	TRIML2	Q8N7C3	387 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	SLC22A8	Q8TCC7	542 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	LKAAEAR1	Q8TD35	194 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	KCTD4	Q8WVF5	259 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	ANKRD49	Q8WVL7	239 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	RERG	Q96A58	199 aa	Predicted RBP	4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	RHBDF1	Q96CC6	855 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	DGCR14	Q96DF8	476 aa	Known RBP	4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	MS4A6E	Q96DS6	147 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	MAP6	Q96JE9	813 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	SIGLEC12	Q96PQ1	595 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	AIF1L	Q9BQI0	150 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	AICDA	Q9GZX7	198 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	EXOSC3	Q9NQT5	275 aa	Known RBP	4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	CD300A	Q9UGN4	299 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	RIMS3	Q9UJD0	308 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	FBXL3	Q9UKT7	428 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	WDFY3	Q8IZQ1	3526 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	PRSS51	A0A1B0GVH4	220 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	ARGFX	A6NJG6	315 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	LRRC3C	A6NJW4	275 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322		A8MT66	165 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	ACOT7	O00154	380 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	KERA	O60938	352 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	MFN2	O95140	757 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	C8B	P07358	591 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	PABPC4L	P0CB38	370 aa	Known RBP	4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	C1GALT1C1L	P0DN25	315 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	ITGAM	P11215	1152 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	CD1D	P15813	335 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	ZNF37A	P17032	561 aa	Predicted RBP	4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	PIK3R1	P27986	724 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	GSS	P48637	474 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	CHRNE	Q04844	493 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	FLYWCH1	Q4VC44	716 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	SYTL3	Q4VX76	610 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	PAGE2B	Q5JRK9	111 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	KANK2	Q63ZY3	851 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	RTL6	Q6ICC9	239 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	TMEM64	Q6YI46	380 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	DCDC5	Q6ZRR9	648 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	FAM92B	Q6ZTR7	304 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	LARP4	Q71RC2	724 aa	Known RBP eCLIP	4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	PIWIL4	Q7Z3Z4	852 aa	Known RBP	4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	CFAP206	Q8IYR0	622 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	KRT78	Q8N1N4	520 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	ZNF615	Q8N8J6	731 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	NEIL3	Q8TAT5	605 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	IPCEF1	Q8WWN9	437 aa	Predicted RBP	4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	FIG4	Q92562	907 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	TAMM41	Q96BW9	452 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	MOAP1	Q96BY2	351 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	NXNL1	Q96CM4	212 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	EGLN2	Q96KS0	407 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	APOL2	Q9BQE5	337 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	TCF7L2	Q9NQB0	619 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	ASF1B	Q9NVP2	202 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	XPR1	Q9UBH6	696 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	MRPS33	Q9Y291	106 aa	Known RBP	4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	TNPO3	Q9Y5L0	923 aa	Known RBP	4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	PMF1-BGLAP	U3KQ54	211 aa		4.95	□□□□□ -1.62
CBWD3-215	ENST00000619322	ARPC4-TTLL3	A0A0A6YYG9	625 aa		4.94	□□□□□ -1.62
CBWD3-215	ENST00000619322	MYO1G	B0I1T2	1018 aa		4.94	□□□□□ -1.62
CBWD3-215	ENST00000619322	DENR	O43583	198 aa	Known RBP	4.94	□□□□□ -1.62
CBWD3-215	ENST00000619322	SLC16A8	O95907	504 aa		4.94	□□□□□ -1.62
CBWD3-215	ENST00000619322	SLC35G6	P0C7Q6	338 aa		4.94	□□□□□ -1.62
CBWD3-215	ENST00000619322	STMN1	P16949	149 aa		4.94	□□□□□ -1.62
CBWD3-215	ENST00000619322	ALOX12	P18054	663 aa		4.94	□□□□□ -1.62
CBWD3-215	ENST00000619322	IMPDH1	P20839	514 aa		4.94	□□□□□ -1.62
CBWD3-215	ENST00000619322	ATP5F1	P24539	256 aa	Predicted RBP	4.94	□□□□□ -1.62
CBWD3-215	ENST00000619322	PGGT1B	P53609	377 aa		4.94	□□□□□ -1.62
CBWD3-215	ENST00000619322	NR1H2	P55055	460 aa		4.94	□□□□□ -1.62
CBWD3-215	ENST00000619322	CLDN6	P56747	220 aa		4.94	□□□□□ -1.62
CBWD3-215	ENST00000619322	VSX2	P58304	361 aa	Predicted RBP	4.94	□□□□□ -1.62
CBWD3-215	ENST00000619322	SLC13A2	Q13183	592 aa		4.94	□□□□□ -1.62
CBWD3-215	ENST00000619322	IKZF1	Q13422	519 aa		4.94	□□□□□ -1.62
CBWD3-215	ENST00000619322	PDE7A	Q13946	482 aa		4.94	□□□□□ -1.62
CBWD3-215	ENST00000619322	ZNF460	Q14592	562 aa		4.94	□□□□□ -1.62
CBWD3-215	ENST00000619322	PRSS53	Q2L4Q9	553 aa		4.94	□□□□□ -1.62
CBWD3-215	ENST00000619322	ZNF678	Q5SXM1	525 aa		4.94	□□□□□ -1.62
CBWD3-215	ENST00000619322	GPR107	Q5VW38	600 aa		4.94	□□□□□ -1.62
CBWD3-215	ENST00000619322	DHDDS	Q86SQ9	333 aa		4.94	□□□□□ -1.62
CBWD3-215	ENST00000619322	PGAM4	Q8N0Y7	254 aa		4.94	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms