RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 EXOSC8Q96B26 276 aaKnown RBP4.86□□□□□ -1.63
SHMT1-211ENST00000618902 VMP1Q96GC9 406 aa4.86□□□□□ -1.63
SHMT1-211ENST00000618902 RBM18Q96H35 190 aaKnown RBP4.86□□□□□ -1.63
SHMT1-211ENST00000618902 NSMCE2Q96MF7 247 aa4.86□□□□□ -1.63
SHMT1-211ENST00000618902 CCDC115Q96NT0 180 aa4.86□□□□□ -1.63
SHMT1-211ENST00000618902 KCTD14Q9BQ13 255 aaPredicted RBP4.86□□□□□ -1.63
SHMT1-211ENST00000618902 UTP23Q9BRU9 249 aaKnown RBP4.86□□□□□ -1.63
SHMT1-211ENST00000618902 ADI1Q9BV57 179 aa4.86□□□□□ -1.63
SHMT1-211ENST00000618902 ALG2Q9H553 416 aa4.86□□□□□ -1.63
SHMT1-211ENST00000618902 MAGIXQ9H6Y5 334 aa4.86□□□□□ -1.63
SHMT1-211ENST00000618902 ANKRA2Q9H9E1 313 aa4.86□□□□□ -1.63
SHMT1-211ENST00000618902 LIN28AQ9H9Z2 209 aaKnown RBP4.86□□□□□ -1.63
SHMT1-211ENST00000618902 CXorf21Q9HAI6 301 aa4.86□□□□□ -1.63
SHMT1-211ENST00000618902 AIG1Q9NVV5 245 aa4.86□□□□□ -1.63
SHMT1-211ENST00000618902 TAS2R7Q9NYW3 318 aa4.86□□□□□ -1.63
SHMT1-211ENST00000618902 MAT2BQ9NZL9 334 aa4.86□□□□□ -1.63
SHMT1-211ENST00000618902 EIF3LQ9Y262 564 aaKnown RBP4.86□□□□□ -1.63
SHMT1-211ENST00000618902 CFL2Q9Y281 166 aa4.86□□□□□ -1.63
SHMT1-211ENST00000618902 DTX4Q9Y2E6 619 aa4.86□□□□□ -1.63
SHMT1-211ENST00000618902 YARS2Q9Y2Z4 477 aaKnown RBP4.86□□□□□ -1.63
SHMT1-211ENST00000618902 TMED5Q9Y3A6 229 aa4.86□□□□□ -1.63
SHMT1-211ENST00000618902 CSAG2Q9Y5P2 127 aa4.86□□□□□ -1.63
SHMT1-211ENST00000618902 CEPT1Q9Y6K0 416 aa4.86□□□□□ -1.63
SHMT1-211ENST00000618902 CLCA3PQ9Y6N3 262 aa4.86□□□□□ -1.63
SHMT1-211ENST00000618902 MED12Q93074 2177 aa4.86□□□□□ -1.63
SHMT1-211ENST00000618902 ICE1Q9Y2F5 2266 aa4.86□□□□□ -1.63
SHMT1-211ENST00000618902 MYO9AB2RTY4 2548 aa4.86□□□□□ -1.63
SHMT1-211ENST00000618902 ABCA12Q86UK0 2595 aa4.86□□□□□ -1.63
SHMT1-211ENST00000618902 CPAMD8Q8IZJ3 1885 aa4.86□□□□□ -1.63
SHMT1-211ENST00000618902 SHANK1Q9Y566 2161 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 PCNX1Q96RV3 2341 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 ANKHD1Q8IWZ3 2542 aaKnown RBP4.85□□□□□ -1.63
SHMT1-211ENST00000618902 APCP25054 2843 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 TRBV11-1A0A0K0K1C0 115 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 A0A1B0GUH1 482 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 C1orf226A1L170 272 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 SH3PXD2BA1X283 911 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 C7orf72A4D263 438 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 GABRR3A8MPY1 467 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 C17orf105B2RV13 164 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 KLRC4-KLRK1H3BQV0 150 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 SCAMP2O15127 329 aaKnown RBP4.85□□□□□ -1.63
SHMT1-211ENST00000618902 CLOCKO15516 846 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 TBX19O60806 448 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 PRAMEF2O60811 474 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 SCN2BO60939 215 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 ERN1O75460 977 aaKnown RBP4.85□□□□□ -1.63
SHMT1-211ENST00000618902 ERAL1O75616 437 aaKnown RBP4.85□□□□□ -1.63
SHMT1-211ENST00000618902 ZFAND5O76080 213 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 KCNH1O95259 989 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 PGM3O95394 542 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 NADKO95544 446 aaPredicted RBP4.85□□□□□ -1.63
SHMT1-211ENST00000618902 CBX7O95931 251 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 F10P00742 488 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 IFNA16P05015 189 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 SLC35E2P0CK97 266 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 LAMP1P11279 417 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 PRPS2P11908 318 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 DRD2P14416 443 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 AGAP20933 346 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 DCKP27707 260 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 MAPK1P28482 360 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 SSTR4P31391 388 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 RYKP34925 604 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 FRKP42685 505 aaPredicted RBP4.85□□□□□ -1.63
SHMT1-211ENST00000618902 CYB561P49447 251 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 HLCSP50747 726 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 ALDH3A2P51648 485 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 RAD23AP54725 363 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 WNT3P56703 355 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 GABARAPL2P60520 117 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 UFM1P61960 85 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 FUT7Q11130 342 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 STX4Q12846 297 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 GK3PQ14409 553 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 ZNF267Q14586 743 aaPredicted RBP4.85□□□□□ -1.63
SHMT1-211ENST00000618902 EXOSC7Q15024 291 aaKnown RBP4.85□□□□□ -1.63
SHMT1-211ENST00000618902 CYP51A1Q16850 503 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 DPY19L1Q2PZI1 675 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 PRICKLE4Q2TBC4 344 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 BTBD16Q32M84 506 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 PLEKHN1Q494U1 663 aaPredicted RBP4.85□□□□□ -1.63
SHMT1-211ENST00000618902 ZNF628Q5EBL2 1059 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 ACER2Q5QJU3 275 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 C6orf10Q5SRN2 563 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 C6orf52Q5T4I8 152 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 FHL5Q5TD97 284 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 GLYATQ6IB77 296 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 NANOGP8Q6NSW7 305 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 FAM180AQ6UWF9 173 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 LINC00696Q6ZRV3 163 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 GK5Q6ZS86 529 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 USP51Q70EK9 711 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 ZNF551Q7Z340 670 aaPredicted RBP4.85□□□□□ -1.63
SHMT1-211ENST00000618902 RPS19BP1Q86WX3 136 aaKnown RBP4.85□□□□□ -1.63
SHMT1-211ENST00000618902 ZNF227Q86WZ6 799 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 HIPK1Q86Z02 1210 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 ZDHHC13Q8IUH4 622 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 C9orf40Q8IXQ3 194 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 CCDC116Q8IYX3 515 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms