RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 CCDC120Q96HB5 630 aa7.52□□□□□ -1.21
NEK3-209ENST00000618856 MAGED4Q96JG8 741 aa7.52□□□□□ -1.21
NEK3-209ENST00000618856 VKORC1Q9BQB6 163 aa7.52□□□□□ -1.21
NEK3-209ENST00000618856 EBF4Q9BQW3 602 aa7.52□□□□□ -1.21
NEK3-209ENST00000618856 SIKE1Q9BRV8 207 aa7.52□□□□□ -1.21
NEK3-209ENST00000618856 BTBD2Q9BX70 525 aa7.52□□□□□ -1.21
NEK3-209ENST00000618856 OR2B2Q9GZK3 357 aa7.52□□□□□ -1.21
NEK3-209ENST00000618856 PRDM14Q9GZV8 571 aa7.52□□□□□ -1.21
NEK3-209ENST00000618856 ACBD3Q9H3P7 528 aa7.52□□□□□ -1.21
NEK3-209ENST00000618856 ZNF385DQ9H6B1 395 aa7.52□□□□□ -1.21
NEK3-209ENST00000618856 METTL7AQ9H8H3 244 aa7.52□□□□□ -1.21
NEK3-209ENST00000618856 MED4Q9NPJ6 270 aa7.52□□□□□ -1.21
NEK3-209ENST00000618856 EQTNQ9NQ60 294 aa7.52□□□□□ -1.21
NEK3-209ENST00000618856 FLRT3Q9NZU0 649 aa7.52□□□□□ -1.21
NEK3-209ENST00000618856 B4GALT7Q9UBV7 327 aa7.52□□□□□ -1.21
NEK3-209ENST00000618856 TINAGQ9UJW2 476 aa7.52□□□□□ -1.21
NEK3-209ENST00000618856 MRTO4Q9UKD2 239 aaKnown RBP7.52□□□□□ -1.21
NEK3-209ENST00000618856 OR10H1Q9Y4A9 318 aa7.52□□□□□ -1.21
NEK3-209ENST00000618856 GMEB1Q9Y692 573 aa7.52□□□□□ -1.21
NEK3-209ENST00000618856 CELSR2Q9HCU4 2923 aa7.52□□□□□ -1.21
NEK3-209ENST00000618856 ADGRG4Q8IZF6 3080 aa7.52□□□□□ -1.21
NEK3-209ENST00000618856 ZNF407Q9C0G0 2248 aa7.51□□□□□ -1.21
NEK3-209ENST00000618856 UQCRHLA0A096LP55 91 aa7.51□□□□□ -1.21
NEK3-209ENST00000618856 TRGV5A0A0B4J1U4 118 aa7.51□□□□□ -1.21
NEK3-209ENST00000618856 TRGV8A0A0C4DH27 118 aa7.51□□□□□ -1.21
NEK3-209ENST00000618856 A0A1W2PQD3 144 aa7.51□□□□□ -1.21
NEK3-209ENST00000618856 PRRG2O14669 202 aa7.51□□□□□ -1.21
NEK3-209ENST00000618856 UBDO15205 165 aa7.51□□□□□ -1.21
NEK3-209ENST00000618856 ZIC3O60481 467 aa7.51□□□□□ -1.21
NEK3-209ENST00000618856 PDE9AO76083 593 aa7.51□□□□□ -1.21
NEK3-209ENST00000618856 UTS2O95399 124 aa7.51□□□□□ -1.21
NEK3-209ENST00000618856 C1QCP02747 245 aa7.51□□□□□ -1.21
NEK3-209ENST00000618856 KRT16P08779 473 aa7.51□□□□□ -1.21
NEK3-209ENST00000618856 ZCCHC18P0CG32 403 aa7.51□□□□□ -1.21
NEK3-209ENST00000618856 SRD5A2P31213 254 aa7.51□□□□□ -1.21
NEK3-209ENST00000618856 S100A3P33764 101 aa7.51□□□□□ -1.21
NEK3-209ENST00000618856 MAGEA8P43361 318 aa7.51□□□□□ -1.21
NEK3-209ENST00000618856 ATP4BP51164 291 aa7.51□□□□□ -1.21
NEK3-209ENST00000618856 DGKQP52824 942 aa7.51□□□□□ -1.21
NEK3-209ENST00000618856 MVDP53602 400 aa7.51□□□□□ -1.21
NEK3-209ENST00000618856 AQP5P55064 265 aa7.51□□□□□ -1.21
NEK3-209ENST00000618856 PER3P56645 1201 aa7.51□□□□□ -1.21
NEK3-209ENST00000618856 B3GALT5-AS1P59052 145 aa7.51□□□□□ -1.21
NEK3-209ENST00000618856 ADORA2A-AS1P86434 159 aa7.51□□□□□ -1.21
NEK3-209ENST00000618856 RCAN2Q14206 197 aa7.51□□□□□ -1.21
NEK3-209ENST00000618856 TMEM44Q2T9K0 475 aa7.51□□□□□ -1.21
NEK3-209ENST00000618856 GRAMD1BQ3KR37 738 aa7.51□□□□□ -1.21
NEK3-209ENST00000618856 GXYLT1Q4G148 440 aa7.51□□□□□ -1.21
NEK3-209ENST00000618856 KLHL26Q53HC5 615 aa7.51□□□□□ -1.21
NEK3-209ENST00000618856 RTL6Q6ICC9 239 aa7.51□□□□□ -1.21
NEK3-209ENST00000618856 ANGPTL8Q6UXH0 198 aa7.51□□□□□ -1.21
NEK3-209ENST00000618856 RPTNQ6XPR3 784 aa7.51□□□□□ -1.21
NEK3-209ENST00000618856 ZAR1Q86SH2 424 aa7.51□□□□□ -1.21
NEK3-209ENST00000618856 FUNDC1Q8IVP5 155 aa7.51□□□□□ -1.21
NEK3-209ENST00000618856 MARVELD2Q8N4S9 558 aa7.51□□□□□ -1.21
NEK3-209ENST00000618856 OR2M3Q8NG83 312 aa7.51□□□□□ -1.21
NEK3-209ENST00000618856 GPR151Q8TDV0 419 aa7.51□□□□□ -1.21
NEK3-209ENST00000618856 ITLN2Q8WWU7 325 aaPredicted RBP7.51□□□□□ -1.21
NEK3-209ENST00000618856 OIT3Q8WWZ8 545 aa7.51□□□□□ -1.21
NEK3-209ENST00000618856 SLC9A6Q92581 669 aa7.51□□□□□ -1.21
NEK3-209ENST00000618856 RMND5BQ96G75 393 aaPredicted RBP7.51□□□□□ -1.21
NEK3-209ENST00000618856 OR7D2Q96RA2 312 aa7.51□□□□□ -1.21
NEK3-209ENST00000618856 TIMP4Q99727 224 aa7.51□□□□□ -1.21
NEK3-209ENST00000618856 G6PC3Q9BUM1 346 aa7.51□□□□□ -1.21
NEK3-209ENST00000618856 TP63Q9H3D4 680 aaPredicted RBP7.51□□□□□ -1.21
NEK3-209ENST00000618856 TCF7L2Q9NQB0 619 aa7.51□□□□□ -1.21
NEK3-209ENST00000618856 PNPLA3Q9NST1 481 aa7.51□□□□□ -1.21
NEK3-209ENST00000618856 FBXO34Q9NWN3 711 aa7.51□□□□□ -1.21
NEK3-209ENST00000618856 KLRF1Q9NZS2 232 aa7.51□□□□□ -1.21
NEK3-209ENST00000618856 FBXL2Q9UKC9 423 aa7.51□□□□□ -1.21
NEK3-209ENST00000618856 SNX8Q9Y5X2 465 aa7.51□□□□□ -1.21
NEK3-209ENST00000618856 KCNE3Q9Y6H6 103 aa7.51□□□□□ -1.21
NEK3-209ENST00000618856 GTF3C1Q12789 2109 aa7.51□□□□□ -1.21
NEK3-209ENST00000618856 SPTBN1Q01082 2364 aaKnown RBP7.51□□□□□ -1.21
NEK3-209ENST00000618856 CRYBG3Q68DQ2 2970 aa7.5□□□□□ -1.21
NEK3-209ENST00000618856 DOPEY2Q9Y3R5 2298 aa7.5□□□□□ -1.21
NEK3-209ENST00000618856 NINQ8N4C6 2090 aa7.5□□□□□ -1.21
NEK3-209ENST00000618856 RNF103-CHMP3A0A140T963 221 aa7.5□□□□□ -1.21
NEK3-209ENST00000618856 FAM234BA2RU67 622 aa7.5□□□□□ -1.21
NEK3-209ENST00000618856 PRAMEF27A3QJZ7 478 aa7.5□□□□□ -1.21
NEK3-209ENST00000618856 C2orf72A6NCS6 295 aa7.5□□□□□ -1.21
NEK3-209ENST00000618856 CCDC154A6NI56 674 aa7.5□□□□□ -1.21
NEK3-209ENST00000618856 DUXAA6NLW8 204 aa7.5□□□□□ -1.21
NEK3-209ENST00000618856 C17orf51A8MQB3 221 aa7.5□□□□□ -1.21
NEK3-209ENST00000618856 CCL21O00585 134 aa7.5□□□□□ -1.21
NEK3-209ENST00000618856 GNB5O14775 395 aa7.5□□□□□ -1.21
NEK3-209ENST00000618856 CDC40O60508 579 aaKnown RBP eCLIP7.5□□□□□ -1.21
NEK3-209ENST00000618856 ZG16O60844 167 aa7.5□□□□□ -1.21
NEK3-209ENST00000618856 DIAPH2O60879 1101 aa7.5□□□□□ -1.21
NEK3-209ENST00000618856 DNAJA2O60884 412 aa7.5□□□□□ -1.21
NEK3-209ENST00000618856 WDR1O75083 606 aa7.5□□□□□ -1.21
NEK3-209ENST00000618856 OXSR1O95747 527 aaPredicted RBP7.5□□□□□ -1.21
NEK3-209ENST00000618856 CLDN1O95832 211 aa7.5□□□□□ -1.21
NEK3-209ENST00000618856 ACTL6AO96019 429 aa7.5□□□□□ -1.21
NEK3-209ENST00000618856 AK1P00568 194 aa7.5□□□□□ -1.21
NEK3-209ENST00000618856 HOXD4P09016 255 aaPredicted RBP7.5□□□□□ -1.21
NEK3-209ENST00000618856 CPN1P15169 458 aa7.5□□□□□ -1.21
NEK3-209ENST00000618856 ABOP16442 354 aa7.5□□□□□ -1.21
NEK3-209ENST00000618856 GDF1P27539 372 aa7.5□□□□□ -1.21
NEK3-209ENST00000618856 PTGER4P35408 488 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms