RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 C18orf63Q68DL7 685 aa19.08■□□□□ 0.64
NEK3-208ENST00000618534 PLEKHM3Q6ZWE6 761 aa19.08■□□□□ 0.64
NEK3-208ENST00000618534 DTX3Q8N9I9 347 aa19.08■□□□□ 0.64
NEK3-208ENST00000618534 SLC37A3Q8NCC5 494 aa19.08■□□□□ 0.64
NEK3-208ENST00000618534 HDHD2Q9H0R4 259 aa19.08■□□□□ 0.64
NEK3-208ENST00000618534 HINT3Q9NQE9 182 aaKnown RBP19.08■□□□□ 0.64
NEK3-208ENST00000618534 GPSM3Q9Y4H4 160 aa19.08■□□□□ 0.64
NEK3-208ENST00000618534 MKI67P46013 3256 aaKnown RBP19.08■□□□□ 0.64
NEK3-208ENST00000618534 AIFM1O95831 613 aa19.08■□□□□ 0.64
NEK3-208ENST00000618534 STAT5AP42229 794 aa19.08■□□□□ 0.64
NEK3-208ENST00000618534 ERVFC1P60507 584 aa19.08■□□□□ 0.64
NEK3-208ENST00000618534 TMEM44Q2T9K0 475 aa19.08■□□□□ 0.64
NEK3-208ENST00000618534 PRAMEF8Q5VWM4 474 aa19.08■□□□□ 0.64
NEK3-208ENST00000618534 PRAMEF7Q5VXH5 474 aa19.08■□□□□ 0.64
NEK3-208ENST00000618534 ZNF620Q6ZNG0 422 aa19.08■□□□□ 0.64
NEK3-208ENST00000618534 GJD3Q8N144 294 aa19.08■□□□□ 0.64
NEK3-208ENST00000618534 OR51G2Q8NGK0 314 aa19.08■□□□□ 0.64
NEK3-208ENST00000618534 TMEM255BQ8WV15 326 aa19.08■□□□□ 0.64
NEK3-208ENST00000618534 ACOT11Q8WXI4 607 aaPredicted RBP19.08■□□□□ 0.64
NEK3-208ENST00000618534 AKAP1Q92667 903 aaKnown RBP eCLIP19.08■□□□□ 0.64
NEK3-208ENST00000618534 ART5Q96L15 291 aa19.08■□□□□ 0.64
NEK3-208ENST00000618534 TNFRSF10DQ9UBN6 386 aa19.08■□□□□ 0.64
NEK3-208ENST00000618534 ENTPD4Q9Y227 616 aa19.08■□□□□ 0.64
NEK3-208ENST00000618534 GTPBP1O00178 669 aaKnown RBP19.07■□□□□ 0.64
NEK3-208ENST00000618534 LANCL1O43813 399 aa19.07■□□□□ 0.64
NEK3-208ENST00000618534 ZIC2O95409 532 aaPredicted RBP19.07■□□□□ 0.64
NEK3-208ENST00000618534 FGF19O95750 216 aa19.07■□□□□ 0.64
NEK3-208ENST00000618534 P2RX3P56373 397 aa19.07■□□□□ 0.64
NEK3-208ENST00000618534 ARPC4P59998 168 aa19.07■□□□□ 0.64
NEK3-208ENST00000618534 TGM3Q08188 693 aa19.07■□□□□ 0.64
NEK3-208ENST00000618534 C19orf57Q0VDD7 668 aa19.07■□□□□ 0.64
NEK3-208ENST00000618534 C6orf132Q5T0Z8 1188 aa19.07■□□□□ 0.64
NEK3-208ENST00000618534 IL20RBQ6UXL0 311 aa19.07■□□□□ 0.64
NEK3-208ENST00000618534 CPOQ8IVL8 374 aa19.07■□□□□ 0.64
NEK3-208ENST00000618534 SFTPA1Q8IWL2 248 aa19.07■□□□□ 0.64
NEK3-208ENST00000618534 NR4A3Q92570 626 aa19.07■□□□□ 0.64
NEK3-208ENST00000618534 FCRL4Q96PJ5 515 aa19.07■□□□□ 0.64
NEK3-208ENST00000618534 FERD3LQ96RJ6 166 aa19.07■□□□□ 0.64
NEK3-208ENST00000618534 TEX12Q9BXU0 123 aa19.07■□□□□ 0.64
NEK3-208ENST00000618534 SLC28A3Q9HAS3 691 aa19.07■□□□□ 0.64
NEK3-208ENST00000618534 PTGFRNQ9P2B2 879 aa19.07■□□□□ 0.64
NEK3-208ENST00000618534 TBX21Q9UL17 535 aa19.07■□□□□ 0.64
NEK3-208ENST00000618534 ZFR2Q9UPR6 939 aaKnown RBP19.07■□□□□ 0.64
NEK3-208ENST00000618534 SIRT4Q9Y6E7 314 aaPredicted RBP19.07■□□□□ 0.64
NEK3-208ENST00000618534 KLF4O43474 513 aa19.06■□□□□ 0.64
NEK3-208ENST00000618534 RNF13O43567 381 aa19.06■□□□□ 0.64
NEK3-208ENST00000618534 PAHP00439 452 aa19.06■□□□□ 0.64
NEK3-208ENST00000618534 HIST1H1TP22492 207 aaPredicted RBP19.06■□□□□ 0.64
NEK3-208ENST00000618534 RGS8P57771 180 aaPredicted RBP19.06■□□□□ 0.64
NEK3-208ENST00000618534 CDK3Q00526 305 aa19.06■□□□□ 0.64
NEK3-208ENST00000618534 PRDX1Q06830 199 aaKnown RBP19.06■□□□□ 0.64
NEK3-208ENST00000618534 GPR176Q14439 515 aa19.06■□□□□ 0.64
NEK3-208ENST00000618534 ELAVL3Q14576 367 aaKnown RBP19.06■□□□□ 0.64
NEK3-208ENST00000618534 PLPP4Q5VZY2 271 aa19.06■□□□□ 0.64
NEK3-208ENST00000618534 ADAMTSL4Q6UY14 1074 aa19.06■□□□□ 0.64
NEK3-208ENST00000618534 ACOT4Q8N9L9 421 aa19.06■□□□□ 0.64
NEK3-208ENST00000618534 NUP43Q8NFH3 380 aa19.06■□□□□ 0.64
NEK3-208ENST00000618534 OR9A2Q8NGT5 310 aa19.06■□□□□ 0.64
NEK3-208ENST00000618534 OR2A1Q8NGT9 310 aa19.06■□□□□ 0.64
NEK3-208ENST00000618534 ZFPM2Q8WW38 1151 aa19.06■□□□□ 0.64
NEK3-208ENST00000618534 CREB3L1Q96BA8 519 aa19.06■□□□□ 0.64
NEK3-208ENST00000618534 MS4A6EQ96DS6 147 aa19.06■□□□□ 0.64
NEK3-208ENST00000618534 ANKRD19PQ9H560 264 aa19.06■□□□□ 0.64
NEK3-208ENST00000618534 MED17Q9NVC6 651 aa19.06■□□□□ 0.64
NEK3-208ENST00000618534 EDDM13A0A1B0GTR0 161 aa19.06■□□□□ 0.64
NEK3-208ENST00000618534 RGS9O75916 674 aaPredicted RBP19.06■□□□□ 0.64
NEK3-208ENST00000618534 PRR5P85299 388 aa19.06■□□□□ 0.64
NEK3-208ENST00000618534 DBPQ10586 325 aaPredicted RBP19.06■□□□□ 0.64
NEK3-208ENST00000618534 DECR1Q16698 335 aa19.06■□□□□ 0.64
NEK3-208ENST00000618534 TMEM35AQ53FP2 167 aa19.06■□□□□ 0.64
NEK3-208ENST00000618534 SMARCD3Q6STE5 483 aa19.06■□□□□ 0.64
NEK3-208ENST00000618534 ASB18Q6ZVZ8 466 aa19.06■□□□□ 0.64
NEK3-208ENST00000618534 GDF7Q7Z4P5 450 aa19.06■□□□□ 0.64
NEK3-208ENST00000618534 HHIPL1Q96JK4 782 aa19.06■□□□□ 0.64
NEK3-208ENST00000618534 SAMD8Q96LT4 415 aa19.06■□□□□ 0.64
NEK3-208ENST00000618534 SYNDIG1Q9H7V2 258 aa19.06■□□□□ 0.64
NEK3-208ENST00000618534 ZC3H12DA2A288 527 aaKnown RBP19.05■□□□□ 0.64
NEK3-208ENST00000618534 CDC42EP2O14613 210 aa19.05■□□□□ 0.64
NEK3-208ENST00000618534 SLC9A3R1O14745 358 aaPredicted RBP19.05■□□□□ 0.64
NEK3-208ENST00000618534 EMC8O43402 210 aa19.05■□□□□ 0.64
NEK3-208ENST00000618534 FCMRO60667 390 aa19.05■□□□□ 0.64
NEK3-208ENST00000618534 TFPIP10646 304 aa19.05■□□□□ 0.64
NEK3-208ENST00000618534 CERS1P27544 350 aa19.05■□□□□ 0.64
NEK3-208ENST00000618534 IFNA8P32881 189 aa19.05■□□□□ 0.64
NEK3-208ENST00000618534 MRPL28Q13084 256 aaKnown RBP19.05■□□□□ 0.64
NEK3-208ENST00000618534 MLF2Q15773 248 aaPredicted RBP19.05■□□□□ 0.64
NEK3-208ENST00000618534 ZIC1Q15915 447 aa19.05■□□□□ 0.64
NEK3-208ENST00000618534 C16orf62Q7Z3J2 963 aa19.05■□□□□ 0.64
NEK3-208ENST00000618534 SLC41A3Q96GZ6 507 aa19.05■□□□□ 0.64
NEK3-208ENST00000618534 MCHR1Q99705 422 aa19.05■□□□□ 0.64
NEK3-208ENST00000618534 TRAF4Q9BUZ4 470 aaPredicted RBP19.05■□□□□ 0.64
NEK3-208ENST00000618534 ZDHHC4Q9NPG8 344 aa19.05■□□□□ 0.64
NEK3-208ENST00000618534 PRDM7Q9NQW5 492 aa19.05■□□□□ 0.64
NEK3-208ENST00000618534 H2AFY2Q9P0M6 372 aaPredicted RBP19.05■□□□□ 0.64
NEK3-208ENST00000618534 LINC00271P0C7V0 271 aa19.05■□□□□ 0.64
NEK3-208ENST00000618534 CEBPBP17676 345 aa19.05■□□□□ 0.64
NEK3-208ENST00000618534 SLC6A1P30531 599 aa19.05■□□□□ 0.64
NEK3-208ENST00000618534 P2RY2P41231 377 aa19.05■□□□□ 0.64
NEK3-208ENST00000618534 GCGRP47871 477 aa19.05■□□□□ 0.64
NEK3-208ENST00000618534 MRM1Q6IN84 353 aaKnown RBP19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms