RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 C12orf45Q8N5I9 185 aaPredicted RBP10.08□□□□□ -0.8
CLTCL1-209ENST00000617103 CELF2-AS1Q8N7Q2 184 aa10.08□□□□□ -0.8
CLTCL1-209ENST00000617103 ACVR1CQ8NER5 493 aa10.08□□□□□ -0.8
CLTCL1-209ENST00000617103 OR51L1Q8NGJ5 315 aa10.08□□□□□ -0.8
CLTCL1-209ENST00000617103 GPR148Q8TDV2 347 aa10.08□□□□□ -0.8
CLTCL1-209ENST00000617103 KCTD12Q96CX2 325 aaKnown RBP10.08□□□□□ -0.8
CLTCL1-209ENST00000617103 BORCS8Q96FH0 119 aa10.08□□□□□ -0.8
CLTCL1-209ENST00000617103 C16orf58Q96GQ5 468 aa10.08□□□□□ -0.8
CLTCL1-209ENST00000617103 PTGES2Q9H7Z7 377 aa10.08□□□□□ -0.8
CLTCL1-209ENST00000617103 METTL7AQ9H8H3 244 aa10.08□□□□□ -0.8
CLTCL1-209ENST00000617103 ARNT2Q9HBZ2 717 aa10.08□□□□□ -0.8
CLTCL1-209ENST00000617103 ENY2Q9NPA8 101 aa10.08□□□□□ -0.8
CLTCL1-209ENST00000617103 E2F3O00716 465 aa10.08□□□□□ -0.8
CLTCL1-209ENST00000617103 AGPAT2O15120 278 aa10.08□□□□□ -0.8
CLTCL1-209ENST00000617103 PPP1R3DO95685 299 aa10.08□□□□□ -0.8
CLTCL1-209ENST00000617103 RNF144AP50876 292 aaPredicted RBP10.08□□□□□ -0.8
CLTCL1-209ENST00000617103 ZNF674Q2M3X9 581 aa10.08□□□□□ -0.8
CLTCL1-209ENST00000617103 CHADLQ6NUI6 762 aa10.08□□□□□ -0.8
CLTCL1-209ENST00000617103 LSMEM2Q8N112 164 aa10.08□□□□□ -0.8
CLTCL1-209ENST00000617103 ZNF587Q96SQ5 575 aaPredicted RBP10.08□□□□□ -0.8
CLTCL1-209ENST00000617103 PINK1Q9BXM7 581 aa10.08□□□□□ -0.8
CLTCL1-209ENST00000617103 DPH1Q9BZG8 443 aa10.08□□□□□ -0.8
CLTCL1-209ENST00000617103 METTL17Q9H7H0 456 aaPredicted RBP10.08□□□□□ -0.8
CLTCL1-209ENST00000617103 DDX31Q9H8H2 851 aaKnown RBP10.08□□□□□ -0.8
CLTCL1-209ENST00000617103 PSORS1C1Q9UIG5 152 aa10.08□□□□□ -0.8
CLTCL1-209ENST00000617103 A6NIN4 97 aa10.08□□□□□ -0.8
CLTCL1-209ENST00000617103 STC2O76061 302 aa10.08□□□□□ -0.8
CLTCL1-209ENST00000617103 RBMS1P29558 406 aaKnown RBP10.08□□□□□ -0.8
CLTCL1-209ENST00000617103 BDKRB2P30411 391 aa10.08□□□□□ -0.8
CLTCL1-209ENST00000617103 RPS27AP62979 156 aaKnown RBP10.08□□□□□ -0.8
CLTCL1-209ENST00000617103 UBA52P62987 128 aaKnown RBP10.08□□□□□ -0.8
CLTCL1-209ENST00000617103 PTPRRQ15256 657 aa10.08□□□□□ -0.8
CLTCL1-209ENST00000617103 PRRT3Q5FWE3 981 aa10.08□□□□□ -0.8
CLTCL1-209ENST00000617103 SYT6Q5T7P8 510 aaPredicted RBP10.08□□□□□ -0.8
CLTCL1-209ENST00000617103 ZNF585AQ6P3V2 769 aa10.08□□□□□ -0.8
CLTCL1-209ENST00000617103 SLC35F2Q8IXU6 374 aa10.08□□□□□ -0.8
CLTCL1-209ENST00000617103 CLDN22Q8N7P3 220 aa10.08□□□□□ -0.8
CLTCL1-209ENST00000617103 BOLLQ8N9W6 283 aaKnown RBP10.08□□□□□ -0.8
CLTCL1-209ENST00000617103 PRRC1Q96M27 445 aa10.08□□□□□ -0.8
CLTCL1-209ENST00000617103 C16orf70Q9BSU1 422 aa10.08□□□□□ -0.8
CLTCL1-209ENST00000617103 SLC2A11Q9BYW1 496 aa10.08□□□□□ -0.8
CLTCL1-209ENST00000617103 BOLA1Q9Y3E2 137 aa10.08□□□□□ -0.8
CLTCL1-209ENST00000617103 XRN1Q8IZH2 1706 aaKnown RBP10.08□□□□□ -0.8
CLTCL1-209ENST00000617103 FEZF1A0PJY2 475 aa10.08□□□□□ -0.8
CLTCL1-209ENST00000617103 NPC1O15118 1278 aa10.08□□□□□ -0.8
CLTCL1-209ENST00000617103 TXNL1O43396 289 aa10.08□□□□□ -0.8
CLTCL1-209ENST00000617103 GMDSO60547 372 aa10.08□□□□□ -0.8
CLTCL1-209ENST00000617103 GIPRP48546 466 aa10.08□□□□□ -0.8
CLTCL1-209ENST00000617103 FPGSQ05932 587 aa10.08□□□□□ -0.8
CLTCL1-209ENST00000617103 OPCMLQ14982 345 aa10.08□□□□□ -0.8
CLTCL1-209ENST00000617103 PPA1Q15181 289 aa10.08□□□□□ -0.8
CLTCL1-209ENST00000617103 SF3B4Q15427 424 aaKnown RBP eCLIP10.08□□□□□ -0.82e-8■■■■□ 20.6
CLTCL1-209ENST00000617103 LRRC26Q2I0M4 334 aa10.08□□□□□ -0.8
CLTCL1-209ENST00000617103 ARHGAP40Q5TG30 622 aa10.08□□□□□ -0.8
CLTCL1-209ENST00000617103 ZNF546Q86UE3 836 aa10.08□□□□□ -0.8
CLTCL1-209ENST00000617103 SERPINA12Q8IW75 414 aa10.08□□□□□ -0.8
CLTCL1-209ENST00000617103 LAX1Q8IWV1 398 aa10.08□□□□□ -0.8
CLTCL1-209ENST00000617103 OR5M3Q8NGP4 307 aa10.08□□□□□ -0.8
CLTCL1-209ENST00000617103 NINJ1Q92982 152 aa10.08□□□□□ -0.8
CLTCL1-209ENST00000617103 IRF7Q92985 503 aa10.08□□□□□ -0.8
CLTCL1-209ENST00000617103 ZMYND19Q96E35 227 aaPredicted RBP10.08□□□□□ -0.8
CLTCL1-209ENST00000617103 SCLYQ96I15 445 aa10.08□□□□□ -0.8
CLTCL1-209ENST00000617103 ZNF583Q96ND8 569 aa10.08□□□□□ -0.8
CLTCL1-209ENST00000617103 MVB12BQ9H7P6 319 aa10.08□□□□□ -0.8
CLTCL1-209ENST00000617103 WASH6PQ9NQA3 447 aa10.08□□□□□ -0.8
CLTCL1-209ENST00000617103 SLC7A11Q9UPY5 501 aa10.08□□□□□ -0.8
CLTCL1-209ENST00000617103 LMO7Q8WWI1 1683 aa10.08□□□□□ -0.8
CLTCL1-209ENST00000617103 ANKRD34BA5PLL1 514 aa10.07□□□□□ -0.8
CLTCL1-209ENST00000617103 SLC43A1O75387 559 aa10.07□□□□□ -0.8
CLTCL1-209ENST00000617103 SLC34A2O95436 690 aa10.07□□□□□ -0.8
CLTCL1-209ENST00000617103 ACP2P11117 423 aa10.07□□□□□ -0.8
CLTCL1-209ENST00000617103 TAZQ16635 292 aa10.07□□□□□ -0.8
CLTCL1-209ENST00000617103 MPP7Q5T2T1 576 aa10.07□□□□□ -0.8
CLTCL1-209ENST00000617103 NADSYN1Q6IA69 706 aa10.07□□□□□ -0.8
CLTCL1-209ENST00000617103 ERN2Q76MJ5 926 aaKnown RBP10.07□□□□□ -0.8
CLTCL1-209ENST00000617103 PIANPQ8IYJ0 282 aa10.07□□□□□ -0.8
CLTCL1-209ENST00000617103 TMEM163Q8TC26 289 aa10.07□□□□□ -0.8
CLTCL1-209ENST00000617103 HOXB13Q92826 284 aaPredicted RBP10.07□□□□□ -0.8
CLTCL1-209ENST00000617103 PGAM5Q96HS1 289 aa10.07□□□□□ -0.8
CLTCL1-209ENST00000617103 TNFRSF10AO00220 468 aa10.07□□□□□ -0.8
CLTCL1-209ENST00000617103 ANKRD28O15084 1053 aa10.07□□□□□ -0.8
CLTCL1-209ENST00000617103 SLC16A6O15403 523 aa10.07□□□□□ -0.8
CLTCL1-209ENST00000617103 FABP7O15540 132 aa10.07□□□□□ -0.8
CLTCL1-209ENST00000617103 PEX14O75381 377 aa10.07□□□□□ -0.8
CLTCL1-209ENST00000617103 ARSBP15848 533 aa10.07□□□□□ -0.8
CLTCL1-209ENST00000617103 CTXN1P60606 82 aa10.07□□□□□ -0.8
CLTCL1-209ENST00000617103 OXA1LQ15070 435 aa10.07□□□□□ -0.8
CLTCL1-209ENST00000617103 ZNF792Q3KQV3 632 aa10.07□□□□□ -0.8
CLTCL1-209ENST00000617103 MAVSQ7Z434 540 aa10.07□□□□□ -0.8
CLTCL1-209ENST00000617103 KLHDC8AQ8IYD2 350 aa10.07□□□□□ -0.8
CLTCL1-209ENST00000617103 LRRC56Q8IYG6 542 aaPredicted RBP10.07□□□□□ -0.8
CLTCL1-209ENST00000617103 SYNPRQ8TBG9 265 aa10.07□□□□□ -0.8
CLTCL1-209ENST00000617103 C3orf49Q96BT1 292 aa10.07□□□□□ -0.8
CLTCL1-209ENST00000617103 SAMD11Q96NU1 681 aa10.07□□□□□ -0.8
CLTCL1-209ENST00000617103 IL26Q9NPH9 171 aa10.07□□□□□ -0.8
CLTCL1-209ENST00000617103 INPP5EQ9NRR6 644 aa10.07□□□□□ -0.8
CLTCL1-209ENST00000617103 LRFN1Q9P244 771 aa10.07□□□□□ -0.8
CLTCL1-209ENST00000617103 V9GY05 133 aa10.07□□□□□ -0.8
CLTCL1-209ENST00000617103 PIK3C2AO00443 1686 aa10.07□□□□□ -0.8
CLTCL1-209ENST00000617103 IGKV6D-21A0A0A0MT36 114 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms