RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 KIR3DP1A8MWS1 328 aa12.15□□□□□ -0.46
MDC1-209ENST00000613547 CLIC1O00299 241 aa12.15□□□□□ -0.46
MDC1-209ENST00000613547 STX11O75558 287 aa12.15□□□□□ -0.46
MDC1-209ENST00000613547 KRT34O76011 436 aa12.15□□□□□ -0.46
MDC1-209ENST00000613547 IGKV1D-16P01601 117 aa12.15□□□□□ -0.46
MDC1-209ENST00000613547 NGFRP08138 427 aa12.15□□□□□ -0.46
MDC1-209ENST00000613547 ELAVL4P26378 380 aaKnown RBP12.15□□□□□ -0.46
MDC1-209ENST00000613547 PTPN6P29350 595 aa12.15□□□□□ -0.46
MDC1-209ENST00000613547 EVI2BP34910 448 aa12.15□□□□□ -0.46
MDC1-209ENST00000613547 CASP9P55211 416 aa12.15□□□□□ -0.46
MDC1-209ENST00000613547 FADDQ13158 208 aa12.15□□□□□ -0.46
MDC1-209ENST00000613547 GNA13Q14344 377 aa12.15□□□□□ -0.46
MDC1-209ENST00000613547 GTDC1Q4AE62 458 aa12.15□□□□□ -0.46
MDC1-209ENST00000613547 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.15□□□□□ -0.46
MDC1-209ENST00000613547 CCNJQ5T5M9 372 aa12.15□□□□□ -0.46
MDC1-209ENST00000613547 BNC2Q6ZN30 1099 aaPredicted RBP12.15□□□□□ -0.46
MDC1-209ENST00000613547 SNX32Q86XE0 403 aa12.15□□□□□ -0.46
MDC1-209ENST00000613547 PCYOX1LQ8NBM8 494 aa12.15□□□□□ -0.46
MDC1-209ENST00000613547 CHDHQ8NE62 594 aaPredicted RBP12.15□□□□□ -0.46
MDC1-209ENST00000613547 OR52N2Q8NGI0 321 aa12.15□□□□□ -0.46
MDC1-209ENST00000613547 RP9Q8TA86 221 aaKnown RBP12.15□□□□□ -0.46
MDC1-209ENST00000613547 NR4A3Q92570 626 aa12.15□□□□□ -0.46
MDC1-209ENST00000613547 AURKBQ96GD4 344 aaPredicted RBP12.15□□□□□ -0.46
MDC1-209ENST00000613547 TMEM41AQ96HV5 264 aa12.15□□□□□ -0.46
MDC1-209ENST00000613547 TTTY12Q9BZ98 90 aa12.15□□□□□ -0.46
MDC1-209ENST00000613547 SERHL2Q9H4I8 314 aa12.15□□□□□ -0.46
MDC1-209ENST00000613547 POLE3Q9NRF9 147 aa12.15□□□□□ -0.46
MDC1-209ENST00000613547 TUBA8Q9NY65 449 aaPredicted RBP12.15□□□□□ -0.46
MDC1-209ENST00000613547 NTNG1Q9Y2I2 539 aa12.15□□□□□ -0.46
MDC1-209ENST00000613547 KCNE3Q9Y6H6 103 aa12.15□□□□□ -0.46
MDC1-209ENST00000613547 FAM166BA8MTA8 275 aa12.14□□□□□ -0.47
MDC1-209ENST00000613547 HMGN4O00479 90 aa12.14□□□□□ -0.47
MDC1-209ENST00000613547 SCDO00767 359 aa12.14□□□□□ -0.47
MDC1-209ENST00000613547 MRASO14807 208 aa12.14□□□□□ -0.47
MDC1-209ENST00000613547 SCO2O43819 266 aa12.14□□□□□ -0.47
MDC1-209ENST00000613547 TRIM3O75382 744 aaPredicted RBP12.14□□□□□ -0.47
MDC1-209ENST00000613547 NPPAP01160 153 aa12.14□□□□□ -0.47
MDC1-209ENST00000613547 RFC3P40938 356 aa12.14□□□□□ -0.47
MDC1-209ENST00000613547 FOXO1Q12778 655 aa12.14□□□□□ -0.47
MDC1-209ENST00000613547 RGNQ15493 299 aa12.14□□□□□ -0.47
MDC1-209ENST00000613547 GRAMD1BQ3KR37 738 aa12.14□□□□□ -0.47
MDC1-209ENST00000613547 ARHGAP11BQ3KRB8 267 aa12.14□□□□□ -0.47
MDC1-209ENST00000613547 FLYWCH1Q4VC44 716 aa12.14□□□□□ -0.47
MDC1-209ENST00000613547 GPAT3Q53EU6 434 aa12.14□□□□□ -0.47
MDC1-209ENST00000613547 KRTCAP3Q53RY4 240 aa12.14□□□□□ -0.47
MDC1-209ENST00000613547 BICRALQ6AI39 1079 aa12.14□□□□□ -0.47
MDC1-209ENST00000613547 DESI1Q6ICB0 168 aa12.14□□□□□ -0.47
MDC1-209ENST00000613547 HEPHL1Q6MZM0 1159 aa12.14□□□□□ -0.47
MDC1-209ENST00000613547 GALNT10Q86SR1 603 aa12.14□□□□□ -0.47
MDC1-209ENST00000613547 OR1J4Q8NGS1 313 aa12.14□□□□□ -0.47
MDC1-209ENST00000613547 CMTM5Q96DZ9 223 aa12.14□□□□□ -0.47
MDC1-209ENST00000613547 LRRC37BQ96QE4 947 aa12.14□□□□□ -0.47
MDC1-209ENST00000613547 SDF2Q99470 211 aa12.14□□□□□ -0.47
MDC1-209ENST00000613547 BARD1Q99728 777 aaKnown RBP12.14□□□□□ -0.47
MDC1-209ENST00000613547 SLX1AQ9BQ83 275 aa12.14□□□□□ -0.47
MDC1-209ENST00000613547 GID8Q9NWU2 228 aa12.14□□□□□ -0.47
MDC1-209ENST00000613547 SLC25A37Q9NYZ2 338 aa12.14□□□□□ -0.47
MDC1-209ENST00000613547 SLAMF8Q9P0V8 285 aa12.14□□□□□ -0.47
MDC1-209ENST00000613547 P2RX2Q9UBL9 471 aa12.14□□□□□ -0.47
MDC1-209ENST00000613547 WIF1Q9Y5W5 379 aa12.14□□□□□ -0.47
MDC1-209ENST00000613547 PINLYPA6NC86 204 aa12.13□□□□□ -0.47
MDC1-209ENST00000613547 NPIPA5E9PKD4 350 aa12.13□□□□□ -0.47
MDC1-209ENST00000613547 H3BNH8 94 aa12.13□□□□□ -0.47
MDC1-209ENST00000613547 GNB5O14775 395 aa12.13□□□□□ -0.47
MDC1-209ENST00000613547 SNPHO15079 494 aa12.13□□□□□ -0.47
MDC1-209ENST00000613547 FADS1O60427 444 aa12.13□□□□□ -0.47
MDC1-209ENST00000613547 GLSO94925 669 aaPredicted RBP12.13□□□□□ -0.47
MDC1-209ENST00000613547 GUSBP08236 651 aa12.13□□□□□ -0.47
MDC1-209ENST00000613547 NR2F1P10589 423 aa12.13□□□□□ -0.47
MDC1-209ENST00000613547 COX4I1P13073 169 aa12.13□□□□□ -0.47
MDC1-209ENST00000613547 ETFAP13804 333 aa12.13□□□□□ -0.47
MDC1-209ENST00000613547 EDN3P14138 238 aa12.13□□□□□ -0.47
MDC1-209ENST00000613547 CD1EP15812 388 aa12.13□□□□□ -0.47
MDC1-209ENST00000613547 HOXB9P17482 250 aaPredicted RBP12.13□□□□□ -0.47
MDC1-209ENST00000613547 TBXA2RP21731 343 aa12.13□□□□□ -0.47
MDC1-209ENST00000613547 DCTP40126 519 aa12.13□□□□□ -0.47
MDC1-209ENST00000613547 DSTNP60981 165 aa12.13□□□□□ -0.47
MDC1-209ENST00000613547 ELOAQ14241 798 aaKnown RBP12.13□□□□□ -0.47
MDC1-209ENST00000613547 HYAL4Q2M3T9 481 aa12.13□□□□□ -0.47
MDC1-209ENST00000613547 TRMT5Q32P41 509 aaKnown RBP12.13□□□□□ -0.47
MDC1-209ENST00000613547 COX20Q5RI15 118 aa12.13□□□□□ -0.47
MDC1-209ENST00000613547 ZNF324BQ6AW86 544 aaPredicted RBP12.13□□□□□ -0.47
MDC1-209ENST00000613547 TIGD3Q6B0B8 471 aa12.13□□□□□ -0.47
MDC1-209ENST00000613547 DLEU7Q6UYE1 221 aa12.13□□□□□ -0.47
MDC1-209ENST00000613547 RETREG3Q86VR2 466 aa12.13□□□□□ -0.47
MDC1-209ENST00000613547 MISPQ8IVT2 679 aa12.13□□□□□ -0.47
MDC1-209ENST00000613547 FAM109AQ8N4B1 249 aa12.13□□□□□ -0.47
MDC1-209ENST00000613547 ANKS4BQ8N8V4 417 aa12.13□□□□□ -0.47
MDC1-209ENST00000613547 CCDC197Q8NCU1 140 aa12.13□□□□□ -0.47
MDC1-209ENST00000613547 GALNT11Q8NCW6 608 aa12.13□□□□□ -0.47
MDC1-209ENST00000613547 OR4C3Q8NH37 302 aa12.13□□□□□ -0.47
MDC1-209ENST00000613547 RNF138Q8WVD3 245 aa12.13□□□□□ -0.47
MDC1-209ENST00000613547 OIT3Q8WWZ8 545 aa12.13□□□□□ -0.47
MDC1-209ENST00000613547 PMM1Q92871 262 aa12.13□□□□□ -0.47
MDC1-209ENST00000613547 ROPN1LQ96C74 230 aa12.13□□□□□ -0.47
MDC1-209ENST00000613547 TRNT1Q96Q11 434 aaKnown RBP12.13□□□□□ -0.47
MDC1-209ENST00000613547 CGREF1Q99674 301 aa12.13□□□□□ -0.47
MDC1-209ENST00000613547 SH3GL1Q99961 368 aa12.13□□□□□ -0.47
MDC1-209ENST00000613547 THUMPD3Q9BV44 507 aaKnown RBP12.13□□□□□ -0.47
MDC1-209ENST00000613547 ZNF350Q9GZX5 532 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms