RNA–Protein interactions for RNA: ENST00000610623.4

TP53-220, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-220ENST00000610623 TMPRSS13Q9BYE2 586 aa11.21□□□□□ -0.62
TP53-220ENST00000610623 REEP4Q9H6H4 257 aa11.21□□□□□ -0.62
TP53-220ENST00000610623 FANCFQ9NPI8 374 aa11.21□□□□□ -0.62
TP53-220ENST00000610623 GKN1Q9NS71 199 aa11.21□□□□□ -0.62
TP53-220ENST00000610623 CRLS1Q9UJA2 301 aa11.21□□□□□ -0.62
TP53-220ENST00000610623 ACAD8Q9UKU7 415 aa11.21□□□□□ -0.62
TP53-220ENST00000610623 CDV3Q9UKY7 258 aaKnown RBP11.21□□□□□ -0.62
TP53-220ENST00000610623 KCNK7Q9Y2U2 307 aa11.21□□□□□ -0.62
TP53-220ENST00000610623 NOSIPQ9Y314 301 aaKnown RBP11.21□□□□□ -0.62
TP53-220ENST00000610623 C2orf92A0A1B0GVN3 265 aa11.2□□□□□ -0.62
TP53-220ENST00000610623 CD8B2A6NJW9 211 aa11.2□□□□□ -0.62
TP53-220ENST00000610623 H0YIV9 168 aa11.2□□□□□ -0.62
TP53-220ENST00000610623 ZNF593O00488 134 aaPredicted RBP11.2□□□□□ -0.62
TP53-220ENST00000610623 SIGLEC6O43699 453 aa11.2□□□□□ -0.62
TP53-220ENST00000610623 NME6O75414 186 aaPredicted RBP11.2□□□□□ -0.62
TP53-220ENST00000610623 ITGA10O75578 1167 aa11.2□□□□□ -0.62
TP53-220ENST00000610623 PRAMEF12O95522 483 aa11.2□□□□□ -0.62
TP53-220ENST00000610623 FCER2P06734 321 aa11.2□□□□□ -0.62
TP53-220ENST00000610623 OR12D1P0DN82 309 aa11.2□□□□□ -0.62
TP53-220ENST00000610623 CD8BP10966 210 aa11.2□□□□□ -0.62
TP53-220ENST00000610623 NFYAP23511 347 aaPredicted RBP11.2□□□□□ -0.62
TP53-220ENST00000610623 SOX18P35713 384 aa11.2□□□□□ -0.62
TP53-220ENST00000610623 MMP15P51511 669 aa11.2□□□□□ -0.62
TP53-220ENST00000610623 RPS7P62081 194 aaKnown RBP11.2□□□□□ -0.62
TP53-220ENST00000610623 BCL2L1Q07817 233 aa11.2□□□□□ -0.62
TP53-220ENST00000610623 SP140Q13342 867 aa11.2□□□□□ -0.62
TP53-220ENST00000610623 GRIN2CQ14957 1233 aa11.2□□□□□ -0.62
TP53-220ENST00000610623 ZNF385BQ569K4 471 aa11.2□□□□□ -0.62
TP53-220ENST00000610623 PABPC1L2AQ5JQF8 200 aa11.2□□□□□ -0.62
TP53-220ENST00000610623 SIAH3Q8IW03 269 aa11.2□□□□□ -0.62
TP53-220ENST00000610623 SLITRK4Q8IW52 837 aa11.2□□□□□ -0.62
TP53-220ENST00000610623 LRRC56Q8IYG6 542 aaPredicted RBP11.2□□□□□ -0.62
TP53-220ENST00000610623 GPR26Q8NDV2 337 aa11.2□□□□□ -0.62
TP53-220ENST00000610623 BEST4Q8NFU0 473 aa11.2□□□□□ -0.62
TP53-220ENST00000610623 OR4K1Q8NGD4 311 aa11.2□□□□□ -0.62
TP53-220ENST00000610623 ASB11Q8WXH4 323 aa11.2□□□□□ -0.62
TP53-220ENST00000610623 ASIC4Q96FT7 647 aa11.2□□□□□ -0.62
TP53-220ENST00000610623 LCORQ96JN0 433 aaPredicted RBP11.2□□□□□ -0.62
TP53-220ENST00000610623 FERD3LQ96RJ6 166 aa11.2□□□□□ -0.62
TP53-220ENST00000610623 DDOQ99489 341 aa11.2□□□□□ -0.62
TP53-220ENST00000610623 TTYH1Q9H313 450 aaPredicted RBP11.2□□□□□ -0.62
TP53-220ENST00000610623 INSL5Q9Y5Q6 135 aa11.2□□□□□ -0.62
TP53-220ENST00000610623 GNG14A0A1W2PPG7 69 aa11.2□□□□□ -0.62
TP53-220ENST00000610623 F8W036 122 aa11.2□□□□□ -0.62
TP53-220ENST00000610623 LGALS8O00214 317 aa11.2□□□□□ -0.62
TP53-220ENST00000610623 SLC16A5O15375 505 aa11.2□□□□□ -0.62
TP53-220ENST00000610623 RGS11O94810 467 aa11.2□□□□□ -0.62
TP53-220ENST00000610623 ADRB1P08588 477 aa11.2□□□□□ -0.62
TP53-220ENST00000610623 CD22P20273 847 aa11.2□□□□□ -0.62
TP53-220ENST00000610623 TIA1P31483 386 aaKnown RBP eCLIP11.2□□□□□ -0.62
TP53-220ENST00000610623 PPM1AP35813 382 aa11.2□□□□□ -0.62
TP53-220ENST00000610623 RPL3P39023 403 aaKnown RBP11.2□□□□□ -0.62
TP53-220ENST00000610623 NSG1P42857 185 aa11.2□□□□□ -0.62
TP53-220ENST00000610623 SGSHP51688 502 aa11.2□□□□□ -0.62
TP53-220ENST00000610623 PITPNAQ00169 270 aa11.2□□□□□ -0.62
TP53-220ENST00000610623 ZNF155Q12901 538 aaPredicted RBP11.2□□□□□ -0.62
TP53-220ENST00000610623 DYRK1AQ13627 763 aa11.2□□□□□ -0.62
TP53-220ENST00000610623 DDX39BQ13838 428 aaKnown RBP11.2□□□□□ -0.62
TP53-220ENST00000610623 EOGTQ5NDL2 527 aa11.2□□□□□ -0.62
TP53-220ENST00000610623 CXorf57Q6NSI4 855 aaKnown RBP11.2□□□□□ -0.62
TP53-220ENST00000610623 C17orf107Q6ZR85 190 aa11.2□□□□□ -0.62
TP53-220ENST00000610623 LHFPL3Q86UP9 236 aa11.2□□□□□ -0.62
TP53-220ENST00000610623 MCATQ8IVS2 390 aaKnown RBP11.2□□□□□ -0.62
TP53-220ENST00000610623 ADGRG2Q8IZP9 1017 aa11.2□□□□□ -0.62
TP53-220ENST00000610623 KLHL36Q8N4N3 616 aa11.2□□□□□ -0.62
TP53-220ENST00000610623 POGLUT1Q8NBL1 392 aa11.2□□□□□ -0.62
TP53-220ENST00000610623 ZNF784Q8NCA9 323 aaPredicted RBP11.2□□□□□ -0.62
TP53-220ENST00000610623 OR52N1Q8NH53 320 aa11.2□□□□□ -0.62
TP53-220ENST00000610623 SLC7A13Q8TCU3 470 aa11.2□□□□□ -0.62
TP53-220ENST00000610623 ELMOD3Q96FG2 381 aa11.2□□□□□ -0.62
TP53-220ENST00000610623 FN3KQ9H479 309 aa11.2□□□□□ -0.62
TP53-220ENST00000610623 IL26Q9NPH9 171 aa11.2□□□□□ -0.62
TP53-220ENST00000610623 FBXW2Q9UKT8 454 aa11.2□□□□□ -0.62
TP53-220ENST00000610623 PCNTO95613 3336 aa11.2□□□□□ -0.62
TP53-220ENST00000610623 PIKFYVEQ9Y2I7 2098 aa11.19□□□□□ -0.62
TP53-220ENST00000610623 A6NJY4 79 aa11.19□□□□□ -0.62
TP53-220ENST00000610623 SEMA7AO75326 666 aa11.19□□□□□ -0.62
TP53-220ENST00000610623 RGS9O75916 674 aaPredicted RBP11.19□□□□□ -0.62
TP53-220ENST00000610623 PLATP00750 562 aa11.19□□□□□ -0.62
TP53-220ENST00000610623 APOC1P02654 83 aa11.19□□□□□ -0.62
TP53-220ENST00000610623 TFP02787 698 aa11.19□□□□□ -0.62
TP53-220ENST00000610623 HPXP02790 462 aa11.19□□□□□ -0.62
TP53-220ENST00000610623 ALDOBP05062 364 aa11.19□□□□□ -0.62
TP53-220ENST00000610623 CLTBP09497 229 aa11.19□□□□□ -0.62
TP53-220ENST00000610623 TYRP14679 529 aa11.19□□□□□ -0.62
TP53-220ENST00000610623 CXCL2P19875 107 aa11.19□□□□□ -0.62
TP53-220ENST00000610623 CD79BP40259 229 aa11.19□□□□□ -0.62
TP53-220ENST00000610623 CCR6P51684 374 aa11.19□□□□□ -0.62
TP53-220ENST00000610623 PFN3P60673 137 aa11.19□□□□□ -0.62
TP53-220ENST00000610623 RAB8AP61006 207 aa11.19□□□□□ -0.62
TP53-220ENST00000610623 MPP7Q5T2T1 576 aa11.19□□□□□ -0.62
TP53-220ENST00000610623 NR2C2APQ86WQ0 139 aa11.19□□□□□ -0.62
TP53-220ENST00000610623 SPICQ8N5J4 248 aa11.19□□□□□ -0.62
TP53-220ENST00000610623 BMPERQ8N8U9 685 aa11.19□□□□□ -0.62
TP53-220ENST00000610623 ZNF527Q8NB42 609 aa11.19□□□□□ -0.62
TP53-220ENST00000610623 FBXO15Q8NCQ5 510 aaPredicted RBP11.19□□□□□ -0.62
TP53-220ENST00000610623 OR8K3Q8NH51 312 aa11.19□□□□□ -0.62
TP53-220ENST00000610623 COQ8AQ8NI60 647 aa11.19□□□□□ -0.62
TP53-220ENST00000610623 VWCEQ96DN2 955 aa11.19□□□□□ -0.62
TP53-220ENST00000610623 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms