RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 CXCL3P19876 107 aa19.12■□□□□ 0.65
SSBP3-216ENST00000610401 PCBP4P57723 403 aaKnown RBP19.12■□□□□ 0.65
SSBP3-216ENST00000610401 FGFBP1Q14512 234 aa19.12■□□□□ 0.65
SSBP3-216ENST00000610401 AGERQ15109 404 aa19.12■□□□□ 0.65
SSBP3-216ENST00000610401 GPR135Q8IZ08 494 aa19.12■□□□□ 0.65
SSBP3-216ENST00000610401 LINC01555Q8NAE3 123 aa19.12■□□□□ 0.65
SSBP3-216ENST00000610401 MS4A3Q96HJ5 214 aa19.12■□□□□ 0.65
SSBP3-216ENST00000610401 MED28Q9H204 178 aa19.12■□□□□ 0.65
SSBP3-216ENST00000610401 J3QLW9 94 aa19.12■□□□□ 0.65
SSBP3-216ENST00000610401 RHOP08100 348 aa19.12■□□□□ 0.65
SSBP3-216ENST00000610401 ZNF19P17023 458 aa19.12■□□□□ 0.65
SSBP3-216ENST00000610401 NTSP30990 170 aa19.12■□□□□ 0.65
SSBP3-216ENST00000610401 GAS1P54826 345 aa19.12■□□□□ 0.65
SSBP3-216ENST00000610401 DCDC1P59894 354 aa19.12■□□□□ 0.65
SSBP3-216ENST00000610401 TGM3Q08188 693 aa19.12■□□□□ 0.65
SSBP3-216ENST00000610401 RAB40BQ12829 278 aa19.12■□□□□ 0.65
SSBP3-216ENST00000610401 MAB21L1Q13394 359 aa19.12■□□□□ 0.65
SSBP3-216ENST00000610401 OR51A7Q8NH64 312 aa19.12■□□□□ 0.65
SSBP3-216ENST00000610401 ORAI3Q9BRQ5 295 aa19.12■□□□□ 0.65
SSBP3-216ENST00000610401 TMEM43Q9BTV4 400 aa19.12■□□□□ 0.65
SSBP3-216ENST00000610401 SPINT1O43278 529 aa19.11■□□□□ 0.65
SSBP3-216ENST00000610401 ERVFC1P60507 584 aa19.11■□□□□ 0.65
SSBP3-216ENST00000610401 RPL6Q02878 288 aaKnown RBP19.11■□□□□ 0.65
SSBP3-216ENST00000610401 COX10Q12887 443 aa19.11■□□□□ 0.65
SSBP3-216ENST00000610401 C3orf38Q5JPI3 329 aa19.11■□□□□ 0.65
SSBP3-216ENST00000610401 ENTPD8Q5MY95 495 aa19.11■□□□□ 0.65
SSBP3-216ENST00000610401 OR4C11Q6IEV9 310 aa19.11■□□□□ 0.65
SSBP3-216ENST00000610401 THAP7Q9BT49 309 aaPredicted RBP19.11■□□□□ 0.65
SSBP3-216ENST00000610401 C1QTNF6Q9BXI9 259 aa19.11■□□□□ 0.65
SSBP3-216ENST00000610401 TMEM245Q9H330 911 aa19.11■□□□□ 0.65
SSBP3-216ENST00000610401 EVA1BQ9NVM1 165 aa19.11■□□□□ 0.65
SSBP3-216ENST00000610401 IGLON5A6NGN9 336 aa19.11■□□□□ 0.65
SSBP3-216ENST00000610401 ZNF860A6NHJ4 632 aa19.11■□□□□ 0.65
SSBP3-216ENST00000610401 HLA-DPB1P04440 258 aa19.11■□□□□ 0.65
SSBP3-216ENST00000610401 CSF2RAP15509 400 aa19.11■□□□□ 0.65
SSBP3-216ENST00000610401 ACADLP28330 430 aa19.11■□□□□ 0.65
SSBP3-216ENST00000610401 BNC1Q01954 994 aa19.11■□□□□ 0.65
SSBP3-216ENST00000610401 CLPPQ16740 277 aaPredicted RBP19.11■□□□□ 0.65
SSBP3-216ENST00000610401 TMEM91Q6ZNR0 172 aa19.11■□□□□ 0.65
SSBP3-216ENST00000610401 KLHL36Q8N4N3 616 aa19.11■□□□□ 0.65
SSBP3-216ENST00000610401 MCHR1Q99705 422 aa19.11■□□□□ 0.65
SSBP3-216ENST00000610401 DPCDQ9BVM2 203 aaPredicted RBP19.11■□□□□ 0.65
SSBP3-216ENST00000610401 SAGE1Q9NXZ1 904 aa19.11■□□□□ 0.65
SSBP3-216ENST00000610401 SLC7A7Q9UM01 511 aa19.11■□□□□ 0.65
SSBP3-216ENST00000610401 NCKAP1Q9Y2A7 1128 aa19.11■□□□□ 0.65
SSBP3-216ENST00000610401 TRPM6Q9BX84 2022 aa19.1■□□□□ 0.65
SSBP3-216ENST00000610401 A0A1W2PR48 441 aa19.1■□□□□ 0.65
SSBP3-216ENST00000610401 LGI1O95970 557 aa19.1■□□□□ 0.65
SSBP3-216ENST00000610401 PAK4O96013 591 aaPredicted RBP19.1■□□□□ 0.65
SSBP3-216ENST00000610401 E2F1Q01094 437 aa19.1■□□□□ 0.65
SSBP3-216ENST00000610401 ELOAQ14241 798 aaKnown RBP19.1■□□□□ 0.65
SSBP3-216ENST00000610401 SLC25A35Q3KQZ1 300 aa19.1■□□□□ 0.65
SSBP3-216ENST00000610401 C1orf94Q6P1W5 598 aa19.1■□□□□ 0.65
SSBP3-216ENST00000610401 ZC3H14Q6PJT7 736 aaKnown RBP19.1■□□□□ 0.65
SSBP3-216ENST00000610401 PRR23CQ6ZRP0 262 aa19.1■□□□□ 0.65
SSBP3-216ENST00000610401 SLC16A11Q8NCK7 471 aa19.1■□□□□ 0.65
SSBP3-216ENST00000610401 ZNF431Q8TF32 576 aaPredicted RBP19.1■□□□□ 0.65
SSBP3-216ENST00000610401 PRRC1Q96M27 445 aa19.1■□□□□ 0.65
SSBP3-216ENST00000610401 AICDAQ9GZX7 198 aa19.1■□□□□ 0.65
SSBP3-216ENST00000610401 OTOL1A6NHN0 477 aaPredicted RBP19.1■□□□□ 0.65
SSBP3-216ENST00000610401 PRG2P13727 222 aa19.1■□□□□ 0.65
SSBP3-216ENST00000610401 PDX1P52945 283 aa19.1■□□□□ 0.65
SSBP3-216ENST00000610401 ZNF155Q12901 538 aaPredicted RBP19.1■□□□□ 0.65
SSBP3-216ENST00000610401 TPBGQ13641 420 aa19.1■□□□□ 0.65
SSBP3-216ENST00000610401 ZCCHC10Q8TBK6 192 aa19.1■□□□□ 0.65
SSBP3-216ENST00000610401 AKAP1Q92667 903 aaKnown RBP eCLIP19.1■□□□□ 0.65
SSBP3-216ENST00000610401 OR52A5Q9H2C5 316 aa19.1■□□□□ 0.65
SSBP3-216ENST00000610401 EFEMP2O95967 443 aa19.09■□□□□ 0.65
SSBP3-216ENST00000610401 GIFP27352 417 aa19.09■□□□□ 0.65
SSBP3-216ENST00000610401 TALDO1P37837 337 aa19.09■□□□□ 0.65
SSBP3-216ENST00000610401 HOMEZQ8IX15 550 aa19.09■□□□□ 0.65
SSBP3-216ENST00000610401 PXYLP1Q8TE99 480 aa19.09■□□□□ 0.65
SSBP3-216ENST00000610401 MCOLN1Q9GZU1 580 aa19.09■□□□□ 0.65
SSBP3-216ENST00000610401 ICKQ9UPZ9 632 aa19.09■□□□□ 0.65
SSBP3-216ENST00000610401 I3L521 148 aa19.09■□□□□ 0.65
SSBP3-216ENST00000610401 SLC35G4P0C7Q5 338 aa19.09■□□□□ 0.65
SSBP3-216ENST00000610401 MAT2AP31153 395 aaKnown RBP19.09■□□□□ 0.65
SSBP3-216ENST00000610401 MAGEB1P43366 347 aa19.09■□□□□ 0.65
SSBP3-216ENST00000610401 TAS2R38P59533 333 aa19.09■□□□□ 0.65
SSBP3-216ENST00000610401 IKBIPQ70UQ0 350 aa19.09■□□□□ 0.65
SSBP3-216ENST00000610401 RD3Q7Z3Z2 195 aa19.09■□□□□ 0.65
SSBP3-216ENST00000610401 PFN4Q8NHR9 129 aa19.09■□□□□ 0.65
SSBP3-216ENST00000610401 PIGXQ8TBF5 258 aa19.09■□□□□ 0.65
SSBP3-216ENST00000610401 ABHD1Q96SE0 405 aa19.09■□□□□ 0.65
SSBP3-216ENST00000610401 MKRN2Q9H000 416 aaKnown RBP19.09■□□□□ 0.65
SSBP3-216ENST00000610401 SYNPO2LQ9H987 977 aa19.09■□□□□ 0.65
SSBP3-216ENST00000610401 ARRDC5A6NEK1 342 aa19.09■□□□□ 0.65
SSBP3-216ENST00000610401 SNTNA6NMZ2 147 aa19.09■□□□□ 0.65
SSBP3-216ENST00000610401 HRGP04196 525 aa19.09■□□□□ 0.65
SSBP3-216ENST00000610401 ACADMP11310 421 aa19.09■□□□□ 0.65
SSBP3-216ENST00000610401 ENPP1P22413 925 aa19.09■□□□□ 0.65
SSBP3-216ENST00000610401 TM4SF4P48230 202 aa19.09■□□□□ 0.65
SSBP3-216ENST00000610401 ADAM15Q13444 863 aa19.09■□□□□ 0.65
SSBP3-216ENST00000610401 MINDY4Q4G0A6 757 aa19.09■□□□□ 0.65
SSBP3-216ENST00000610401 DCUN1D3Q8IWE4 304 aa19.09■□□□□ 0.65
SSBP3-216ENST00000610401 KLHDC8AQ8IYD2 350 aa19.09■□□□□ 0.65
SSBP3-216ENST00000610401 ARL14Q8N4G2 192 aa19.09■□□□□ 0.65
SSBP3-216ENST00000610401 C12orf76Q8N812 135 aaPredicted RBP19.09■□□□□ 0.65
SSBP3-216ENST00000610401 OR7D2Q96RA2 312 aa19.09■□□□□ 0.65
SSBP3-216ENST00000610401 NARFLQ9H6Q4 476 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms