RNA–Protein interactions for RNA: ENST00000608532.1

HDDC2-207, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 553 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-207ENST00000608532 NDUFAF3Q9BU61 184 aa2.75□□□□□ -1.97
HDDC2-207ENST00000608532 TEX13AQ9BXU3 409 aaPredicted RBP2.75□□□□□ -1.97
HDDC2-207ENST00000608532 SLC25A39Q9BZJ4 359 aaPredicted RBP2.75□□□□□ -1.97
HDDC2-207ENST00000608532 DDX47Q9H0S4 455 aaKnown RBP2.75□□□□□ -1.97
HDDC2-207ENST00000608532 HOMER3Q9NSC5 361 aa2.75□□□□□ -1.97
HDDC2-207ENST00000608532 COMMD8Q9NX08 183 aa2.75□□□□□ -1.97
HDDC2-207ENST00000608532 L3MBTL1Q9Y468 752 aa2.75□□□□□ -1.97
HDDC2-207ENST00000608532 ZMYM6O95789 1325 aa2.74□□□□□ -1.97
HDDC2-207ENST00000608532 RAI1Q7Z5J4 1906 aaPredicted RBP2.74□□□□□ -1.97
HDDC2-207ENST00000608532 RAD54L2Q9Y4B4 1467 aa2.74□□□□□ -1.97
HDDC2-207ENST00000608532 IMPA2O14732 288 aa2.74□□□□□ -1.97
HDDC2-207ENST00000608532 GOSR1O95249 250 aa2.74□□□□□ -1.97
HDDC2-207ENST00000608532 CXCL14O95715 111 aa2.74□□□□□ -1.97
HDDC2-207ENST00000608532 SEMG1P04279 462 aa2.74□□□□□ -1.97
HDDC2-207ENST00000608532 ALOX5P09917 674 aa2.74□□□□□ -1.97
HDDC2-207ENST00000608532 OR8U8P0C7N1 319 aa2.74□□□□□ -1.97
HDDC2-207ENST00000608532 SLC35G4P0C7Q5 338 aa2.74□□□□□ -1.97
HDDC2-207ENST00000608532 CCNA2P20248 432 aa2.74□□□□□ -1.97
HDDC2-207ENST00000608532 SRP54P61011 504 aaKnown RBP2.74□□□□□ -1.97
HDDC2-207ENST00000608532 OC90Q02509 493 aaPredicted RBP2.74□□□□□ -1.97
HDDC2-207ENST00000608532 PKN2Q16513 984 aaKnown RBP2.74□□□□□ -1.97
HDDC2-207ENST00000608532 ACSF3Q4G176 576 aaPredicted RBP2.74□□□□□ -1.97
HDDC2-207ENST00000608532 TFDP3Q5H9I0 405 aa2.74□□□□□ -1.97
HDDC2-207ENST00000608532 DCST2Q5T1A1 773 aa2.74□□□□□ -1.97
HDDC2-207ENST00000608532 LCE1CQ5T751 118 aa2.74□□□□□ -1.97
HDDC2-207ENST00000608532 LCE1BQ5T7P3 118 aa2.74□□□□□ -1.97
HDDC2-207ENST00000608532 METTL11BQ5VVY1 283 aa2.74□□□□□ -1.97
HDDC2-207ENST00000608532 DLEU7Q6UYE1 221 aa2.74□□□□□ -1.97
HDDC2-207ENST00000608532 ZNF589Q86UQ0 364 aaPredicted RBP2.74□□□□□ -1.97
HDDC2-207ENST00000608532 UNC45BQ8IWX7 931 aa2.74□□□□□ -1.97
HDDC2-207ENST00000608532 ALLCQ8N6M5 410 aa2.74□□□□□ -1.97
HDDC2-207ENST00000608532 SNX21Q969T3 373 aa2.74□□□□□ -1.97
HDDC2-207ENST00000608532 HAVCR1Q96D42 359 aa2.74□□□□□ -1.97
HDDC2-207ENST00000608532 STARD4Q96DR4 205 aa2.74□□□□□ -1.97
HDDC2-207ENST00000608532 SPATA13Q96N96 652 aa2.74□□□□□ -1.97
HDDC2-207ENST00000608532 SMIM14Q96QK8 99 aa2.74□□□□□ -1.97
HDDC2-207ENST00000608532 NAP1L3Q99457 506 aaPredicted RBP2.74□□□□□ -1.97
HDDC2-207ENST00000608532 COQ7Q99807 217 aa2.74□□□□□ -1.97
HDDC2-207ENST00000608532 MARCH5Q9NX47 278 aa2.74□□□□□ -1.97
HDDC2-207ENST00000608532 EXOSC1Q9Y3B2 195 aaKnown RBP2.74□□□□□ -1.97
HDDC2-207ENST00000608532 CDC42BPBQ9Y5S2 1711 aa2.73□□□□□ -1.97
HDDC2-207ENST00000608532 IGLV3-16A0A075B6K0 115 aa2.73□□□□□ -1.97
HDDC2-207ENST00000608532 IGKV6-21A0A0C4DH24 114 aa2.73□□□□□ -1.97
HDDC2-207ENST00000608532 SCRG1O75711 98 aa2.73□□□□□ -1.97
HDDC2-207ENST00000608532 TIMP1P01033 207 aa2.73□□□□□ -1.97
HDDC2-207ENST00000608532 JCHAINP01591 159 aa2.73□□□□□ -1.97
HDDC2-207ENST00000608532 STSP08842 583 aa2.73□□□□□ -1.97
HDDC2-207ENST00000608532 ADORA2BP29275 332 aa2.73□□□□□ -1.97
HDDC2-207ENST00000608532 DHPSP49366 369 aaPredicted RBP2.73□□□□□ -1.97
HDDC2-207ENST00000608532 OTUD4Q01804 1114 aaKnown RBP2.73□□□□□ -1.97
HDDC2-207ENST00000608532 ZP4Q12836 540 aa2.73□□□□□ -1.97
HDDC2-207ENST00000608532 DPYSL3Q14195 570 aa2.73□□□□□ -1.97
HDDC2-207ENST00000608532 KARSQ15046 597 aaKnown RBP2.73□□□□□ -1.97
HDDC2-207ENST00000608532 MPPED2Q15777 294 aa2.73□□□□□ -1.97
HDDC2-207ENST00000608532 ZNF630Q2M218 657 aaPredicted RBP2.73□□□□□ -1.97
HDDC2-207ENST00000608532 BTNL3Q6UXE8 466 aa2.73□□□□□ -1.97
HDDC2-207ENST00000608532 CCDC36Q8IYA8 594 aa2.73□□□□□ -1.97
HDDC2-207ENST00000608532 FGGYQ96C11 551 aa2.73□□□□□ -1.97
HDDC2-207ENST00000608532 TMEM80Q96HE8 168 aa2.73□□□□□ -1.97
HDDC2-207ENST00000608532 RBM28Q9NW13 759 aaKnown RBP2.73□□□□□ -1.97
HDDC2-207ENST00000608532 CD274Q9NZQ7 290 aa2.73□□□□□ -1.97
HDDC2-207ENST00000608532 ONECUT1Q9UBC0 465 aa2.73□□□□□ -1.97
HDDC2-207ENST00000608532 TDRKHQ9Y2W6 561 aaKnown RBP2.73□□□□□ -1.97
HDDC2-207ENST00000608532 TTC26A0AVF1 554 aa2.72□□□□□ -1.97
HDDC2-207ENST00000608532 TUBAL3A6NHL2 446 aa2.72□□□□□ -1.97
HDDC2-207ENST00000608532 SAGE2PA6NJ88 616 aa2.72□□□□□ -1.97
HDDC2-207ENST00000608532 USP27XA6NNY8 438 aa2.72□□□□□ -1.97
HDDC2-207ENST00000608532 C19orf81C9J6K1 198 aa2.72□□□□□ -1.97
HDDC2-207ENST00000608532 CD55P08174 381 aa2.72□□□□□ -1.97
HDDC2-207ENST00000608532 TOP1P11387 765 aaKnown RBP2.72□□□□□ -1.97
HDDC2-207ENST00000608532 PPOXP50336 477 aa2.72□□□□□ -1.97
HDDC2-207ENST00000608532 GPC3P51654 580 aa2.72□□□□□ -1.97
HDDC2-207ENST00000608532 HERVK_113P63132 956 aa2.72□□□□□ -1.97
HDDC2-207ENST00000608532 ERVK-8P63133 956 aa2.72□□□□□ -1.97
HDDC2-207ENST00000608532 MRPS6P82932 125 aaKnown RBP2.72□□□□□ -1.97
HDDC2-207ENST00000608532 EOGTQ5NDL2 527 aa2.72□□□□□ -1.97
HDDC2-207ENST00000608532 LEG1Q6P5S2 330 aa2.72□□□□□ -1.97
HDDC2-207ENST00000608532 ARFGAP2Q8N6H7 521 aa2.72□□□□□ -1.97
HDDC2-207ENST00000608532 TMEM185AQ8NFB2 350 aa2.72□□□□□ -1.97
HDDC2-207ENST00000608532 ARNTL2Q8WYA1 636 aa2.72□□□□□ -1.97
HDDC2-207ENST00000608532 VMP1Q96GC9 406 aa2.72□□□□□ -1.97
HDDC2-207ENST00000608532 ERVK-6Q9BXR3 956 aa2.72□□□□□ -1.97
HDDC2-207ENST00000608532 SIRPDQ9H106 197 aa2.72□□□□□ -1.97
HDDC2-207ENST00000608532 CYTL1Q9NRR1 136 aa2.72□□□□□ -1.97
HDDC2-207ENST00000608532 GDAP2Q9NXN4 497 aa2.72□□□□□ -1.97
HDDC2-207ENST00000608532 RAB26Q9ULW5 256 aa2.72□□□□□ -1.97
HDDC2-207ENST00000608532 ARID1AO14497 2285 aa2.71□□□□□ -1.98
HDDC2-207ENST00000608532 A0A1B0GUA9 196 aa2.71□□□□□ -1.98
HDDC2-207ENST00000608532 CASKO14936 926 aa2.71□□□□□ -1.98
HDDC2-207ENST00000608532 RAMP1O60894 148 aa2.71□□□□□ -1.98
HDDC2-207ENST00000608532 SUPT7LO94864 414 aa2.71□□□□□ -1.98
HDDC2-207ENST00000608532 ABHD2P08910 425 aa2.71□□□□□ -1.98
HDDC2-207ENST00000608532 TSPAN8P19075 237 aa2.71□□□□□ -1.98
HDDC2-207ENST00000608532 CD1BP29016 333 aa2.71□□□□□ -1.98
HDDC2-207ENST00000608532 RPL4P36578 427 aaKnown RBP2.71□□□□□ -1.98
HDDC2-207ENST00000608532 RPL29P47914 159 aaKnown RBP2.71□□□□□ -1.98
HDDC2-207ENST00000608532 SLC6A8P48029 635 aa2.71□□□□□ -1.98
HDDC2-207ENST00000608532 EMDP50402 254 aa2.71□□□□□ -1.98
HDDC2-207ENST00000608532 MYBPC1Q00872 1141 aa2.71□□□□□ -1.98
HDDC2-207ENST00000608532 EBI3Q14213 229 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms