RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 TRPC5OSA6NMA1 111 aa13.12□□□□□ -0.31
TUBE1-208ENST00000604743 HDAC3O15379 428 aa13.12□□□□□ -0.31
TUBE1-208ENST00000604743 GMFGO60234 142 aa13.12□□□□□ -0.31
TUBE1-208ENST00000604743 FADS1O60427 444 aa13.12□□□□□ -0.31
TUBE1-208ENST00000604743 WDR1O75083 606 aa13.12□□□□□ -0.31
TUBE1-208ENST00000604743 HMGN2P05204 90 aaKnown RBP13.12□□□□□ -0.31
TUBE1-208ENST00000604743 SNRPB2P08579 225 aaKnown RBP13.12□□□□□ -0.31
TUBE1-208ENST00000604743 BMP7P18075 431 aa13.12□□□□□ -0.31
TUBE1-208ENST00000604743 AGAP20933 346 aa13.12□□□□□ -0.31
TUBE1-208ENST00000604743 EPHA3P29320 983 aa13.12□□□□□ -0.31
TUBE1-208ENST00000604743 CLK3P49761 638 aaKnown RBP13.12□□□□□ -0.31
TUBE1-208ENST00000604743 GAS1P54826 345 aa13.12□□□□□ -0.31
TUBE1-208ENST00000604743 CRYZQ08257 329 aaKnown RBP13.12□□□□□ -0.31
TUBE1-208ENST00000604743 CCNJQ5T5M9 372 aa13.12□□□□□ -0.31
TUBE1-208ENST00000604743 C1orf185Q5T7R7 199 aa13.12□□□□□ -0.31
TUBE1-208ENST00000604743 RTL6Q6ICC9 239 aa13.12□□□□□ -0.31
TUBE1-208ENST00000604743 ACAD11Q709F0 780 aa13.12□□□□□ -0.31
TUBE1-208ENST00000604743 MARCH3Q86UD3 253 aa13.12□□□□□ -0.31
TUBE1-208ENST00000604743 WDR75Q8IWA0 830 aaKnown RBP13.12□□□□□ -0.31
TUBE1-208ENST00000604743 ULK2Q8IYT8 1036 aa13.12□□□□□ -0.31
TUBE1-208ENST00000604743 CLECL1Q8IZS7 167 aa13.12□□□□□ -0.31
TUBE1-208ENST00000604743 COX18Q8N8Q8 333 aa13.12□□□□□ -0.31
TUBE1-208ENST00000604743 RAB3IL1Q8TBN0 382 aa13.12□□□□□ -0.31
TUBE1-208ENST00000604743 ZNF75CPQ92670 426 aaPredicted RBP13.12□□□□□ -0.31
TUBE1-208ENST00000604743 CDS1Q92903 461 aa13.12□□□□□ -0.31
TUBE1-208ENST00000604743 TIMP4Q99727 224 aa13.12□□□□□ -0.31
TUBE1-208ENST00000604743 TTYH2Q9BSA4 534 aa13.12□□□□□ -0.31
TUBE1-208ENST00000604743 UGT2B28Q9BY64 529 aa13.12□□□□□ -0.31
TUBE1-208ENST00000604743 RTN4RQ9BZR6 473 aa13.12□□□□□ -0.31
TUBE1-208ENST00000604743 DSN1Q9H410 356 aa13.12□□□□□ -0.31
TUBE1-208ENST00000604743 MED11Q9P086 117 aa13.12□□□□□ -0.31
TUBE1-208ENST00000604743 RPH3AQ9Y2J0 694 aaPredicted RBP13.12□□□□□ -0.31
TUBE1-208ENST00000604743 KLF2Q9Y5W3 355 aaPredicted RBP13.12□□□□□ -0.31
TUBE1-208ENST00000604743 KIAA1549Q9HCM3 1950 aa13.12□□□□□ -0.31
TUBE1-208ENST00000604743 PKDREJQ9NTG1 2253 aa13.11□□□□□ -0.31
TUBE1-208ENST00000604743 CELSR2Q9HCU4 2923 aa13.11□□□□□ -0.31
TUBE1-208ENST00000604743 FAM90A27PA6NNH2 459 aa13.11□□□□□ -0.31
TUBE1-208ENST00000604743 KCNK2O95069 426 aa13.11□□□□□ -0.31
TUBE1-208ENST00000604743 CPSF4O95639 269 aaKnown RBP13.11□□□□□ -0.31
TUBE1-208ENST00000604743 ALDOCP09972 364 aaKnown RBP13.11□□□□□ -0.31
TUBE1-208ENST00000604743 GLI4P10075 376 aa13.11□□□□□ -0.31
TUBE1-208ENST00000604743 GABRA1P14867 456 aa13.11□□□□□ -0.31
TUBE1-208ENST00000604743 GCKP35557 465 aa13.11□□□□□ -0.31
TUBE1-208ENST00000604743 MAP3K8P41279 467 aa13.11□□□□□ -0.31
TUBE1-208ENST00000604743 C21orf58P58505 322 aa13.11□□□□□ -0.31
TUBE1-208ENST00000604743 HBA1P69905 142 aa13.11□□□□□ -0.31
TUBE1-208ENST00000604743 POU6F2P78424 691 aaPredicted RBP13.11□□□□□ -0.31
TUBE1-208ENST00000604743 OCRLQ01968 901 aa13.11□□□□□ -0.31
TUBE1-208ENST00000604743 ZNF630Q2M218 657 aaPredicted RBP13.11□□□□□ -0.31
TUBE1-208ENST00000604743 GRAMD1BQ3KR37 738 aa13.11□□□□□ -0.31
TUBE1-208ENST00000604743 DCST1Q5T197 706 aa13.11□□□□□ -0.31
TUBE1-208ENST00000604743 VASNQ6EMK4 673 aa13.11□□□□□ -0.31
TUBE1-208ENST00000604743 ZCCHC12Q6PEW1 402 aa13.11□□□□□ -0.31
TUBE1-208ENST00000604743 ANKRD46Q86W74 232 aa13.11□□□□□ -0.31
TUBE1-208ENST00000604743 CLEC4FQ8N1N0 589 aa13.11□□□□□ -0.31
TUBE1-208ENST00000604743 OR56A1Q8NGH5 318 aa13.11□□□□□ -0.31
TUBE1-208ENST00000604743 OR4A15Q8NGL6 344 aa13.11□□□□□ -0.31
TUBE1-208ENST00000604743 ADAMTS15Q8TE58 950 aa13.11□□□□□ -0.31
TUBE1-208ENST00000604743 DUSP19Q8WTR2 217 aa13.11□□□□□ -0.31
TUBE1-208ENST00000604743 RNF138Q8WVD3 245 aa13.11□□□□□ -0.31
TUBE1-208ENST00000604743 ASB5Q8WWX0 329 aa13.11□□□□□ -0.31
TUBE1-208ENST00000604743 HOXB13Q92826 284 aaPredicted RBP13.11□□□□□ -0.31
TUBE1-208ENST00000604743 TBL1XR1Q9BZK7 514 aa13.11□□□□□ -0.31
TUBE1-208ENST00000604743 UCK2Q9BZX2 261 aa13.11□□□□□ -0.31
TUBE1-208ENST00000604743 SDHAF3Q9NRP4 125 aa13.11□□□□□ -0.31
TUBE1-208ENST00000604743 FBXO34Q9NWN3 711 aa13.11□□□□□ -0.31
TUBE1-208ENST00000604743 FAM120CQ9NX05 1096 aaKnown RBP13.11□□□□□ -0.31
TUBE1-208ENST00000604743 TAS2R10Q9NYW0 307 aa13.11□□□□□ -0.31
TUBE1-208ENST00000604743 PCDHGB4Q9UN71 923 aa13.11□□□□□ -0.31
TUBE1-208ENST00000604743 FAF1Q9UNN5 650 aaPredicted RBP13.11□□□□□ -0.31
TUBE1-208ENST00000604743 INTS1Q8N201 2190 aaKnown RBP13.11□□□□□ -0.31
TUBE1-208ENST00000604743 HCFC1P51610 2035 aa13.1□□□□□ -0.31
TUBE1-208ENST00000604743 B4DXG7 233 aa13.1□□□□□ -0.31
TUBE1-208ENST00000604743 C9JVG2 144 aa13.1□□□□□ -0.31
TUBE1-208ENST00000604743 SLCO1B7G3V0H7 640 aa13.1□□□□□ -0.31
TUBE1-208ENST00000604743 C19orf84I3L1E1 186 aa13.1□□□□□ -0.31
TUBE1-208ENST00000604743 ANGPTL1O95841 491 aa13.1□□□□□ -0.31
TUBE1-208ENST00000604743 H2AFXP16104 143 aaPredicted RBP13.1□□□□□ -0.31
TUBE1-208ENST00000604743 DPP4P27487 766 aa13.1□□□□□ -0.31
TUBE1-208ENST00000604743 SRD5A2P31213 254 aa13.1□□□□□ -0.31
TUBE1-208ENST00000604743 KIR3DL1P43629 444 aa13.1□□□□□ -0.31
TUBE1-208ENST00000604743 STARP49675 285 aa13.1□□□□□ -0.31
TUBE1-208ENST00000604743 WNT3P56703 355 aa13.1□□□□□ -0.31
TUBE1-208ENST00000604743 UFM1P61960 85 aa13.1□□□□□ -0.31
TUBE1-208ENST00000604743 SRYQ05066 204 aa13.1□□□□□ -0.31
TUBE1-208ENST00000604743 SLC9B1Q4ZJI4 515 aa13.1□□□□□ -0.31
TUBE1-208ENST00000604743 SPANXN4Q5MJ08 99 aa13.1□□□□□ -0.31
TUBE1-208ENST00000604743 CDC73Q6P1J9 531 aa13.1□□□□□ -0.31
TUBE1-208ENST00000604743 CAMKMTQ7Z624 323 aa13.1□□□□□ -0.31
TUBE1-208ENST00000604743 ZAR1Q86SH2 424 aa13.1□□□□□ -0.31
TUBE1-208ENST00000604743 IFNEQ86WN2 208 aa13.1□□□□□ -0.31
TUBE1-208ENST00000604743 PM20D2Q8IYS1 436 aa13.1□□□□□ -0.31
TUBE1-208ENST00000604743 GATSQ8NAP1 163 aa13.1□□□□□ -0.31
TUBE1-208ENST00000604743 PSMA8Q8TAA3 256 aa13.1□□□□□ -0.31
TUBE1-208ENST00000604743 SFXN5Q8TD22 340 aa13.1□□□□□ -0.31
TUBE1-208ENST00000604743 DYDC1Q8WWB3 177 aa13.1□□□□□ -0.31
TUBE1-208ENST00000604743 MARK4Q96L34 752 aa13.1□□□□□ -0.31
TUBE1-208ENST00000604743 SFXN2Q96NB2 322 aa13.1□□□□□ -0.31
TUBE1-208ENST00000604743 ACTRT3Q9BYD9 372 aa13.1□□□□□ -0.31
TUBE1-208ENST00000604743 OR2B2Q9GZK3 357 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms