RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 KCNA7Q96RP8 456 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 UBL7Q96S82 380 aaPredicted RBP4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 KLHDC3Q9BQ90 382 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 ERVK-6Q9BXR3 956 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 AUNIPQ9H7T9 357 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 KAT8Q9H7Z6 458 aaKnown RBP4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 MCUBQ9NWR8 336 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 SPHK1Q9NYA1 384 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 TAS2R9Q9NYW1 312 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 PPP4R1LQ9P1A2 415 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 PURGQ9UJV8 347 aaKnown RBP4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 SLC45A2Q9UMX9 530 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 ABCG2Q9UNQ0 655 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 USP22Q9UPT9 525 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 BTBD3Q9Y2F9 522 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 TNFRSF18Q9Y5U5 241 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 CDY1Q9Y6F8 540 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 TRBV2A0A0J9YWF9 115 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 PRSS51A0A1B0GVH4 220 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 A0A1W2PRB8 838 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 SAC3D1A6NKF1 404 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 TEX22C9J3V5 150 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 POC1B-GALNT4F8VUJ3 575 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 ACOT7O00154 380 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 DUX1O43812 170 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 LEFTY1O75610 366 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 PRAMEF1O95521 474 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 C4BPAP04003 597 aaKnown RBP4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 F3P13726 295 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 DCTDP32321 178 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 BMP8BP34820 402 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 PTPN7P35236 360 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 ADRA1AP35348 466 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 QARSP47897 775 aaKnown RBP4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 RFX5P48382 616 aaPredicted RBP4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 EPHA5P54756 1037 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 KCNK10P57789 538 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 HERV-K104P63124 156 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 SLC18A2Q05940 514 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 CDK5R2Q13319 367 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 BFSP2Q13515 415 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 UBE2SQ16763 222 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 NRN1LQ496H8 165 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 ZNF691Q5VV52 312 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 SLC16A13Q7RTY0 426 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 BMP8AQ7Z5Y6 402 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 RAB43Q86YS6 212 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 ENTHD1Q8IYW4 607 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 CDK20Q8IZL9 346 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 RNF148Q8N7C7 305 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 KCNG3Q8TAE7 436 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 ACTL9Q8TC94 416 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 DNAJB3Q8WWF6 145 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 OIT3Q8WWZ8 545 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 NR4A3Q92570 626 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 ART4Q93070 314 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 RNF145Q96MT1 663 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 DUX5Q96PT3 197 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 APOL4Q9BPW4 351 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 WDR77Q9BQA1 342 aaPredicted RBP4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 CHRDL1Q9BU40 450 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 CDC42EP4Q9H3Q1 356 aaKnown RBP4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 SEBOXQ9HB31 216 aaPredicted RBP4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 C20orf141Q9NUB4 165 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 MED17Q9NVC6 651 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 PAK1IP1Q9NWT1 392 aaPredicted RBP4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 SDHAF2Q9NX18 166 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 ENTPD2Q9Y5L3 495 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 WNT6Q9Y6F9 365 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 TANC1Q9C0D5 1861 aa4.7□□□□□ -1.66
SPTBN1-206ENST00000602898 A0A087WWL8 130 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 RPS10-NUDT3A0A1W2PQS6 291 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 UBA6A0AVT1 1052 aaPredicted RBP4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 C7orf72A4D263 438 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 ARHGEF33A8MVX0 844 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 DNASE2O00115 360 aaPredicted RBP4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 CSO75390 466 aaKnown RBP4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 IFNA10P01566 189 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 CRHP06850 196 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 TRIM49P0CI25 452 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 TRIM49CP0CI26 452 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 ADORA3P0DMS8 318 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 CBSLP0DN79 551 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 G6PDP11413 515 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 KLRC2P26717 231 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 HIBADHP31937 336 aaKnown RBP4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 PRDX2P32119 198 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 OTX2P32243 289 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 CBSP35520 551 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 MAP3K8P41279 467 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 HLCSP50747 726 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 PLK1P53350 603 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 ARPP19P56211 112 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 PSME3P61289 254 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 HSD11B2P80365 405 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 IL17AQ16552 155 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 SMN1Q16637 294 aaKnown RBP4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 ZNF528Q3MIS6 628 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 KCNIP4Q6PIL6 250 aa4.69□□□□□ -1.66
SPTBN1-206ENST00000602898 TEX261Q6UWH6 196 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms