RNA–Protein interactions for RNA: ENST00000602888.5

UBE2E3-212, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 2

Gene UBE2E3, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-212ENST00000602888 RPAP3Q9H6T3 665 aaPredicted RBP3.38□□□□□ -1.87
UBE2E3-212ENST00000602888 ROPN1Q9HAT0 212 aaPredicted RBP3.38□□□□□ -1.87
UBE2E3-212ENST00000602888 PNO1Q9NRX1 252 aaKnown RBP3.38□□□□□ -1.87
UBE2E3-212ENST00000602888 RBM28Q9NW13 759 aaKnown RBP3.38□□□□□ -1.87
UBE2E3-212ENST00000602888 NYAP2Q9P242 653 aa3.38□□□□□ -1.87
UBE2E3-212ENST00000602888 ABCG2Q9UNQ0 655 aa3.38□□□□□ -1.87
UBE2E3-212ENST00000602888 PDE10AQ9Y233 779 aa3.38□□□□□ -1.87
UBE2E3-212ENST00000602888 CA5BQ9Y2D0 317 aa3.38□□□□□ -1.87
UBE2E3-212ENST00000602888 ABCC9O60706 1549 aa3.38□□□□□ -1.87
UBE2E3-212ENST00000602888 RNF222A6NCQ9 220 aa3.37□□□□□ -1.87
UBE2E3-212ENST00000602888 PDXKO00764 312 aa3.37□□□□□ -1.87
UBE2E3-212ENST00000602888 CDX4O14627 284 aaPredicted RBP3.37□□□□□ -1.87
UBE2E3-212ENST00000602888 CASKO14936 926 aa3.37□□□□□ -1.87
UBE2E3-212ENST00000602888 APBB3O95704 486 aa3.37□□□□□ -1.87
UBE2E3-212ENST00000602888 TGFAP01135 160 aa3.37□□□□□ -1.87
UBE2E3-212ENST00000602888 ANXA4P09525 319 aaPredicted RBP3.37□□□□□ -1.87
UBE2E3-212ENST00000602888 GSTT2P0CG29 244 aa3.37□□□□□ -1.87
UBE2E3-212ENST00000602888 GSTT2BP0CG30 244 aa3.37□□□□□ -1.87
UBE2E3-212ENST00000602888 CCDC166P0CW27 439 aa3.37□□□□□ -1.87
UBE2E3-212ENST00000602888 DRD3P35462 400 aa3.37□□□□□ -1.87
UBE2E3-212ENST00000602888 UGT1A3P35503 534 aa3.37□□□□□ -1.87
UBE2E3-212ENST00000602888 DPYSQ14117 519 aa3.37□□□□□ -1.87
UBE2E3-212ENST00000602888 TFDP1Q14186 410 aa3.37□□□□□ -1.87
UBE2E3-212ENST00000602888 LDLRAP1Q5SW96 308 aa3.37□□□□□ -1.87
UBE2E3-212ENST00000602888 ZNF544Q6NX49 715 aa3.37□□□□□ -1.87
UBE2E3-212ENST00000602888 MOB1BQ7L9L4 216 aa3.37□□□□□ -1.87
UBE2E3-212ENST00000602888 HDDC3Q8N4P3 179 aa3.37□□□□□ -1.87
UBE2E3-212ENST00000602888 MRPL43Q8N983 215 aaKnown RBP3.37□□□□□ -1.87
UBE2E3-212ENST00000602888 TMEM80Q96HE8 168 aa3.37□□□□□ -1.87
UBE2E3-212ENST00000602888 VPS39Q96JC1 886 aa3.37□□□□□ -1.87
UBE2E3-212ENST00000602888 ZNF702PQ9H963 129 aa3.37□□□□□ -1.87
UBE2E3-212ENST00000602888 C1orf123Q9NWV4 160 aa3.37□□□□□ -1.87
UBE2E3-212ENST00000602888 EIF3LQ9Y262 564 aaKnown RBP3.37□□□□□ -1.87
UBE2E3-212ENST00000602888 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.37□□□□□ -1.87
UBE2E3-212ENST00000602888 E9PLD3 99 aa3.36□□□□□ -1.87
UBE2E3-212ENST00000602888 SEC22BO75396 215 aa3.36□□□□□ -1.87
UBE2E3-212ENST00000602888 PSMB1P20618 241 aaKnown RBP3.36□□□□□ -1.87
UBE2E3-212ENST00000602888 CDH5P33151 784 aaPredicted RBP3.36□□□□□ -1.87
UBE2E3-212ENST00000602888 TRPC1P48995 793 aa3.36□□□□□ -1.87
UBE2E3-212ENST00000602888 ATXN3P54252 364 aaPredicted RBP3.36□□□□□ -1.87
UBE2E3-212ENST00000602888 STX17P56962 302 aa3.36□□□□□ -1.87
UBE2E3-212ENST00000602888 RIPPLY3P57055 190 aa3.36□□□□□ -1.87
UBE2E3-212ENST00000602888 RPL32P62910 135 aaKnown RBP3.36□□□□□ -1.87
UBE2E3-212ENST00000602888 KARSQ15046 597 aaKnown RBP3.36□□□□□ -1.87
UBE2E3-212ENST00000602888 PRR4Q16378 134 aa3.36□□□□□ -1.87
UBE2E3-212ENST00000602888 TEX44Q53QW1 395 aa3.36□□□□□ -1.87
UBE2E3-212ENST00000602888 METTL11BQ5VVY1 283 aa3.36□□□□□ -1.87
UBE2E3-212ENST00000602888 TFAP2EQ6VUC0 442 aa3.36□□□□□ -1.87
UBE2E3-212ENST00000602888 LPCAT2Q7L5N7 544 aa3.36□□□□□ -1.87
UBE2E3-212ENST00000602888 IFNEQ86WN2 208 aa3.36□□□□□ -1.87
UBE2E3-212ENST00000602888 BPIFB2Q8N4F0 458 aa3.36□□□□□ -1.87
UBE2E3-212ENST00000602888 C14orf178Q8N769 122 aaPredicted RBP3.36□□□□□ -1.87
UBE2E3-212ENST00000602888 ANKRD20A12PQ8NF67 263 aa3.36□□□□□ -1.87
UBE2E3-212ENST00000602888 MCHR2Q969V1 340 aa3.36□□□□□ -1.87
UBE2E3-212ENST00000602888 SLC25A38Q96DW6 304 aa3.36□□□□□ -1.87
UBE2E3-212ENST00000602888 NUS1Q96E22 293 aa3.36□□□□□ -1.87
UBE2E3-212ENST00000602888 NFKBIZQ9BYH8 718 aa3.36□□□□□ -1.87
UBE2E3-212ENST00000602888 RAB17Q9H0T7 212 aa3.36□□□□□ -1.87
UBE2E3-212ENST00000602888 SOHLH2Q9NX45 425 aa3.36□□□□□ -1.87
UBE2E3-212ENST00000602888 ADAM22Q9P0K1 906 aa3.36□□□□□ -1.87
UBE2E3-212ENST00000602888 L3MBTL1Q9Y468 752 aa3.36□□□□□ -1.87
UBE2E3-212ENST00000602888 MTF2Q9Y483 593 aaPredicted RBP3.36□□□□□ -1.87
UBE2E3-212ENST00000602888 METP08581 1390 aa3.36□□□□□ -1.87
UBE2E3-212ENST00000602888 TNRQ92752 1358 aa3.36□□□□□ -1.87
UBE2E3-212ENST00000602888 WASHC1A8K0Z3 465 aa3.35□□□□□ -1.87
UBE2E3-212ENST00000602888 WWP2O00308 870 aa3.35□□□□□ -1.87
UBE2E3-212ENST00000602888 OR7A17O14581 309 aa3.35□□□□□ -1.87
UBE2E3-212ENST00000602888 RASGRF2O14827 1237 aa3.35□□□□□ -1.87
UBE2E3-212ENST00000602888 HSPB1P04792 205 aaKnown RBP3.35□□□□□ -1.87
UBE2E3-212ENST00000602888 CD55P08174 381 aa3.35□□□□□ -1.87
UBE2E3-212ENST00000602888 RRASP10301 218 aa3.35□□□□□ -1.87
UBE2E3-212ENST00000602888 H2AFXP16104 143 aaPredicted RBP3.35□□□□□ -1.87
UBE2E3-212ENST00000602888 IL10P22301 178 aa3.35□□□□□ -1.87
UBE2E3-212ENST00000602888 RPL4P36578 427 aaKnown RBP3.35□□□□□ -1.87
UBE2E3-212ENST00000602888 RABIFP47224 123 aa3.35□□□□□ -1.87
UBE2E3-212ENST00000602888 OR3A4PP47883 348 aa3.35□□□□□ -1.87
UBE2E3-212ENST00000602888 RND3P61587 244 aa3.35□□□□□ -1.87
UBE2E3-212ENST00000602888 EXOSC2Q13868 293 aaKnown RBP3.35□□□□□ -1.87
UBE2E3-212ENST00000602888 KCNJ11Q14654 390 aa3.35□□□□□ -1.87
UBE2E3-212ENST00000602888 RFTN1Q14699 578 aaPredicted RBP3.35□□□□□ -1.87
UBE2E3-212ENST00000602888 CDKN3Q16667 212 aa3.35□□□□□ -1.87
UBE2E3-212ENST00000602888 DCST2Q5T1A1 773 aa3.35□□□□□ -1.87
UBE2E3-212ENST00000602888 IRGCQ6NXR0 463 aa3.35□□□□□ -1.87
UBE2E3-212ENST00000602888 STAC2Q6ZMT1 411 aa3.35□□□□□ -1.87
UBE2E3-212ENST00000602888 RBM43Q6ZSC3 357 aaKnown RBP3.35□□□□□ -1.87
UBE2E3-212ENST00000602888 KRTAP11-1Q8IUC1 163 aa3.35□□□□□ -1.87
UBE2E3-212ENST00000602888 CEND1Q8N111 149 aa3.35□□□□□ -1.87
UBE2E3-212ENST00000602888 CERS5Q8N5B7 392 aa3.35□□□□□ -1.87
UBE2E3-212ENST00000602888 ARL10Q8N8L6 244 aa3.35□□□□□ -1.87
UBE2E3-212ENST00000602888 OR2L5Q8NG80 312 aa3.35□□□□□ -1.87
UBE2E3-212ENST00000602888 PINX1Q96BK5 328 aaKnown RBP3.35□□□□□ -1.87
UBE2E3-212ENST00000602888 UPRTQ96BW1 309 aa3.35□□□□□ -1.87
UBE2E3-212ENST00000602888 ZNF414Q96IQ9 312 aa3.35□□□□□ -1.87
UBE2E3-212ENST00000602888 FAM111AQ96PZ2 611 aa3.35□□□□□ -1.87
UBE2E3-212ENST00000602888 NMUR2Q9GZQ4 415 aa3.35□□□□□ -1.87
UBE2E3-212ENST00000602888 COMMD4Q9H0A8 199 aa3.35□□□□□ -1.87
UBE2E3-212ENST00000602888 GPN2Q9H9Y4 310 aaPredicted RBP3.35□□□□□ -1.87
UBE2E3-212ENST00000602888 POLD4Q9HCU8 107 aa3.35□□□□□ -1.87
UBE2E3-212ENST00000602888 PLSCR3Q9NRY6 295 aa3.35□□□□□ -1.87
UBE2E3-212ENST00000602888 NINJ2Q9NZG7 142 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms