RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 TSPYL5Q86VY4 417 aaPredicted RBP18.61■□□□□ 0.57
PNKP-214ENST00000600573 OR9Q2Q8NGE9 314 aa18.61■□□□□ 0.57
PNKP-214ENST00000600573 OR4D11Q8NGI4 311 aa18.61■□□□□ 0.57
PNKP-214ENST00000600573 PTPMT1Q8WUK0 201 aaPredicted RBP18.61■□□□□ 0.57
PNKP-214ENST00000600573 SENP5Q96HI0 755 aaPredicted RBP18.61■□□□□ 0.57
PNKP-214ENST00000600573 POLR2J2Q9GZM3 115 aaKnown RBP18.61■□□□□ 0.57
PNKP-214ENST00000600573 POLR2J3Q9H1A7 115 aaKnown RBP18.61■□□□□ 0.57
PNKP-214ENST00000600573 NMNAT1Q9HAN9 279 aaPredicted RBP18.61■□□□□ 0.57
PNKP-214ENST00000600573 VCX3AQ9NNX9 186 aa18.61■□□□□ 0.57
PNKP-214ENST00000600573 RHCGQ9UBD6 479 aa18.61■□□□□ 0.57
PNKP-214ENST00000600573 ERVK-19Q9WJR5 959 aa18.61■□□□□ 0.57
PNKP-214ENST00000600573 KMT2EQ8IZD2 1858 aa18.61■□□□□ 0.57
PNKP-214ENST00000600573 RP1P56715 2156 aa18.61■□□□□ 0.57
PNKP-214ENST00000600573 FAM86C2PA6NEL3 165 aa18.6■□□□□ 0.57
PNKP-214ENST00000600573 POLR1CO15160 346 aaPredicted RBP18.6■□□□□ 0.57
PNKP-214ENST00000600573 KIAA0513O60268 411 aa18.6■□□□□ 0.57
PNKP-214ENST00000600573 CCDC159P0C7I6 412 aa18.6■□□□□ 0.57
PNKP-214ENST00000600573 EEF1B2P24534 225 aaKnown RBP18.6■□□□□ 0.57
PNKP-214ENST00000600573 SSTR4P31391 388 aa18.6■□□□□ 0.57
PNKP-214ENST00000600573 CCKBRP32239 447 aa18.6■□□□□ 0.57
PNKP-214ENST00000600573 PGDP52209 483 aa18.6■□□□□ 0.57
PNKP-214ENST00000600573 PSMD4P55036 377 aaKnown RBP18.6■□□□□ 0.57
PNKP-214ENST00000600573 PSPHP78330 225 aa18.6■□□□□ 0.57
PNKP-214ENST00000600573 MC2RQ01718 297 aa18.6■□□□□ 0.57
PNKP-214ENST00000600573 NSDHLQ15738 373 aa18.6■□□□□ 0.57
PNKP-214ENST00000600573 CNPY1Q3B7I2 92 aa18.6■□□□□ 0.57
PNKP-214ENST00000600573 PWWP2BQ6NUJ5 590 aa18.6■□□□□ 0.57
PNKP-214ENST00000600573 WDR53Q7Z5U6 358 aaPredicted RBP18.6■□□□□ 0.57
PNKP-214ENST00000600573 LACC1Q8IV20 430 aa18.6■□□□□ 0.57
PNKP-214ENST00000600573 PARP8Q8N3A8 854 aa18.6■□□□□ 0.57
PNKP-214ENST00000600573 DGCR14Q96DF8 476 aaKnown RBP18.6■□□□□ 0.57
PNKP-214ENST00000600573 HRASLS5Q96KN8 279 aa18.6■□□□□ 0.57
PNKP-214ENST00000600573 PRRC1Q96M27 445 aa18.6■□□□□ 0.57
PNKP-214ENST00000600573 PNO1Q9NRX1 252 aaKnown RBP18.6■□□□□ 0.57
PNKP-214ENST00000600573 RLIMQ9NVW2 624 aa18.6■□□□□ 0.57
PNKP-214ENST00000600573 MKLN1Q9UL63 735 aa18.6■□□□□ 0.57
PNKP-214ENST00000600573 ZNF443Q9Y2A4 671 aaPredicted RBP18.6■□□□□ 0.57
PNKP-214ENST00000600573 ASXL3Q9C0F0 2248 aa18.6■□□□□ 0.57
PNKP-214ENST00000600573 EFCAB7A8K855 629 aa18.6■□□□□ 0.57
PNKP-214ENST00000600573 SLC1A7O00341 560 aa18.6■□□□□ 0.57
PNKP-214ENST00000600573 KCNK2O95069 426 aa18.6■□□□□ 0.57
PNKP-214ENST00000600573 ADAP00813 363 aa18.6■□□□□ 0.57
PNKP-214ENST00000600573 AGXTP21549 392 aa18.6■□□□□ 0.57
PNKP-214ENST00000600573 ELAVL4P26378 380 aaKnown RBP18.6■□□□□ 0.57
PNKP-214ENST00000600573 RPP38P78345 283 aaKnown RBP18.6■□□□□ 0.57
PNKP-214ENST00000600573 CDK5R2Q13319 367 aa18.6■□□□□ 0.57
PNKP-214ENST00000600573 COL9A2Q14055 689 aaPredicted RBP18.6■□□□□ 0.57
PNKP-214ENST00000600573 VWA2Q5GFL6 755 aa18.6■□□□□ 0.57
PNKP-214ENST00000600573 DCST1Q5T197 706 aa18.6■□□□□ 0.57
PNKP-214ENST00000600573 PRR23CQ6ZRP0 262 aa18.6■□□□□ 0.57
PNKP-214ENST00000600573 OVCH1Q7RTY7 1134 aa18.6■□□□□ 0.57
PNKP-214ENST00000600573 COMTD1Q86VU5 262 aa18.6■□□□□ 0.57
PNKP-214ENST00000600573 RBM45Q8IUH3 476 aaKnown RBP18.6■□□□□ 0.57
PNKP-214ENST00000600573 AQP11Q8NBQ7 271 aa18.6■□□□□ 0.57
PNKP-214ENST00000600573 MORN4Q8NDC4 146 aa18.6■□□□□ 0.57
PNKP-214ENST00000600573 TOR1AIP2Q8NFQ8 470 aa18.6■□□□□ 0.57
PNKP-214ENST00000600573 C16orf52Q8NHV5 167 aa18.6■□□□□ 0.57
PNKP-214ENST00000600573 PIK3R3Q92569 461 aa18.6■□□□□ 0.57
PNKP-214ENST00000600573 LRFN5Q96NI6 719 aa18.6■□□□□ 0.57
PNKP-214ENST00000600573 CDC6Q99741 560 aa18.6■□□□□ 0.57
PNKP-214ENST00000600573 MKL2Q9ULH7 1088 aa18.6■□□□□ 0.57
PNKP-214ENST00000600573 ADAMTS20P59510 1910 aa18.59■□□□□ 0.57
PNKP-214ENST00000600573 COL5A1P20908 1838 aaPredicted RBP18.59■□□□□ 0.57
PNKP-214ENST00000600573 TRBV4-1A0A0J9YWV2 114 aa18.59■□□□□ 0.57
PNKP-214ENST00000600573 A0A1W2PRQ8 180 aa18.59■□□□□ 0.57
PNKP-214ENST00000600573 B4E171 279 aa18.59■□□□□ 0.57
PNKP-214ENST00000600573 ABCB7O75027 752 aa18.59■□□□□ 0.57
PNKP-214ENST00000600573 CPNE3O75131 537 aaKnown RBP18.59■□□□□ 0.57
PNKP-214ENST00000600573 ANGPTL1O95841 491 aa18.59■□□□□ 0.57
PNKP-214ENST00000600573 EPPINO95925 133 aa18.59■□□□□ 0.57
PNKP-214ENST00000600573 TSPAN7P41732 249 aa18.59■□□□□ 0.57
PNKP-214ENST00000600573 DGCR6Q14129 220 aa18.59■□□□□ 0.57
PNKP-214ENST00000600573 ZNF770Q6IQ21 691 aaPredicted RBP18.59■□□□□ 0.57
PNKP-214ENST00000600573 LAIR2Q6ISS4 152 aa18.59■□□□□ 0.57
PNKP-214ENST00000600573 COX15Q7KZN9 410 aa18.59■□□□□ 0.57
PNKP-214ENST00000600573 GPR141Q7Z602 305 aa18.59■□□□□ 0.57
PNKP-214ENST00000600573 STT3BQ8TCJ2 826 aa18.59■□□□□ 0.57
PNKP-214ENST00000600573 DOK4Q8TEW6 326 aa18.59■□□□□ 0.57
PNKP-214ENST00000600573 PRRX2Q99811 253 aa18.59■□□□□ 0.57
PNKP-214ENST00000600573 NIPSNAP1Q9BPW8 284 aa18.59■□□□□ 0.57
PNKP-214ENST00000600573 FNDC11Q9BVV2 318 aa18.59■□□□□ 0.57
PNKP-214ENST00000600573 VN1R1Q9GZP7 353 aa18.59■□□□□ 0.57
PNKP-214ENST00000600573 SLC26A1Q9H2B4 701 aa18.59■□□□□ 0.57
PNKP-214ENST00000600573 ANKRD19PQ9H560 264 aa18.59■□□□□ 0.57
PNKP-214ENST00000600573 OCIAD1Q9NX40 245 aa18.59■□□□□ 0.57
PNKP-214ENST00000600573 MRTO4Q9UKD2 239 aaKnown RBP18.59■□□□□ 0.57
PNKP-214ENST00000600573 A4GNTQ9UNA3 340 aa18.59■□□□□ 0.57
PNKP-214ENST00000600573 MGAT4BQ9UQ53 548 aa18.59■□□□□ 0.57
PNKP-214ENST00000600573 NUP210LQ5VU65 1888 aa18.58■□□□□ 0.57
PNKP-214ENST00000600573 CCDC160A6NGH7 325 aa18.58■□□□□ 0.56
PNKP-214ENST00000600573 OR6C76A6NM76 312 aa18.58■□□□□ 0.56
PNKP-214ENST00000600573 CDX4O14627 284 aaPredicted RBP18.58■□□□□ 0.56
PNKP-214ENST00000600573 NME6O75414 186 aaPredicted RBP18.58■□□□□ 0.56
PNKP-214ENST00000600573 ZIC2O95409 532 aaPredicted RBP18.58■□□□□ 0.56
PNKP-214ENST00000600573 ZGLP1P0C6A0 271 aa18.58■□□□□ 0.56
PNKP-214ENST00000600573 CD59P13987 128 aa18.58■□□□□ 0.56
PNKP-214ENST00000600573 NID1P14543 1247 aa18.58■□□□□ 0.56
PNKP-214ENST00000600573 LCN1P31025 176 aa18.58■□□□□ 0.56
PNKP-214ENST00000600573 GGT2P36268 569 aa18.58■□□□□ 0.56
PNKP-214ENST00000600573 PPICP45877 212 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms