RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 KCNJ5P48544 419 aa5.46□□□□□ -1.54
VRK3-220ENST00000600259 PLTPP55058 493 aa5.46□□□□□ -1.54
VRK3-220ENST00000600259 CDH13P55290 713 aa5.46□□□□□ -1.54
VRK3-220ENST00000600259 PSPHP78330 225 aa5.46□□□□□ -1.54
VRK3-220ENST00000600259 DMTNQ08495 405 aa5.46□□□□□ -1.54
VRK3-220ENST00000600259 IFT88Q13099 833 aa5.46□□□□□ -1.54
VRK3-220ENST00000600259 FGFBP1Q14512 234 aa5.46□□□□□ -1.54
VRK3-220ENST00000600259 GANABQ14697 944 aaKnown RBP5.46□□□□□ -1.54
VRK3-220ENST00000600259 PGGHGQ32M88 737 aa5.46□□□□□ -1.54
VRK3-220ENST00000600259 CYP27C1Q4G0S4 372 aa5.46□□□□□ -1.54
VRK3-220ENST00000600259 TCHHL1Q5QJ38 904 aaPredicted RBP5.46□□□□□ -1.54
VRK3-220ENST00000600259 NCMAPQ5T1S8 102 aa5.46□□□□□ -1.54
VRK3-220ENST00000600259 GALNT18Q6P9A2 607 aa5.46□□□□□ -1.54
VRK3-220ENST00000600259 PODNL1Q6PEZ8 512 aa5.46□□□□□ -1.54
VRK3-220ENST00000600259 ATG4DQ86TL0 474 aaPredicted RBP5.46□□□□□ -1.54
VRK3-220ENST00000600259 MARCH3Q86UD3 253 aa5.46□□□□□ -1.54
VRK3-220ENST00000600259 OR6K3Q8NGY3 331 aa5.46□□□□□ -1.54
VRK3-220ENST00000600259 UHMK1Q8TAS1 419 aaKnown RBP5.46□□□□□ -1.54
VRK3-220ENST00000600259 C16orf78Q8WTQ4 265 aa5.46□□□□□ -1.54
VRK3-220ENST00000600259 SELENOMQ8WWX9 145 aa5.46□□□□□ -1.54
VRK3-220ENST00000600259 AKAP1Q92667 903 aaKnown RBP eCLIP5.46□□□□□ -1.54
VRK3-220ENST00000600259 HOXB13Q92826 284 aaPredicted RBP5.46□□□□□ -1.54
VRK3-220ENST00000600259 NEUROG1Q92886 237 aa5.46□□□□□ -1.54
VRK3-220ENST00000600259 ATP6V1E2Q96A05 226 aa5.46□□□□□ -1.54
VRK3-220ENST00000600259 FAIM2Q9BWQ8 316 aa5.46□□□□□ -1.54
VRK3-220ENST00000600259 SLCO5A1Q9H2Y9 848 aa5.46□□□□□ -1.54
VRK3-220ENST00000600259 CXorf56Q9H5V9 222 aa5.46□□□□□ -1.54
VRK3-220ENST00000600259 SLC35C2Q9NQQ7 365 aa5.46□□□□□ -1.54
VRK3-220ENST00000600259 SIRT5Q9NXA8 310 aa5.46□□□□□ -1.54
VRK3-220ENST00000600259 TAS2R7Q9NYW3 318 aa5.46□□□□□ -1.54
VRK3-220ENST00000600259 PPP4R1LQ9P1A2 415 aa5.46□□□□□ -1.54
VRK3-220ENST00000600259 VPS29Q9UBQ0 182 aa5.46□□□□□ -1.54
VRK3-220ENST00000600259 RNF14Q9UBS8 474 aa5.46□□□□□ -1.54
VRK3-220ENST00000600259 MCM8Q9UJA3 840 aa5.46□□□□□ -1.54
VRK3-220ENST00000600259 CLEC4AQ9UMR7 237 aa5.46□□□□□ -1.54
VRK3-220ENST00000600259 C19orf53Q9UNZ5 99 aaPredicted RBP5.46□□□□□ -1.54
VRK3-220ENST00000600259 LAMP3Q9UQV4 416 aa5.46□□□□□ -1.54
VRK3-220ENST00000600259 GPR52Q9Y2T5 361 aa5.46□□□□□ -1.54
VRK3-220ENST00000600259 AP4B1Q9Y6B7 739 aa5.46□□□□□ -1.54
VRK3-220ENST00000600259 ZNF780BQ9Y6R6 833 aa5.46□□□□□ -1.54
VRK3-220ENST00000600259 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.45□□□□□ -1.544e-10■■■■■ 37.9
VRK3-220ENST00000600259 A0A087WV62 115 aa5.45□□□□□ -1.54
VRK3-220ENST00000600259 A0A0J9YW62 118 aa5.45□□□□□ -1.54
VRK3-220ENST00000600259 DPRXA6NFQ7 191 aa5.45□□□□□ -1.54
VRK3-220ENST00000600259 H3BML4 177 aa5.45□□□□□ -1.54
VRK3-220ENST00000600259 UPK1AO00322 258 aa5.45□□□□□ -1.54
VRK3-220ENST00000600259 MANBAO00462 879 aa5.45□□□□□ -1.54
VRK3-220ENST00000600259 EFNA2O43921 213 aa5.45□□□□□ -1.54
VRK3-220ENST00000600259 GPRIN2O60269 458 aa5.45□□□□□ -1.54
VRK3-220ENST00000600259 OR4F21O95013 312 aa5.45□□□□□ -1.54
VRK3-220ENST00000600259 F12P00748 615 aaPredicted RBP5.45□□□□□ -1.54
VRK3-220ENST00000600259 IGKV1D-16P01601 117 aa5.45□□□□□ -1.54
VRK3-220ENST00000600259 IGHV4-39P01824 125 aa5.45□□□□□ -1.54
VRK3-220ENST00000600259 RBP1P09455 135 aa5.45□□□□□ -1.54
VRK3-220ENST00000600259 IL12BP29460 328 aa5.45□□□□□ -1.54
VRK3-220ENST00000600259 TYK2P29597 1187 aa5.45□□□□□ -1.54
VRK3-220ENST00000600259 STX2P32856 288 aa5.45□□□□□ -1.54
VRK3-220ENST00000600259 IDUAP35475 653 aa5.45□□□□□ -1.54
VRK3-220ENST00000600259 ACVR1BP36896 505 aa5.45□□□□□ -1.54
VRK3-220ENST00000600259 PAFAH1B1P43034 410 aa5.45□□□□□ -1.54
VRK3-220ENST00000600259 ALDH9A1P49189 494 aa5.45□□□□□ -1.54
VRK3-220ENST00000600259 RPS3AP61247 264 aaKnown RBP5.45□□□□□ -1.54
VRK3-220ENST00000600259 GNG11P61952 73 aa5.45□□□□□ -1.54
VRK3-220ENST00000600259 RPS4XP62701 263 aaKnown RBP5.45□□□□□ -1.54
VRK3-220ENST00000600259 MRPS22P82650 360 aaKnown RBP5.45□□□□□ -1.54
VRK3-220ENST00000600259 PRR5P85299 388 aa5.45□□□□□ -1.54
VRK3-220ENST00000600259 CALCOCO2Q13137 446 aa5.45□□□□□ -1.54
VRK3-220ENST00000600259 ETFDHQ16134 617 aa5.45□□□□□ -1.54
VRK3-220ENST00000600259 EXOC3L2Q2M3D2 409 aa5.45□□□□□ -1.54
VRK3-220ENST00000600259 UNC50Q53HI1 259 aa5.45□□□□□ -1.54
VRK3-220ENST00000600259 RAET1LQ5VY80 246 aa5.45□□□□□ -1.54
VRK3-220ENST00000600259 TTC19Q6DKK2 380 aaPredicted RBP5.45□□□□□ -1.54
VRK3-220ENST00000600259 GALNT10Q86SR1 603 aa5.45□□□□□ -1.54
VRK3-220ENST00000600259 WFDC8Q8IUA0 241 aa5.45□□□□□ -1.54
VRK3-220ENST00000600259 GABRG1Q8N1C3 465 aa5.45□□□□□ -1.54
VRK3-220ENST00000600259 SPATA4Q8NEY3 305 aa5.45□□□□□ -1.54
VRK3-220ENST00000600259 OR10H5Q8NGA6 315 aa5.45□□□□□ -1.54
VRK3-220ENST00000600259 OR10D3Q8NH80 312 aa5.45□□□□□ -1.54
VRK3-220ENST00000600259 POC1BQ8TC44 478 aa5.45□□□□□ -1.54
VRK3-220ENST00000600259 TMEM158Q8WZ71 300 aa5.45□□□□□ -1.54
VRK3-220ENST00000600259 EXOSC8Q96B26 276 aaKnown RBP5.45□□□□□ -1.54
VRK3-220ENST00000600259 MTBPQ96DY7 904 aa5.45□□□□□ -1.54
VRK3-220ENST00000600259 MRRFQ96E11 262 aaKnown RBP5.45□□□□□ -1.54
VRK3-220ENST00000600259 DTNBP1Q96EV8 351 aa5.45□□□□□ -1.54
VRK3-220ENST00000600259 APIPQ96GX9 242 aa5.45□□□□□ -1.54
VRK3-220ENST00000600259 GMPPAQ96IJ6 420 aaPredicted RBP5.45□□□□□ -1.54
VRK3-220ENST00000600259 FUT8Q9BYC5 575 aa5.45□□□□□ -1.54
VRK3-220ENST00000600259 GRIP2Q9C0E4 1043 aa5.45□□□□□ -1.54
VRK3-220ENST00000600259 ACTR6Q9GZN1 396 aa5.45□□□□□ -1.54
VRK3-220ENST00000600259 STMN4Q9H169 189 aaPredicted RBP5.45□□□□□ -1.54
VRK3-220ENST00000600259 ELOVL6Q9H5J4 265 aa5.45□□□□□ -1.54
VRK3-220ENST00000600259 SDHAF3Q9NRP4 125 aa5.45□□□□□ -1.54
VRK3-220ENST00000600259 ZDHHC18Q9NUE0 388 aa5.45□□□□□ -1.54
VRK3-220ENST00000600259 FAM120CQ9NX05 1096 aaKnown RBP5.45□□□□□ -1.54
VRK3-220ENST00000600259 TAS2R9Q9NYW1 312 aa5.45□□□□□ -1.54
VRK3-220ENST00000600259 DMGDHQ9UI17 866 aaKnown RBP5.45□□□□□ -1.54
VRK3-220ENST00000600259 ABCG2Q9UNQ0 655 aa5.45□□□□□ -1.54
VRK3-220ENST00000600259 SVEP1Q4LDE5 3571 aa5.44□□□□□ -1.54
VRK3-220ENST00000600259 GXYLT2A0PJZ3 443 aa5.44□□□□□ -1.54
VRK3-220ENST00000600259 SERTM1A2A2V5 107 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms