RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 VMACQ2NL98 169 aa11.62□□□□□ -0.55
CHMP2A-206ENST00000600118 SPATS1Q496A3 300 aa11.62□□□□□ -0.55
CHMP2A-206ENST00000600118 LACTB2Q53H82 288 aaPredicted RBP11.62□□□□□ -0.55
CHMP2A-206ENST00000600118 SPINK14Q6IE38 97 aa11.62□□□□□ -0.55
CHMP2A-206ENST00000600118 TMEM81Q6P7N7 255 aa11.62□□□□□ -0.55
CHMP2A-206ENST00000600118 IL20RBQ6UXL0 311 aa11.62□□□□□ -0.55
CHMP2A-206ENST00000600118 BNC2Q6ZN30 1099 aaPredicted RBP11.62□□□□□ -0.55
CHMP2A-206ENST00000600118 FRRS1Q6ZNA5 592 aa11.62□□□□□ -0.55
CHMP2A-206ENST00000600118 RTL4Q6ZR62 310 aa11.62□□□□□ -0.55
CHMP2A-206ENST00000600118 GALNT10Q86SR1 603 aa11.62□□□□□ -0.55
CHMP2A-206ENST00000600118 HPS6Q86YV9 775 aa11.62□□□□□ -0.55
CHMP2A-206ENST00000600118 CYP4Z2PQ8N1L4 340 aa11.62□□□□□ -0.55
CHMP2A-206ENST00000600118 EXD3Q8N9H8 876 aa11.62□□□□□ -0.55
CHMP2A-206ENST00000600118 C11orf65Q8NCR3 313 aa11.62□□□□□ -0.55
CHMP2A-206ENST00000600118 SPPL2AQ8TCT8 520 aa11.62□□□□□ -0.55
CHMP2A-206ENST00000600118 PAQR8Q8TEZ7 354 aa11.62□□□□□ -0.55
CHMP2A-206ENST00000600118 TM9SF4Q92544 642 aa11.62□□□□□ -0.55
CHMP2A-206ENST00000600118 TMEM19Q96HH6 336 aa11.62□□□□□ -0.55
CHMP2A-206ENST00000600118 SIGLEC12Q96PQ1 595 aa11.62□□□□□ -0.55
CHMP2A-206ENST00000600118 CDRT15Q96T59 188 aa11.62□□□□□ -0.55
CHMP2A-206ENST00000600118 TREX2Q9BQ50 279 aaPredicted RBP11.62□□□□□ -0.55
CHMP2A-206ENST00000600118 FLRT3Q9NZU0 649 aa11.62□□□□□ -0.55
CHMP2A-206ENST00000600118 LRFN1Q9P244 771 aa11.62□□□□□ -0.55
CHMP2A-206ENST00000600118 CD300AQ9UGN4 299 aa11.62□□□□□ -0.55
CHMP2A-206ENST00000600118 KCNE5Q9UJ90 142 aa11.62□□□□□ -0.55
CHMP2A-206ENST00000600118 CNOT11Q9UKZ1 510 aaKnown RBP11.62□□□□□ -0.55
CHMP2A-206ENST00000600118 USP22Q9UPT9 525 aa11.62□□□□□ -0.55
CHMP2A-206ENST00000600118 PCDHGA10Q9Y5H3 936 aa11.62□□□□□ -0.55
CHMP2A-206ENST00000600118 DSPP15924 2871 aaKnown RBP11.61□□□□□ -0.55
CHMP2A-206ENST00000600118 ANKRD33BA6NCL7 494 aa11.61□□□□□ -0.55
CHMP2A-206ENST00000600118 TP53I11O14683 189 aa11.61□□□□□ -0.55
CHMP2A-206ENST00000600118 SLC28A2O43868 658 aa11.61□□□□□ -0.55
CHMP2A-206ENST00000600118 FADS1O60427 444 aa11.61□□□□□ -0.55
CHMP2A-206ENST00000600118 ICOSLGO75144 302 aa11.61□□□□□ -0.55
CHMP2A-206ENST00000600118 GCM2O75603 506 aaPredicted RBP11.61□□□□□ -0.55
CHMP2A-206ENST00000600118 PGM3O95394 542 aa11.61□□□□□ -0.55
CHMP2A-206ENST00000600118 UTS2O95399 124 aa11.61□□□□□ -0.55
CHMP2A-206ENST00000600118 F10P00742 488 aa11.61□□□□□ -0.55
CHMP2A-206ENST00000600118 BCHEP06276 602 aa11.61□□□□□ -0.55
CHMP2A-206ENST00000600118 CCL3P10147 92 aa11.61□□□□□ -0.55
CHMP2A-206ENST00000600118 HSD17B1P14061 328 aa11.61□□□□□ -0.55
CHMP2A-206ENST00000600118 ATP6V1C1P21283 382 aa11.61□□□□□ -0.55
CHMP2A-206ENST00000600118 TBXA2RP21731 343 aa11.61□□□□□ -0.55
CHMP2A-206ENST00000600118 RFX3P48380 749 aa11.61□□□□□ -0.55
CHMP2A-206ENST00000600118 CD97P48960 835 aa11.61□□□□□ -0.55
CHMP2A-206ENST00000600118 TNFSF10P50591 281 aa11.61□□□□□ -0.55
CHMP2A-206ENST00000600118 CRISP3P54108 245 aa11.61□□□□□ -0.55
CHMP2A-206ENST00000600118 PCBP3P57721 371 aaKnown RBP11.61□□□□□ -0.55
CHMP2A-206ENST00000600118 NCALDP61601 193 aa11.61□□□□□ -0.55
CHMP2A-206ENST00000600118 ARG2P78540 354 aa11.61□□□□□ -0.55
CHMP2A-206ENST00000600118 OC90Q02509 493 aaPredicted RBP11.61□□□□□ -0.55
CHMP2A-206ENST00000600118 CEACAM7Q14002 265 aa11.61□□□□□ -0.55
CHMP2A-206ENST00000600118 SCARB2Q14108 478 aa11.61□□□□□ -0.55
CHMP2A-206ENST00000600118 GNA13Q14344 377 aa11.61□□□□□ -0.55
CHMP2A-206ENST00000600118 ZNF141Q15928 474 aa11.61□□□□□ -0.55
CHMP2A-206ENST00000600118 DNAL1Q4LDG9 190 aa11.61□□□□□ -0.55
CHMP2A-206ENST00000600118 GPAT3Q53EU6 434 aa11.61□□□□□ -0.55
CHMP2A-206ENST00000600118 SAMD4BQ5PRF9 694 aaKnown RBP11.61□□□□□ -0.55
CHMP2A-206ENST00000600118 ERICH5Q6P6B1 374 aa11.61□□□□□ -0.55
CHMP2A-206ENST00000600118 PCSK4Q6UW60 755 aa11.61□□□□□ -0.55
CHMP2A-206ENST00000600118 CCDC121Q6ZUS5 278 aa11.61□□□□□ -0.55
CHMP2A-206ENST00000600118 MDGA2Q7Z553 956 aa11.61□□□□□ -0.55
CHMP2A-206ENST00000600118 ARHGAP24Q8N264 748 aa11.61□□□□□ -0.55
CHMP2A-206ENST00000600118 ZNF619Q8N2I2 560 aa11.61□□□□□ -0.55
CHMP2A-206ENST00000600118 HIPK4Q8NE63 616 aa11.61□□□□□ -0.55
CHMP2A-206ENST00000600118 OR2T12Q8NG77 320 aa11.61□□□□□ -0.55
CHMP2A-206ENST00000600118 OR5M3Q8NGP4 307 aa11.61□□□□□ -0.55
CHMP2A-206ENST00000600118 OR4C3Q8NH37 302 aa11.61□□□□□ -0.55
CHMP2A-206ENST00000600118 NFKBIDQ8NI38 313 aa11.61□□□□□ -0.55
CHMP2A-206ENST00000600118 C9orf43Q8TAL5 461 aaPredicted RBP11.61□□□□□ -0.55
CHMP2A-206ENST00000600118 OIT3Q8WWZ8 545 aa11.61□□□□□ -0.55
CHMP2A-206ENST00000600118 PMM1Q92871 262 aa11.61□□□□□ -0.55
CHMP2A-206ENST00000600118 ZG16BQ96DA0 208 aa11.61□□□□□ -0.55
CHMP2A-206ENST00000600118 TMCO6Q96DC7 493 aa11.61□□□□□ -0.55
CHMP2A-206ENST00000600118 NODALQ96S42 347 aa11.61□□□□□ -0.55
CHMP2A-206ENST00000600118 BTBD10Q9BSF8 475 aa11.61□□□□□ -0.55
CHMP2A-206ENST00000600118 HOXD1Q9GZZ0 328 aa11.61□□□□□ -0.55
CHMP2A-206ENST00000600118 LRMDAQ9H2I8 198 aa11.61□□□□□ -0.55
CHMP2A-206ENST00000600118 ALG2Q9H553 416 aa11.61□□□□□ -0.55
CHMP2A-206ENST00000600118 PIF1Q9H611 641 aa11.61□□□□□ -0.55
CHMP2A-206ENST00000600118 PROK2Q9HC23 129 aa11.61□□□□□ -0.55
CHMP2A-206ENST00000600118 ADA2Q9NZK5 511 aa11.61□□□□□ -0.55
CHMP2A-206ENST00000600118 CALML5Q9NZT1 146 aa11.61□□□□□ -0.55
CHMP2A-206ENST00000600118 PRPF19Q9UMS4 504 aaKnown RBP11.61□□□□□ -0.55
CHMP2A-206ENST00000600118 TP53TG5Q9Y2B4 290 aa11.61□□□□□ -0.55
CHMP2A-206ENST00000600118 WDR45Q9Y484 360 aa11.61□□□□□ -0.55
CHMP2A-206ENST00000600118 CSAG2Q9Y5P2 127 aa11.61□□□□□ -0.55
CHMP2A-206ENST00000600118 CPAMD8Q8IZJ3 1885 aa11.61□□□□□ -0.55
CHMP2A-206ENST00000600118 A0A0G2JPF8 293 aa11.6□□□□□ -0.55
CHMP2A-206ENST00000600118 CENPVL1A0A0U1RR11 272 aa11.6□□□□□ -0.55
CHMP2A-206ENST00000600118 ELOVL7A1L3X0 281 aa11.6□□□□□ -0.55
CHMP2A-206ENST00000600118 TMEM247A6NEH6 219 aa11.6□□□□□ -0.55
CHMP2A-206ENST00000600118 HNRNPCL2B2RXH8 293 aa11.6□□□□□ -0.55
CHMP2A-206ENST00000600118 HNRNPCL3B7ZW38 293 aa11.6□□□□□ -0.55
CHMP2A-206ENST00000600118 ERVH48-1M5A8F1 160 aa11.6□□□□□ -0.55
CHMP2A-206ENST00000600118 GYG2O15488 501 aa11.6□□□□□ -0.55
CHMP2A-206ENST00000600118 HS6ST1O60243 411 aa11.6□□□□□ -0.55
CHMP2A-206ENST00000600118 HNRNPCL4P0DMR1 293 aa11.6□□□□□ -0.55
CHMP2A-206ENST00000600118 RPS4Y1P22090 263 aaKnown RBP11.6□□□□□ -0.55
CHMP2A-206ENST00000600118 DCTP40126 519 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms