RNA–Protein interactions for RNA: ENST00000598896.5

SYMPK-212, Transcript of symplekin, humanhuman

TSL 1 (best)

Gene SYMPK, Length 1,899 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-212ENST00000598896 PRKAR1BP31321 381 aa21.58■■□□□ 1.04
SYMPK-212ENST00000598896 CLIP4Q8N3C7 705 aa21.58■■□□□ 1.04
SYMPK-212ENST00000598896 LCORQ96JN0 433 aaPredicted RBP21.58■■□□□ 1.04
SYMPK-212ENST00000598896 C19orf25Q9UFG5 118 aaPredicted RBP21.58■■□□□ 1.04
SYMPK-212ENST00000598896 ENPP4Q9Y6X5 453 aa21.58■■□□□ 1.04
SYMPK-212ENST00000598896 LOC102723996A0A087X1L8 192 aa21.57■■□□□ 1.04
SYMPK-212ENST00000598896 FRG2CA6NGY1 282 aa21.57■■□□□ 1.04
SYMPK-212ENST00000598896 DRD5P21918 477 aa21.57■■□□□ 1.04
SYMPK-212ENST00000598896 NOVA1P51513 510 aaKnown RBP21.57■■□□□ 1.04
SYMPK-212ENST00000598896 FLYWCH1Q4VC44 716 aa21.57■■□□□ 1.04
SYMPK-212ENST00000598896 ZNF836Q6ZNA1 936 aa21.57■■□□□ 1.04
SYMPK-212ENST00000598896 DNAJC9Q8WXX5 260 aa21.57■■□□□ 1.04
SYMPK-212ENST00000598896 C9orf16Q9BUW7 83 aa21.57■■□□□ 1.04
SYMPK-212ENST00000598896 CDC14CA4D256 554 aa21.56■■□□□ 1.04
SYMPK-212ENST00000598896 OR6C76A6NM76 312 aa21.56■■□□□ 1.04
SYMPK-212ENST00000598896 DLL1O00548 723 aa21.56■■□□□ 1.04
SYMPK-212ENST00000598896 IL7RP16871 459 aa21.56■■□□□ 1.04
SYMPK-212ENST00000598896 TCN2P20062 427 aa21.56■■□□□ 1.04
SYMPK-212ENST00000598896 RRM2P31350 389 aa21.56■■□□□ 1.04
SYMPK-212ENST00000598896 DCTP40126 519 aa21.56■■□□□ 1.04
SYMPK-212ENST00000598896 RNF144AP50876 292 aaPredicted RBP21.56■■□□□ 1.04
SYMPK-212ENST00000598896 RPS18P62269 152 aaKnown RBP21.56■■□□□ 1.04
SYMPK-212ENST00000598896 PPP4R4Q6NUP7 873 aa21.56■■□□□ 1.04
SYMPK-212ENST00000598896 TCTN3Q6NUS6 607 aa21.56■■□□□ 1.04
SYMPK-212ENST00000598896 DHRS4L2Q6PKH6 230 aa21.56■■□□□ 1.04
SYMPK-212ENST00000598896 TMPRSS12Q86WS5 348 aa21.56■■□□□ 1.04
SYMPK-212ENST00000598896 OR6T1Q8NGN1 323 aa21.56■■□□□ 1.04
SYMPK-212ENST00000598896 CNOT11Q9UKZ1 510 aaKnown RBP21.56■■□□□ 1.04
SYMPK-212ENST00000598896 C15orf41Q9Y2V0 281 aa21.56■■□□□ 1.04
SYMPK-212ENST00000598896 IFT52Q9Y366 437 aa21.56■■□□□ 1.04
SYMPK-212ENST00000598896 TESMINQ9Y4I5 508 aa21.56■■□□□ 1.04
SYMPK-212ENST00000598896 HS3ST3B1Q9Y662 390 aa21.56■■□□□ 1.04
SYMPK-212ENST00000598896 CNOT1A5YKK6 2376 aaKnown RBP21.56■■□□□ 1.04
SYMPK-212ENST00000598896 PTPRBP23467 1997 aa21.56■■□□□ 1.04
SYMPK-212ENST00000598896 SYT5O00445 386 aa21.56■■□□□ 1.04
SYMPK-212ENST00000598896 EI24O14681 340 aa21.56■■□□□ 1.04
SYMPK-212ENST00000598896 FFAR1O14842 300 aa21.56■■□□□ 1.04
SYMPK-212ENST00000598896 FRS3O43559 492 aa21.56■■□□□ 1.04
SYMPK-212ENST00000598896 THBS1P07996 1170 aa21.56■■□□□ 1.04
SYMPK-212ENST00000598896 GUSBP08236 651 aa21.56■■□□□ 1.04
SYMPK-212ENST00000598896 EEF1A1P68104 462 aaKnown RBP21.56■■□□□ 1.04
SYMPK-212ENST00000598896 LAPTM4AQ15012 233 aa21.56■■□□□ 1.04
SYMPK-212ENST00000598896 OTUD3Q5T2D3 398 aaPredicted RBP21.56■■□□□ 1.04
SYMPK-212ENST00000598896 SLC29A4Q7RTT9 530 aa21.56■■□□□ 1.04
SYMPK-212ENST00000598896 CACTIN-AS1Q8N1I8 211 aa21.56■■□□□ 1.04
SYMPK-212ENST00000598896 ZNF441Q8N8Z8 693 aa21.56■■□□□ 1.04
SYMPK-212ENST00000598896 EFHD2Q96C19 240 aaPredicted RBP21.56■■□□□ 1.04
SYMPK-212ENST00000598896 BARD1Q99728 777 aaKnown RBP21.56■■□□□ 1.04
SYMPK-212ENST00000598896 G6PC3Q9BUM1 346 aa21.56■■□□□ 1.04
SYMPK-212ENST00000598896 LIN28AQ9H9Z2 209 aaKnown RBP21.56■■□□□ 1.04
SYMPK-212ENST00000598896 LRRC42Q9Y546 428 aa21.56■■□□□ 1.04
SYMPK-212ENST00000598896 G3V2T6 193 aa21.55■■□□□ 1.04
SYMPK-212ENST00000598896 DPM1O60762 260 aa21.55■■□□□ 1.04
SYMPK-212ENST00000598896 E2F6O75461 281 aa21.55■■□□□ 1.04
SYMPK-212ENST00000598896 DNAJB5O75953 348 aa21.55■■□□□ 1.04
SYMPK-212ENST00000598896 DBIP07108 87 aaKnown RBP21.55■■□□□ 1.04
SYMPK-212ENST00000598896 ITGA2P17301 1181 aa21.55■■□□□ 1.04
SYMPK-212ENST00000598896 ATP6V1C1P21283 382 aa21.55■■□□□ 1.04
SYMPK-212ENST00000598896 FOLR3P41439 243 aa21.55■■□□□ 1.04
SYMPK-212ENST00000598896 SLC26A5P58743 744 aa21.55■■□□□ 1.04
SYMPK-212ENST00000598896 RNF4P78317 190 aa21.55■■□□□ 1.04
SYMPK-212ENST00000598896 PCOLCEQ15113 449 aa21.55■■□□□ 1.04
SYMPK-212ENST00000598896 NPTX1Q15818 432 aa21.55■■□□□ 1.04
SYMPK-212ENST00000598896 CPEB4Q17RY0 729 aaKnown RBP eCLIP21.55■■□□□ 1.04
SYMPK-212ENST00000598896 DEF8Q6ZN54 512 aa21.55■■□□□ 1.04
SYMPK-212ENST00000598896 ZNF605Q86T29 641 aa21.55■■□□□ 1.04
SYMPK-212ENST00000598896 TSPYL5Q86VY4 417 aaPredicted RBP21.55■■□□□ 1.04
SYMPK-212ENST00000598896 ZDHHC13Q8IUH4 622 aa21.55■■□□□ 1.04
SYMPK-212ENST00000598896 ZNF347Q96SE7 839 aa21.55■■□□□ 1.04
SYMPK-212ENST00000598896 ARHGDIGQ99819 225 aa21.55■■□□□ 1.04
SYMPK-212ENST00000598896 TCFL5Q9UL49 500 aa21.55■■□□□ 1.04
SYMPK-212ENST00000598896 SLC9A8Q9Y2E8 581 aa21.55■■□□□ 1.04
SYMPK-212ENST00000598896 SAMHD1Q9Y3Z3 626 aaKnown RBP21.55■■□□□ 1.04
SYMPK-212ENST00000598896 FREM2Q5SZK8 3169 aa21.55■■□□□ 1.04
SYMPK-212ENST00000598896 C7orf72A4D263 438 aa21.54■■□□□ 1.04
SYMPK-212ENST00000598896 NPIPB9F8W1W9 429 aa21.54■■□□□ 1.04
SYMPK-212ENST00000598896 RASAL1O95294 804 aa21.54■■□□□ 1.04
SYMPK-212ENST00000598896 NID1P14543 1247 aa21.54■■□□□ 1.04
SYMPK-212ENST00000598896 NR0B1P51843 470 aaKnown RBP21.54■■□□□ 1.04
SYMPK-212ENST00000598896 DCAF7P61962 342 aa21.54■■□□□ 1.04
SYMPK-212ENST00000598896 PLAURQ03405 335 aa21.54■■□□□ 1.04
SYMPK-212ENST00000598896 GANABQ14697 944 aaKnown RBP21.54■■□□□ 1.04
SYMPK-212ENST00000598896 LARS2Q15031 903 aaKnown RBP21.54■■□□□ 1.04
SYMPK-212ENST00000598896 PRR22Q8IZ63 422 aa21.54■■□□□ 1.04
SYMPK-212ENST00000598896 PMM1Q92871 262 aa21.54■■□□□ 1.04
SYMPK-212ENST00000598896 VMP1Q96GC9 406 aa21.54■■□□□ 1.04
SYMPK-212ENST00000598896 PIP5K1AQ99755 562 aa21.54■■□□□ 1.04
SYMPK-212ENST00000598896 REEP1Q9H902 201 aa21.54■■□□□ 1.04
SYMPK-212ENST00000598896 RHCGQ9UBD6 479 aa21.54■■□□□ 1.04
SYMPK-212ENST00000598896 IGHV1-45A0A0A0MS14 117 aa21.54■■□□□ 1.04
SYMPK-212ENST00000598896 BCAS1O75363 584 aaPredicted RBP21.54■■□□□ 1.04
SYMPK-212ENST00000598896 RHCEP18577 417 aa21.54■■□□□ 1.04
SYMPK-212ENST00000598896 DECR1Q16698 335 aa21.54■■□□□ 1.04
SYMPK-212ENST00000598896 PDZK1Q5T2W1 519 aa21.54■■□□□ 1.04
SYMPK-212ENST00000598896 HLA-DQA1Q5Y7H0 255 aa21.54■■□□□ 1.04
SYMPK-212ENST00000598896 ANKRD34AQ69YU3 496 aa21.54■■□□□ 1.04
SYMPK-212ENST00000598896 HSDL2Q6YN16 418 aa21.54■■□□□ 1.04
SYMPK-212ENST00000598896 STK32CQ86UX6 486 aa21.54■■□□□ 1.04
SYMPK-212ENST00000598896 SVOPLQ8N434 492 aa21.54■■□□□ 1.04
SYMPK-212ENST00000598896 ESX1Q8N693 406 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms