RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 C9JVG2 144 aa12.63□□□□□ -0.39
UPF1-205ENST00000598209 E9PLN8 166 aa12.63□□□□□ -0.39
UPF1-205ENST00000598209 ADAM10O14672 748 aa12.63□□□□□ -0.39
UPF1-205ENST00000598209 UBDO15205 165 aa12.63□□□□□ -0.39
UPF1-205ENST00000598209 FADS1O60427 444 aa12.63□□□□□ -0.39
UPF1-205ENST00000598209 KCNK2O95069 426 aa12.63□□□□□ -0.39
UPF1-205ENST00000598209 UTS2O95399 124 aa12.63□□□□□ -0.39
UPF1-205ENST00000598209 TGDSO95455 350 aa12.63□□□□□ -0.39
UPF1-205ENST00000598209 CPSF4O95639 269 aaKnown RBP12.63□□□□□ -0.39
UPF1-205ENST00000598209 KRT16P08779 473 aa12.63□□□□□ -0.39
UPF1-205ENST00000598209 DGKQP52824 942 aa12.63□□□□□ -0.39
UPF1-205ENST00000598209 POU6F2P78424 691 aaPredicted RBP12.63□□□□□ -0.39
UPF1-205ENST00000598209 ADORA2A-AS1P86434 159 aa12.63□□□□□ -0.39
UPF1-205ENST00000598209 GSTA3Q16772 222 aa12.63□□□□□ -0.39
UPF1-205ENST00000598209 GRAMD1BQ3KR37 738 aa12.63□□□□□ -0.39
UPF1-205ENST00000598209 GXYLT1Q4G148 440 aa12.63□□□□□ -0.39
UPF1-205ENST00000598209 PDCD4Q53EL6 469 aaKnown RBP12.63□□□□□ -0.39
UPF1-205ENST00000598209 EIPR1Q53HC9 387 aa12.63□□□□□ -0.39
UPF1-205ENST00000598209 OR5M10Q6IEU7 315 aa12.63□□□□□ -0.39
UPF1-205ENST00000598209 BHLHB9Q6PI77 547 aa12.63□□□□□ -0.39
UPF1-205ENST00000598209 FIGNL1Q6PIW4 674 aa12.63□□□□□ -0.39
UPF1-205ENST00000598209 NCCRP1Q6ZVX7 275 aaPredicted RBP12.63□□□□□ -0.39
UPF1-205ENST00000598209 ACAD11Q709F0 780 aa12.63□□□□□ -0.39
UPF1-205ENST00000598209 GALNT10Q86SR1 603 aa12.63□□□□□ -0.39
UPF1-205ENST00000598209 PLCZ1Q86YW0 608 aa12.63□□□□□ -0.39
UPF1-205ENST00000598209 FAM83FQ8NEG4 500 aaPredicted RBP12.63□□□□□ -0.39
UPF1-205ENST00000598209 OR5M9Q8NGP3 310 aa12.63□□□□□ -0.39
UPF1-205ENST00000598209 FAM110BQ8TC76 370 aa12.63□□□□□ -0.39
UPF1-205ENST00000598209 ADAMTS15Q8TE58 950 aa12.63□□□□□ -0.39
UPF1-205ENST00000598209 CDS1Q92903 461 aa12.63□□□□□ -0.39
UPF1-205ENST00000598209 ZBTB18Q99592 522 aa12.63□□□□□ -0.39
UPF1-205ENST00000598209 VKORC1Q9BQB6 163 aa12.63□□□□□ -0.39
UPF1-205ENST00000598209 BTBD2Q9BX70 525 aa12.63□□□□□ -0.39
UPF1-205ENST00000598209 TP63Q9H3D4 680 aaPredicted RBP12.63□□□□□ -0.39
UPF1-205ENST00000598209 PIGUQ9H490 435 aa12.63□□□□□ -0.39
UPF1-205ENST00000598209 DUSP22Q9NRW4 184 aa12.63□□□□□ -0.39
UPF1-205ENST00000598209 PNPLA3Q9NST1 481 aa12.63□□□□□ -0.39
UPF1-205ENST00000598209 GPATCH2Q9NW75 528 aa12.63□□□□□ -0.39
UPF1-205ENST00000598209 FAM120CQ9NX05 1096 aaKnown RBP12.63□□□□□ -0.39
UPF1-205ENST00000598209 GIN1Q9NXP7 522 aa12.63□□□□□ -0.39
UPF1-205ENST00000598209 PPP4R1LQ9P1A2 415 aa12.63□□□□□ -0.39
UPF1-205ENST00000598209 ACAD8Q9UKU7 415 aa12.63□□□□□ -0.39
UPF1-205ENST00000598209 USP9YO00507 2555 aaPredicted RBP12.63□□□□□ -0.39
UPF1-205ENST00000598209 C15orf38-AP3S2A0A0A6YYH1 394 aa12.62□□□□□ -0.39
UPF1-205ENST00000598209 RNF103-CHMP3A0A140T963 221 aa12.62□□□□□ -0.39
UPF1-205ENST00000598209 CBR3O75828 277 aa12.62□□□□□ -0.39
UPF1-205ENST00000598209 CLDN1O95832 211 aa12.62□□□□□ -0.39
UPF1-205ENST00000598209 CLK3P49761 638 aaKnown RBP12.62□□□□□ -0.39
UPF1-205ENST00000598209 IDH3AP50213 366 aa12.62□□□□□ -0.39
UPF1-205ENST00000598209 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.62□□□□□ -0.39
UPF1-205ENST00000598209 WIPI1Q5MNZ9 446 aaPredicted RBP12.62□□□□□ -0.39
UPF1-205ENST00000598209 CCNJQ5T5M9 372 aa12.62□□□□□ -0.39
UPF1-205ENST00000598209 WLSQ5T9L3 541 aa12.62□□□□□ -0.39
UPF1-205ENST00000598209 ZNF585AQ6P3V2 769 aa12.62□□□□□ -0.39
UPF1-205ENST00000598209 RPTNQ6XPR3 784 aa12.62□□□□□ -0.39
UPF1-205ENST00000598209 C6orf120Q7Z4R8 191 aa12.62□□□□□ -0.39
UPF1-205ENST00000598209 ZAR1Q86SH2 424 aa12.62□□□□□ -0.39
UPF1-205ENST00000598209 YRDCQ86U90 279 aaKnown RBP12.62□□□□□ -0.39
UPF1-205ENST00000598209 MARCH3Q86UD3 253 aa12.62□□□□□ -0.39
UPF1-205ENST00000598209 CLEC4FQ8N1N0 589 aa12.62□□□□□ -0.39
UPF1-205ENST00000598209 GLB1L3Q8NCI6 653 aaPredicted RBP12.62□□□□□ -0.39
UPF1-205ENST00000598209 PHF10Q8WUB8 498 aaKnown RBP12.62□□□□□ -0.39
UPF1-205ENST00000598209 ITLN2Q8WWU7 325 aaPredicted RBP12.62□□□□□ -0.39
UPF1-205ENST00000598209 OR52E6Q96RD3 313 aa12.62□□□□□ -0.39
UPF1-205ENST00000598209 DMRTA2Q96SC8 542 aa12.62□□□□□ -0.39
UPF1-205ENST00000598209 TBL1XR1Q9BZK7 514 aa12.62□□□□□ -0.39
UPF1-205ENST00000598209 RTN4RQ9BZR6 473 aa12.62□□□□□ -0.39
UPF1-205ENST00000598209 TCF7L2Q9NQB0 619 aa12.62□□□□□ -0.39
UPF1-205ENST00000598209 SDHAF3Q9NRP4 125 aa12.62□□□□□ -0.39
UPF1-205ENST00000598209 FBXO34Q9NWN3 711 aa12.62□□□□□ -0.39
UPF1-205ENST00000598209 PLEKHB1Q9UF11 243 aaPredicted RBP12.62□□□□□ -0.39
UPF1-205ENST00000598209 FBXL2Q9UKC9 423 aa12.62□□□□□ -0.39
UPF1-205ENST00000598209 SLC6A5Q9Y345 797 aa12.62□□□□□ -0.39
UPF1-205ENST00000598209 ASH1LQ9NR48 2969 aaKnown RBP12.61□□□□□ -0.39
UPF1-205ENST00000598209 CACNA1CQ13936 2221 aa12.61□□□□□ -0.39
UPF1-205ENST00000598209 FIGNL2A6NMB9 653 aa12.61□□□□□ -0.39
UPF1-205ENST00000598209 C17orf51A8MQB3 221 aa12.61□□□□□ -0.39
UPF1-205ENST00000598209 POLR3GO15318 223 aaPredicted RBP12.61□□□□□ -0.39
UPF1-205ENST00000598209 SLC22A3O75751 556 aa12.61□□□□□ -0.39
UPF1-205ENST00000598209 SOX30O94993 753 aa12.61□□□□□ -0.39
UPF1-205ENST00000598209 PGRP06401 933 aa12.61□□□□□ -0.39
UPF1-205ENST00000598209 MATN1P21941 496 aa12.61□□□□□ -0.39
UPF1-205ENST00000598209 UQCRC2P22695 453 aa12.61□□□□□ -0.39
UPF1-205ENST00000598209 LCN1P31025 176 aa12.61□□□□□ -0.39
UPF1-205ENST00000598209 SMSP52788 366 aa12.61□□□□□ -0.39
UPF1-205ENST00000598209 RPS26P62854 115 aaKnown RBP12.61□□□□□ -0.39
UPF1-205ENST00000598209 STX5Q13190 355 aa12.61□□□□□ -0.39
UPF1-205ENST00000598209 MAMDC2Q7Z304 686 aaPredicted RBP12.61□□□□□ -0.39
UPF1-205ENST00000598209 MRGPRGQ86SM5 289 aa12.61□□□□□ -0.39
UPF1-205ENST00000598209 ZNF808Q8N4W9 903 aaPredicted RBP12.61□□□□□ -0.39
UPF1-205ENST00000598209 OR4K17Q8NGC6 315 aa12.61□□□□□ -0.39
UPF1-205ENST00000598209 OR5D16Q8NGK9 328 aa12.61□□□□□ -0.39
UPF1-205ENST00000598209 DTNBP1Q96EV8 351 aa12.61□□□□□ -0.39
UPF1-205ENST00000598209 SLC35G5Q96KT7 338 aa12.61□□□□□ -0.39
UPF1-205ENST00000598209 CCDC115Q96NT0 180 aa12.61□□□□□ -0.39
UPF1-205ENST00000598209 OR7D2Q96RA2 312 aa12.61□□□□□ -0.39
UPF1-205ENST00000598209 EBF4Q9BQW3 602 aa12.61□□□□□ -0.39
UPF1-205ENST00000598209 G6PC3Q9BUM1 346 aa12.61□□□□□ -0.39
UPF1-205ENST00000598209 OR2B2Q9GZK3 357 aa12.61□□□□□ -0.39
UPF1-205ENST00000598209 SERHL2Q9H4I8 314 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms