RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 IMPAD1Q9NX62 359 aa15.85■□□□□ 0.13
SHKBP1-216ENST00000598201 SATB2Q9UPW6 733 aa15.85■□□□□ 0.13
SHKBP1-216ENST00000598201 IFT52Q9Y366 437 aa15.85■□□□□ 0.13
SHKBP1-216ENST00000598201 PCDHGA5Q9Y5G8 931 aa15.85■□□□□ 0.13
SHKBP1-216ENST00000598201 HEMK1Q9Y5R4 338 aaPredicted RBP15.85■□□□□ 0.13
SHKBP1-216ENST00000598201 TNRC6BQ9UPQ9 1833 aaKnown RBP15.84■□□□□ 0.13
SHKBP1-216ENST00000598201 A0A087WUU8 490 aa15.84■□□□□ 0.13
SHKBP1-216ENST00000598201 H3BMH7 237 aa15.84■□□□□ 0.13
SHKBP1-216ENST00000598201 PEX12O00623 359 aa15.84■□□□□ 0.13
SHKBP1-216ENST00000598201 HYAL3O43820 417 aaPredicted RBP15.84■□□□□ 0.13
SHKBP1-216ENST00000598201 STX11O75558 287 aa15.84■□□□□ 0.13
SHKBP1-216ENST00000598201 CYP7B1O75881 506 aa15.84■□□□□ 0.13
SHKBP1-216ENST00000598201 THY1P04216 161 aa15.84■□□□□ 0.13
SHKBP1-216ENST00000598201 RPS4Y1P22090 263 aaKnown RBP15.84■□□□□ 0.13
SHKBP1-216ENST00000598201 SSTR4P31391 388 aa15.84■□□□□ 0.13
SHKBP1-216ENST00000598201 RGS8P57771 180 aaPredicted RBP15.84■□□□□ 0.13
SHKBP1-216ENST00000598201 SKP1P63208 163 aa15.84■□□□□ 0.13
SHKBP1-216ENST00000598201 IGLV3-21P80748 117 aaPredicted RBP15.84■□□□□ 0.13
SHKBP1-216ENST00000598201 STX4Q12846 297 aa15.84■□□□□ 0.13
SHKBP1-216ENST00000598201 ZNF155Q12901 538 aaPredicted RBP15.84■□□□□ 0.13
SHKBP1-216ENST00000598201 SNAP47Q5SQN1 464 aa15.84■□□□□ 0.13
SHKBP1-216ENST00000598201 ZAR1Q86SH2 424 aa15.84■□□□□ 0.13
SHKBP1-216ENST00000598201 ERI1Q8IV48 349 aaKnown RBP15.84■□□□□ 0.13
SHKBP1-216ENST00000598201 ZNF595Q8IYB9 648 aa15.84■□□□□ 0.13
SHKBP1-216ENST00000598201 ZNF619Q8N2I2 560 aa15.84■□□□□ 0.13
SHKBP1-216ENST00000598201 SAP130Q9H0E3 1048 aa15.84■□□□□ 0.13
SHKBP1-216ENST00000598201 PLCXD1Q9NUJ7 323 aa15.84■□□□□ 0.13
SHKBP1-216ENST00000598201 KLHL28Q9NXS3 571 aa15.84■□□□□ 0.13
SHKBP1-216ENST00000598201 PSORS1C1Q9UIG5 152 aa15.84■□□□□ 0.13
SHKBP1-216ENST00000598201 CSNK1G3Q9Y6M4 447 aa15.84■□□□□ 0.13
SHKBP1-216ENST00000598201 MAU2Q9Y6X3 613 aa15.84■□□□□ 0.13
SHKBP1-216ENST00000598201 FADS2O95864 444 aaKnown RBP15.83■□□□□ 0.13
SHKBP1-216ENST00000598201 CCNYL3P0C7X3 344 aa15.83■□□□□ 0.13
SHKBP1-216ENST00000598201 CDC42P60953 191 aa15.83■□□□□ 0.13
SHKBP1-216ENST00000598201 MVKQ03426 396 aa15.83■□□□□ 0.13
SHKBP1-216ENST00000598201 LARS2Q15031 903 aaKnown RBP15.83■□□□□ 0.13
SHKBP1-216ENST00000598201 ENTPD8Q5MY95 495 aa15.83■□□□□ 0.13
SHKBP1-216ENST00000598201 OR51Q1Q8NH59 317 aa15.83■□□□□ 0.13
SHKBP1-216ENST00000598201 ZFAND2BQ8WV99 257 aa15.83■□□□□ 0.13
SHKBP1-216ENST00000598201 IPCEF1Q8WWN9 437 aaPredicted RBP15.83■□□□□ 0.13
SHKBP1-216ENST00000598201 HOXB13Q92826 284 aaPredicted RBP15.83■□□□□ 0.13
SHKBP1-216ENST00000598201 RIT1Q92963 219 aa15.83■□□□□ 0.13
SHKBP1-216ENST00000598201 RBM18Q96H35 190 aaKnown RBP15.83■□□□□ 0.13
SHKBP1-216ENST00000598201 ELF4Q99607 663 aaPredicted RBP15.83■□□□□ 0.13
SHKBP1-216ENST00000598201 TRIM45Q9H8W5 580 aaPredicted RBP15.83■□□□□ 0.13
SHKBP1-216ENST00000598201 ZNF232Q9UNY5 417 aa15.83■□□□□ 0.13
SHKBP1-216ENST00000598201 MRPS33Q9Y291 106 aaKnown RBP15.83■□□□□ 0.13
SHKBP1-216ENST00000598201 ZNF99A8MXY4 864 aaPredicted RBP15.83■□□□□ 0.12
SHKBP1-216ENST00000598201 KIAA0513O60268 411 aa15.83■□□□□ 0.12
SHKBP1-216ENST00000598201 NKX2-2O95096 273 aa15.83■□□□□ 0.12
SHKBP1-216ENST00000598201 GLB1P16278 677 aa15.83■□□□□ 0.12
SHKBP1-216ENST00000598201 CD1CP29017 333 aa15.83■□□□□ 0.12
SHKBP1-216ENST00000598201 MPLP40238 635 aa15.83■□□□□ 0.12
SHKBP1-216ENST00000598201 EMDP50402 254 aa15.83■□□□□ 0.12
SHKBP1-216ENST00000598201 CSNK2BP67870 215 aa15.83■□□□□ 0.12
SHKBP1-216ENST00000598201 POU6F2P78424 691 aaPredicted RBP15.83■□□□□ 0.12
SHKBP1-216ENST00000598201 PSG6Q00889 435 aa15.83■□□□□ 0.12
SHKBP1-216ENST00000598201 PRAMEF17Q5VTA0 474 aa15.83■□□□□ 0.12
SHKBP1-216ENST00000598201 C1orf94Q6P1W5 598 aa15.83■□□□□ 0.12
SHKBP1-216ENST00000598201 CCDC81Q6ZN84 652 aa15.83■□□□□ 0.12
SHKBP1-216ENST00000598201 PRSS48Q7RTY5 328 aa15.83■□□□□ 0.12
SHKBP1-216ENST00000598201 CEP76Q8TAP6 659 aa15.83■□□□□ 0.12
SHKBP1-216ENST00000598201 GGHQ92820 318 aa15.83■□□□□ 0.12
SHKBP1-216ENST00000598201 MCHR1Q99705 422 aa15.83■□□□□ 0.12
SHKBP1-216ENST00000598201 CCNB1IP1Q9NPC3 277 aa15.83■□□□□ 0.12
SHKBP1-216ENST00000598201 FKBP14Q9NWM8 211 aa15.83■□□□□ 0.12
SHKBP1-216ENST00000598201 SELENONQ9NZV5 590 aa15.83■□□□□ 0.12
SHKBP1-216ENST00000598201 DTX4Q9Y2E6 619 aa15.83■□□□□ 0.12
SHKBP1-216ENST00000598201 FRYLO94915 3013 aa15.82■□□□□ 0.12
SHKBP1-216ENST00000598201 CACNA1EQ15878 2313 aa15.82■□□□□ 0.12
SHKBP1-216ENST00000598201 TMEM150CB9EJG8 249 aa15.82■□□□□ 0.12
SHKBP1-216ENST00000598201 H3BN98 237 aa15.82■□□□□ 0.12
SHKBP1-216ENST00000598201 BCAS1O75363 584 aaPredicted RBP15.82■□□□□ 0.12
SHKBP1-216ENST00000598201 THBS1P07996 1170 aa15.82■□□□□ 0.12
SHKBP1-216ENST00000598201 PRG2P13727 222 aa15.82■□□□□ 0.12
SHKBP1-216ENST00000598201 TNNI3P19429 210 aa15.82■□□□□ 0.12
SHKBP1-216ENST00000598201 ACVR2AP27037 513 aa15.82■□□□□ 0.12
SHKBP1-216ENST00000598201 C21orf33P30042 268 aaPredicted RBP15.82■□□□□ 0.12
SHKBP1-216ENST00000598201 ZNF136P52737 540 aa15.82■□□□□ 0.12
SHKBP1-216ENST00000598201 GRM7Q14831 915 aa15.82■□□□□ 0.12
SHKBP1-216ENST00000598201 SLX4IPQ5VYV7 408 aa15.82■□□□□ 0.12
SHKBP1-216ENST00000598201 NIPAL1Q6NVV3 410 aa15.82■□□□□ 0.12
SHKBP1-216ENST00000598201 RABEPKQ7Z6M1 372 aa15.82■□□□□ 0.12
SHKBP1-216ENST00000598201 NKAIN4Q8IVV8 208 aa15.82■□□□□ 0.12
SHKBP1-216ENST00000598201 FKBP10Q96AY3 582 aa15.82■□□□□ 0.12
SHKBP1-216ENST00000598201 COPS4Q9BT78 406 aa15.82■□□□□ 0.12
SHKBP1-216ENST00000598201 DCUN1D5Q9BTE7 237 aa15.82■□□□□ 0.12
SHKBP1-216ENST00000598201 FOLH1BQ9HBA9 442 aa15.82■□□□□ 0.12
SHKBP1-216ENST00000598201 GPR83Q9NYM4 423 aa15.82■□□□□ 0.12
SHKBP1-216ENST00000598201 GMEB2Q9UKD1 530 aa15.82■□□□□ 0.12
SHKBP1-216ENST00000598201 UNC13CQ8NB66 2214 aa15.82■□□□□ 0.12
SHKBP1-216ENST00000598201 CLCA1A8K7I4 914 aa15.82■□□□□ 0.12
SHKBP1-216ENST00000598201 CLDN4O14493 209 aa15.82■□□□□ 0.12
SHKBP1-216ENST00000598201 AP3D1O14617 1153 aa15.82■□□□□ 0.12
SHKBP1-216ENST00000598201 DUX1O43812 170 aa15.82■□□□□ 0.12
SHKBP1-216ENST00000598201 BRINP1O60477 761 aa15.82■□□□□ 0.12
SHKBP1-216ENST00000598201 COQ9O75208 318 aa15.82■□□□□ 0.12
SHKBP1-216ENST00000598201 OR2B3O76000 313 aa15.82■□□□□ 0.12
SHKBP1-216ENST00000598201 KCNK2O95069 426 aa15.82■□□□□ 0.12
SHKBP1-216ENST00000598201 CFIP05156 583 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms