RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 KCNK2O95069 426 aa15.24■□□□□ 0.03
SSBP4-204ENST00000597724 UTS2O95399 124 aa15.24■□□□□ 0.03
SSBP4-204ENST00000597724 RFX3P48380 749 aa15.24■□□□□ 0.03
SSBP4-204ENST00000597724 SMSP52788 366 aa15.24■□□□□ 0.03
SSBP4-204ENST00000597724 NME5P56597 212 aa15.24■□□□□ 0.03
SSBP4-204ENST00000597724 TOMM20Q15388 145 aa15.24■□□□□ 0.03
SSBP4-204ENST00000597724 FAM174BQ3ZCQ3 159 aa15.24■□□□□ 0.03
SSBP4-204ENST00000597724 SPANXN4Q5MJ08 99 aa15.24■□□□□ 0.03
SSBP4-204ENST00000597724 WLSQ5T9L3 541 aa15.24■□□□□ 0.03
SSBP4-204ENST00000597724 ANXA8L1Q5VT79 327 aa15.24■□□□□ 0.03
SSBP4-204ENST00000597724 OR5M10Q6IEU7 315 aa15.24■□□□□ 0.03
SSBP4-204ENST00000597724 CDC73Q6P1J9 531 aa15.24■□□□□ 0.03
SSBP4-204ENST00000597724 XKRXQ6PP77 449 aa15.24■□□□□ 0.03
SSBP4-204ENST00000597724 EPGNQ6UW88 154 aa15.24■□□□□ 0.03
SSBP4-204ENST00000597724 ZNF808Q8N4W9 903 aaPredicted RBP15.24■□□□□ 0.03
SSBP4-204ENST00000597724 COX18Q8N8Q8 333 aa15.24■□□□□ 0.03
SSBP4-204ENST00000597724 FAM83FQ8NEG4 500 aaPredicted RBP15.24■□□□□ 0.03
SSBP4-204ENST00000597724 VPS37AQ8NEZ2 397 aa15.24■□□□□ 0.03
SSBP4-204ENST00000597724 OR5AK3PQ8NH89 298 aa15.24■□□□□ 0.03
SSBP4-204ENST00000597724 JADE3Q92613 823 aa15.24■□□□□ 0.03
SSBP4-204ENST00000597724 OTUB1Q96FW1 271 aaPredicted RBP15.24■□□□□ 0.03
SSBP4-204ENST00000597724 STACQ99469 402 aa15.24■□□□□ 0.03
SSBP4-204ENST00000597724 BTBD2Q9BX70 525 aa15.24■□□□□ 0.03
SSBP4-204ENST00000597724 PIGUQ9H490 435 aa15.24■□□□□ 0.03
SSBP4-204ENST00000597724 FBXO34Q9NWN3 711 aa15.24■□□□□ 0.03
SSBP4-204ENST00000597724 ZNF446Q9NWS9 450 aa15.24■□□□□ 0.03
SSBP4-204ENST00000597724 PCDHGB4Q9UN71 923 aa15.24■□□□□ 0.03
SSBP4-204ENST00000597724 CELSR2Q9HCU4 2923 aa15.23■□□□□ 0.03
SSBP4-204ENST00000597724 FIGNL2A6NMB9 653 aa15.23■□□□□ 0.03
SSBP4-204ENST00000597724 C17orf51A8MQB3 221 aa15.23■□□□□ 0.03
SSBP4-204ENST00000597724 B4DXG7 233 aa15.23■□□□□ 0.03
SSBP4-204ENST00000597724 SCO2O43819 266 aa15.23■□□□□ 0.03
SSBP4-204ENST00000597724 SOX30O94993 753 aa15.23■□□□□ 0.03
SSBP4-204ENST00000597724 TGDSO95455 350 aa15.23■□□□□ 0.03
SSBP4-204ENST00000597724 KRT16P08779 473 aa15.23■□□□□ 0.03
SSBP4-204ENST00000597724 IDO1P14902 403 aa15.23■□□□□ 0.03
SSBP4-204ENST00000597724 AGAP20933 346 aa15.23■□□□□ 0.03
SSBP4-204ENST00000597724 ACVR2AP27037 513 aa15.23■□□□□ 0.03
SSBP4-204ENST00000597724 IL12AP29459 219 aa15.23■□□□□ 0.03
SSBP4-204ENST00000597724 S100A3P33764 101 aa15.23■□□□□ 0.03
SSBP4-204ENST00000597724 POU6F2P78424 691 aaPredicted RBP15.23■□□□□ 0.03
SSBP4-204ENST00000597724 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.23■□□□□ 0.03
SSBP4-204ENST00000597724 GRAMD1BQ3KR37 738 aa15.23■□□□□ 0.03
SSBP4-204ENST00000597724 EIPR1Q53HC9 387 aa15.23■□□□□ 0.03
SSBP4-204ENST00000597724 WIPI1Q5MNZ9 446 aaPredicted RBP15.23■□□□□ 0.03
SSBP4-204ENST00000597724 VASNQ6EMK4 673 aa15.23■□□□□ 0.03
SSBP4-204ENST00000597724 TMEM211Q6ICI0 200 aa15.23■□□□□ 0.03
SSBP4-204ENST00000597724 ZNF585AQ6P3V2 769 aa15.23■□□□□ 0.03
SSBP4-204ENST00000597724 BHLHB9Q6PI77 547 aa15.23■□□□□ 0.03
SSBP4-204ENST00000597724 FIGNL1Q6PIW4 674 aa15.23■□□□□ 0.03
SSBP4-204ENST00000597724 GALNT10Q86SR1 603 aa15.23■□□□□ 0.03
SSBP4-204ENST00000597724 YRDCQ86U90 279 aaKnown RBP15.23■□□□□ 0.03
SSBP4-204ENST00000597724 MARCH3Q86UD3 253 aa15.23■□□□□ 0.03
SSBP4-204ENST00000597724 RPRMLQ8N4K4 120 aa15.23■□□□□ 0.03
SSBP4-204ENST00000597724 MARVELD2Q8N4S9 558 aa15.23■□□□□ 0.03
SSBP4-204ENST00000597724 OR4A15Q8NGL6 344 aa15.23■□□□□ 0.03
SSBP4-204ENST00000597724 CKAP2Q8WWK9 683 aa15.23■□□□□ 0.03
SSBP4-204ENST00000597724 CDS1Q92903 461 aa15.23■□□□□ 0.03
SSBP4-204ENST00000597724 CHMP6Q96FZ7 201 aa15.23■□□□□ 0.03
SSBP4-204ENST00000597724 TIMP4Q99727 224 aa15.23■□□□□ 0.03
SSBP4-204ENST00000597724 RTN4RQ9BZR6 473 aa15.23■□□□□ 0.03
SSBP4-204ENST00000597724 OR2B2Q9GZK3 357 aa15.23■□□□□ 0.03
SSBP4-204ENST00000597724 SDHAF3Q9NRP4 125 aa15.23■□□□□ 0.03
SSBP4-204ENST00000597724 FBXL2Q9UKC9 423 aa15.23■□□□□ 0.03
SSBP4-204ENST00000597724 FAF1Q9UNN5 650 aaPredicted RBP15.23■□□□□ 0.03
SSBP4-204ENST00000597724 SLC6A5Q9Y345 797 aa15.23■□□□□ 0.03
SSBP4-204ENST00000597724 MRPS18CQ9Y3D5 142 aaKnown RBP15.23■□□□□ 0.03
SSBP4-204ENST00000597724 PCDHGB3Q9Y5G1 929 aa15.23■□□□□ 0.03
SSBP4-204ENST00000597724 C15orf38-AP3S2A0A0A6YYH1 394 aa15.22■□□□□ 0.03
SSBP4-204ENST00000597724 DIAPH2O60879 1101 aa15.22■□□□□ 0.03
SSBP4-204ENST00000597724 WDR1O75083 606 aa15.22■□□□□ 0.03
SSBP4-204ENST00000597724 CPSF4O95639 269 aaKnown RBP15.22■□□□□ 0.03
SSBP4-204ENST00000597724 TBXA2RP21731 343 aa15.22■□□□□ 0.03
SSBP4-204ENST00000597724 LCN1P31025 176 aa15.22■□□□□ 0.03
SSBP4-204ENST00000597724 SRD5A2P31213 254 aa15.22■□□□□ 0.03
SSBP4-204ENST00000597724 SOAT1P35610 550 aa15.22■□□□□ 0.03
SSBP4-204ENST00000597724 CLK3P49761 638 aaKnown RBP15.22■□□□□ 0.03
SSBP4-204ENST00000597724 DGKQP52824 942 aa15.22■□□□□ 0.03
SSBP4-204ENST00000597724 CRYZQ08257 329 aaKnown RBP15.22■□□□□ 0.03
SSBP4-204ENST00000597724 NHSL2Q5HYW2 709 aa15.22■□□□□ 0.03
SSBP4-204ENST00000597724 RTL6Q6ICC9 239 aa15.22■□□□□ 0.03
SSBP4-204ENST00000597724 APOOLQ6UXV4 268 aa15.22■□□□□ 0.03
SSBP4-204ENST00000597724 C6orf120Q7Z4R8 191 aa15.22■□□□□ 0.03
SSBP4-204ENST00000597724 ZAR1Q86SH2 424 aa15.22■□□□□ 0.03
SSBP4-204ENST00000597724 ANKRD46Q86W74 232 aa15.22■□□□□ 0.03
SSBP4-204ENST00000597724 GLB1L3Q8NCI6 653 aaPredicted RBP15.22■□□□□ 0.03
SSBP4-204ENST00000597724 OR4C3Q8NH37 302 aa15.22■□□□□ 0.03
SSBP4-204ENST00000597724 GOT1L1Q8NHS2 421 aaPredicted RBP15.22■□□□□ 0.03
SSBP4-204ENST00000597724 ADAMTS15Q8TE58 950 aa15.22■□□□□ 0.03
SSBP4-204ENST00000597724 G6PC3Q9BUM1 346 aa15.22■□□□□ 0.03
SSBP4-204ENST00000597724 ACBD3Q9H3P7 528 aa15.22■□□□□ 0.03
SSBP4-204ENST00000597724 PPP4R1LQ9P1A2 415 aa15.22■□□□□ 0.03
SSBP4-204ENST00000597724 KCNE3Q9Y6H6 103 aa15.22■□□□□ 0.03
SSBP4-204ENST00000597724 UNC79Q9P2D8 2635 aa15.21■□□□□ 0.03
SSBP4-204ENST00000597724 PHF3Q92576 2039 aaKnown RBP15.21■□□□□ 0.03
SSBP4-204ENST00000597724 C9JVG2 144 aa15.21■□□□□ 0.03
SSBP4-204ENST00000597724 UBDO15205 165 aa15.21■□□□□ 0.03
SSBP4-204ENST00000597724 SLC22A3O75751 556 aa15.21■□□□□ 0.03
SSBP4-204ENST00000597724 PGRP06401 933 aa15.21■□□□□ 0.03
SSBP4-204ENST00000597724 NGFRP08138 427 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms