RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 TMEM35AQ53FP2 167 aa15.44■□□□□ 0.06
LIG1-206ENST00000594067 ABHD17CQ6PCB6 329 aa15.44■□□□□ 0.06
LIG1-206ENST00000594067 METAP1DQ6UB28 335 aaPredicted RBP15.44■□□□□ 0.06
LIG1-206ENST00000594067 RASSF6Q6ZTQ3 369 aa15.44■□□□□ 0.06
LIG1-206ENST00000594067 C12orf76Q8N812 135 aaPredicted RBP15.44■□□□□ 0.06
LIG1-206ENST00000594067 NUP43Q8NFH3 380 aa15.44■□□□□ 0.06
LIG1-206ENST00000594067 OR56A1Q8NGH5 318 aa15.44■□□□□ 0.06
LIG1-206ENST00000594067 DIO2Q92813 273 aa15.44■□□□□ 0.06
LIG1-206ENST00000594067 KAT2AQ92830 837 aa15.44■□□□□ 0.06
LIG1-206ENST00000594067 SENP5Q96HI0 755 aaPredicted RBP15.44■□□□□ 0.06
LIG1-206ENST00000594067 TMEM43Q9BTV4 400 aa15.44■□□□□ 0.06
LIG1-206ENST00000594067 HDAC8Q9BY41 377 aa15.44■□□□□ 0.06
LIG1-206ENST00000594067 SLC6A20Q9NP91 592 aa15.44■□□□□ 0.06
LIG1-206ENST00000594067 ISYNA1Q9NPH2 558 aa15.44■□□□□ 0.06
LIG1-206ENST00000594067 MCUBQ9NWR8 336 aa15.44■□□□□ 0.06
LIG1-206ENST00000594067 OR52A4PA6NMU1 304 aa15.44■□□□□ 0.06
LIG1-206ENST00000594067 HNRNPA1P09651 372 aaKnown RBP eCLIP15.44■□□□□ 0.06
LIG1-206ENST00000594067 CELP19835 753 aa15.44■□□□□ 0.06
LIG1-206ENST00000594067 WASP42768 502 aa15.44■□□□□ 0.06
LIG1-206ENST00000594067 RRAS2P62070 204 aaPredicted RBP15.44■□□□□ 0.06
LIG1-206ENST00000594067 KRT33BQ14525 404 aa15.44■□□□□ 0.06
LIG1-206ENST00000594067 CREB3L2Q70SY1 520 aa15.44■□□□□ 0.06
LIG1-206ENST00000594067 MARCH9Q86YJ5 346 aa15.44■□□□□ 0.06
LIG1-206ENST00000594067 FAM109AQ8N4B1 249 aa15.44■□□□□ 0.06
LIG1-206ENST00000594067 ZNF485Q8NCK3 441 aa15.44■□□□□ 0.06
LIG1-206ENST00000594067 BBS1Q8NFJ9 593 aa15.44■□□□□ 0.06
LIG1-206ENST00000594067 PIGXQ8TBF5 258 aa15.44■□□□□ 0.06
LIG1-206ENST00000594067 ARHGDIGQ99819 225 aa15.44■□□□□ 0.06
LIG1-206ENST00000594067 ATF6BQ99941 703 aa15.44■□□□□ 0.06
LIG1-206ENST00000594067 SYNPO2LQ9H987 977 aa15.44■□□□□ 0.06
LIG1-206ENST00000594067 CXXC1Q9P0U4 656 aaPredicted RBP15.44■□□□□ 0.06
LIG1-206ENST00000594067 INSL6Q9Y581 213 aa15.44■□□□□ 0.06
LIG1-206ENST00000594067 SHISA3A0PJX4 238 aa15.43■□□□□ 0.06
LIG1-206ENST00000594067 SLC43A1O75387 559 aa15.43■□□□□ 0.06
LIG1-206ENST00000594067 SLC2A10O95528 541 aa15.43■□□□□ 0.06
LIG1-206ENST00000594067 NFATC1O95644 943 aa15.43■□□□□ 0.06
LIG1-206ENST00000594067 ARSBP15848 533 aa15.43■□□□□ 0.06
LIG1-206ENST00000594067 CSNK2A2P19784 350 aaPredicted RBP15.43■□□□□ 0.06
LIG1-206ENST00000594067 TGM3Q08188 693 aa15.43■□□□□ 0.06
LIG1-206ENST00000594067 ST3GAL3Q11203 375 aa15.43■□□□□ 0.06
LIG1-206ENST00000594067 IL18Q14116 193 aa15.43■□□□□ 0.06
LIG1-206ENST00000594067 LTB4RQ15722 352 aa15.43■□□□□ 0.06
LIG1-206ENST00000594067 MRM1Q6IN84 353 aaKnown RBP15.43■□□□□ 0.06
LIG1-206ENST00000594067 FBXL6Q8N531 539 aa15.43■□□□□ 0.06
LIG1-206ENST00000594067 TTLQ8NG68 377 aa15.43■□□□□ 0.06
LIG1-206ENST00000594067 MKRN2Q9H000 416 aaKnown RBP15.43■□□□□ 0.06
LIG1-206ENST00000594067 ACSL5Q9ULC5 683 aa15.43■□□□□ 0.06
LIG1-206ENST00000594067 LOC102723532A0A0G2JNH3 316 aa15.43■□□□□ 0.06
LIG1-206ENST00000594067 TRDV1A0A1B0GX56 115 aa15.43■□□□□ 0.06
LIG1-206ENST00000594067 EMC8O43402 210 aa15.43■□□□□ 0.06
LIG1-206ENST00000594067 PIP5K1CO60331 668 aa15.43■□□□□ 0.06
LIG1-206ENST00000594067 FCMRO60667 390 aa15.43■□□□□ 0.06
LIG1-206ENST00000594067 DRD3P35462 400 aa15.43■□□□□ 0.06
LIG1-206ENST00000594067 PRR5P85299 388 aa15.43■□□□□ 0.06
LIG1-206ENST00000594067 ZNF155Q12901 538 aaPredicted RBP15.43■□□□□ 0.06
LIG1-206ENST00000594067 ZNF767PQ75MW2 155 aa15.43■□□□□ 0.06
LIG1-206ENST00000594067 TRILQ7L0X0 811 aa15.43■□□□□ 0.06
LIG1-206ENST00000594067 C6orf106Q9H6K1 298 aaPredicted RBP15.43■□□□□ 0.06
LIG1-206ENST00000594067 WDR26Q9H7D7 661 aa15.43■□□□□ 0.06
LIG1-206ENST00000594067 STMN3Q9NZ72 180 aa15.43■□□□□ 0.06
LIG1-206ENST00000594067 MOSPD1Q9UJG1 213 aa15.43■□□□□ 0.06
LIG1-206ENST00000594067 CES1P1Q9UKY3 287 aa15.43■□□□□ 0.06
LIG1-206ENST00000594067 LIPT1Q9Y234 373 aa15.43■□□□□ 0.06
LIG1-206ENST00000594067 HSPB11Q9Y547 144 aa15.43■□□□□ 0.06
LIG1-206ENST00000594067 C2orf92A0A1B0GVN3 265 aa15.42■□□□□ 0.06
LIG1-206ENST00000594067 SYT5O00445 386 aa15.42■□□□□ 0.06
LIG1-206ENST00000594067 MID1O15344 667 aa15.42■□□□□ 0.06
LIG1-206ENST00000594067 PLOD3O60568 738 aa15.42■□□□□ 0.06
LIG1-206ENST00000594067 ZIC2O95409 532 aaPredicted RBP15.42■□□□□ 0.06
LIG1-206ENST00000594067 PAK4O96013 591 aaPredicted RBP15.42■□□□□ 0.06
LIG1-206ENST00000594067 F3P13726 295 aa15.42■□□□□ 0.06
LIG1-206ENST00000594067 PKLRP30613 574 aa15.42■□□□□ 0.06
LIG1-206ENST00000594067 RIN1Q13671 783 aa15.42■□□□□ 0.06
LIG1-206ENST00000594067 SLC48A1Q6P1K1 146 aa15.42■□□□□ 0.06
LIG1-206ENST00000594067 PLEKHM3Q6ZWE6 761 aa15.42■□□□□ 0.06
LIG1-206ENST00000594067 C16orf62Q7Z3J2 963 aa15.42■□□□□ 0.06
LIG1-206ENST00000594067 NRMQ8IXM6 262 aa15.42■□□□□ 0.06
LIG1-206ENST00000594067 OR52E1Q8NGJ3 308 aa15.42■□□□□ 0.06
LIG1-206ENST00000594067 RAB7BQ96AH8 199 aa15.42■□□□□ 0.06
LIG1-206ENST00000594067 OTULINQ96BN8 352 aa15.42■□□□□ 0.06
LIG1-206ENST00000594067 GFM1Q96RP9 751 aaKnown RBP15.42■□□□□ 0.06
LIG1-206ENST00000594067 GALNT9Q9HCQ5 603 aa15.42■□□□□ 0.06
LIG1-206ENST00000594067 CSNK1G3Q9Y6M4 447 aa15.42■□□□□ 0.06
LIG1-206ENST00000594067 CD8B2A6NJW9 211 aa15.42■□□□□ 0.06
LIG1-206ENST00000594067 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.42■□□□□ 0.06
LIG1-206ENST00000594067 SURF4O15260 269 aa15.42■□□□□ 0.06
LIG1-206ENST00000594067 CD8BP10966 210 aa15.42■□□□□ 0.06
LIG1-206ENST00000594067 EVI2BP34910 448 aa15.42■□□□□ 0.06
LIG1-206ENST00000594067 FAM78AQ5JUQ0 283 aa15.42■□□□□ 0.06
LIG1-206ENST00000594067 AADACL4Q5VUY2 407 aa15.42■□□□□ 0.06
LIG1-206ENST00000594067 B3GLCTQ6Y288 498 aa15.42■□□□□ 0.06
LIG1-206ENST00000594067 POGLUT1Q8NBL1 392 aa15.42■□□□□ 0.06
LIG1-206ENST00000594067 SPRYD4Q8WW59 207 aaPredicted RBP15.42■□□□□ 0.06
LIG1-206ENST00000594067 ELP4Q96EB1 424 aa15.42■□□□□ 0.06
LIG1-206ENST00000594067 TEX101Q9BY14 249 aa15.42■□□□□ 0.06
LIG1-206ENST00000594067 CDH10Q9Y6N8 788 aa15.42■□□□□ 0.06
LIG1-206ENST00000594067 MYO10Q9HD67 2058 aa15.42■□□□□ 0.06
LIG1-206ENST00000594067 PRR23AA6NEV1 266 aa15.41■□□□□ 0.06
LIG1-206ENST00000594067 ZSCAN5BA6NJL1 495 aa15.41■□□□□ 0.06
LIG1-206ENST00000594067 GABRPO00591 440 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms