RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 ZNF324BQ6AW86 544 aaPredicted RBP13.67□□□□□ -0.22
DDX39A-221ENST00000593026 PIGWQ7Z7B1 504 aa13.67□□□□□ -0.22
DDX39A-221ENST00000593026 ZAR1Q86SH2 424 aa13.67□□□□□ -0.22
DDX39A-221ENST00000593026 DHDDSQ86SQ9 333 aa13.67□□□□□ -0.22
DDX39A-221ENST00000593026 MTDHQ86UE4 582 aaKnown RBP13.67□□□□□ -0.22
DDX39A-221ENST00000593026 RETREG3Q86VR2 466 aa13.67□□□□□ -0.22
DDX39A-221ENST00000593026 SLC22A16Q86VW1 577 aa13.67□□□□□ -0.22
DDX39A-221ENST00000593026 DPP10Q8N608 796 aa13.67□□□□□ -0.22
DDX39A-221ENST00000593026 XAGE5Q8WWM1 108 aa13.67□□□□□ -0.22
DDX39A-221ENST00000593026 MIB2Q96AX9 1013 aa13.67□□□□□ -0.22
DDX39A-221ENST00000593026 TMEM41AQ96HV5 264 aa13.67□□□□□ -0.22
DDX39A-221ENST00000593026 SLX1AQ9BQ83 275 aa13.67□□□□□ -0.22
DDX39A-221ENST00000593026 TSPAN10Q9H1Z9 355 aaPredicted RBP13.67□□□□□ -0.22
DDX39A-221ENST00000593026 ZFP64Q9NPA5 681 aa13.67□□□□□ -0.22
DDX39A-221ENST00000593026 FBXO34Q9NWN3 711 aa13.67□□□□□ -0.22
DDX39A-221ENST00000593026 SLC25A37Q9NYZ2 338 aa13.67□□□□□ -0.22
DDX39A-221ENST00000593026 FLRT3Q9NZU0 649 aa13.67□□□□□ -0.22
DDX39A-221ENST00000593026 SLAMF8Q9P0V8 285 aa13.67□□□□□ -0.22
DDX39A-221ENST00000593026 ABCG2Q9UNQ0 655 aa13.67□□□□□ -0.22
DDX39A-221ENST00000593026 SPENQ96T58 3664 aaKnown RBP13.67□□□□□ -0.22
DDX39A-221ENST00000593026 LRRC3CA6NJW4 275 aa13.66□□□□□ -0.22
DDX39A-221ENST00000593026 BBIP1A8MTZ0 92 aa13.66□□□□□ -0.22
DDX39A-221ENST00000593026 NPIPA5E9PKD4 350 aa13.66□□□□□ -0.22
DDX39A-221ENST00000593026 HMGN4O00479 90 aa13.66□□□□□ -0.22
DDX39A-221ENST00000593026 SCO2O43819 266 aa13.66□□□□□ -0.22
DDX39A-221ENST00000593026 FADS1O60427 444 aa13.66□□□□□ -0.22
DDX39A-221ENST00000593026 GLSO94925 669 aaPredicted RBP13.66□□□□□ -0.22
DDX39A-221ENST00000593026 FAM107AO95990 144 aa13.66□□□□□ -0.22
DDX39A-221ENST00000593026 HPGDP15428 266 aa13.66□□□□□ -0.22
DDX39A-221ENST00000593026 PPIBP23284 216 aaKnown RBP13.66□□□□□ -0.22
DDX39A-221ENST00000593026 MST1P26927 711 aa13.66□□□□□ -0.22
DDX39A-221ENST00000593026 CRATP43155 626 aa13.66□□□□□ -0.22
DDX39A-221ENST00000593026 MVDP53602 400 aa13.66□□□□□ -0.22
DDX39A-221ENST00000593026 PPIAP62937 165 aaKnown RBP13.66□□□□□ -0.22
DDX39A-221ENST00000593026 NFYCQ13952 458 aa13.66□□□□□ -0.22
DDX39A-221ENST00000593026 CYLC2Q14093 348 aaPredicted RBP13.66□□□□□ -0.22
DDX39A-221ENST00000593026 GRAMD1BQ3KR37 738 aa13.66□□□□□ -0.22
DDX39A-221ENST00000593026 MMEL1Q495T6 779 aa13.66□□□□□ -0.22
DDX39A-221ENST00000593026 HEPHL1Q6MZM0 1159 aa13.66□□□□□ -0.22
DDX39A-221ENST00000593026 SNX32Q86XE0 403 aa13.66□□□□□ -0.22
DDX39A-221ENST00000593026 MSRB3Q8IXL7 192 aa13.66□□□□□ -0.22
DDX39A-221ENST00000593026 CHDHQ8NE62 594 aaPredicted RBP13.66□□□□□ -0.22
DDX39A-221ENST00000593026 OR52N2Q8NGI0 321 aa13.66□□□□□ -0.22
DDX39A-221ENST00000593026 OR4C3Q8NH37 302 aa13.66□□□□□ -0.22
DDX39A-221ENST00000593026 RNF138Q8WVD3 245 aa13.66□□□□□ -0.22
DDX39A-221ENST00000593026 NTNG2Q96CW9 530 aa13.66□□□□□ -0.22
DDX39A-221ENST00000593026 CCT8L2Q96SF2 557 aa13.66□□□□□ -0.22
DDX39A-221ENST00000593026 SDF2Q99470 211 aa13.66□□□□□ -0.22
DDX39A-221ENST00000593026 TBL1XR1Q9BZK7 514 aa13.66□□□□□ -0.22
DDX39A-221ENST00000593026 RAD21L1Q9H4I0 556 aa13.66□□□□□ -0.22
DDX39A-221ENST00000593026 VAPAQ9P0L0 249 aa13.66□□□□□ -0.22
DDX39A-221ENST00000593026 B4GALT7Q9UBV7 327 aa13.66□□□□□ -0.22
DDX39A-221ENST00000593026 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.66□□□□□ -0.22
DDX39A-221ENST00000593026 NPIPA1Q9UND3 350 aa13.66□□□□□ -0.22
DDX39A-221ENST00000593026 ARL2BPQ9Y2Y0 163 aa13.66□□□□□ -0.22
DDX39A-221ENST00000593026 WIF1Q9Y5W5 379 aa13.66□□□□□ -0.22
DDX39A-221ENST00000593026 TRBV5-3A0A0A0MS03 114 aa13.65□□□□□ -0.22
DDX39A-221ENST00000593026 LOC100653049A0A140TA62 436 aa13.65□□□□□ -0.22
DDX39A-221ENST00000593026 C2orf72A6NCS6 295 aa13.65□□□□□ -0.22
DDX39A-221ENST00000593026 FBP2O00757 339 aa13.65□□□□□ -0.22
DDX39A-221ENST00000593026 SCDO00767 359 aa13.65□□□□□ -0.22
DDX39A-221ENST00000593026 GNB5O14775 395 aa13.65□□□□□ -0.22
DDX39A-221ENST00000593026 SNPHO15079 494 aa13.65□□□□□ -0.22
DDX39A-221ENST00000593026 STX11O75558 287 aa13.65□□□□□ -0.22
DDX39A-221ENST00000593026 KRT34O76011 436 aa13.65□□□□□ -0.22
DDX39A-221ENST00000593026 UNC5CO95185 931 aa13.65□□□□□ -0.22
DDX39A-221ENST00000593026 OXSR1O95747 527 aaPredicted RBP13.65□□□□□ -0.22
DDX39A-221ENST00000593026 NGFRP08138 427 aa13.65□□□□□ -0.22
DDX39A-221ENST00000593026 ETFAP13804 333 aa13.65□□□□□ -0.22
DDX39A-221ENST00000593026 ELAVL4P26378 380 aaKnown RBP13.65□□□□□ -0.22
DDX39A-221ENST00000593026 TDGF1P3P51864 188 aa13.65□□□□□ -0.22
DDX39A-221ENST00000593026 HPCAP84074 193 aa13.65□□□□□ -0.22
DDX39A-221ENST00000593026 FOXK1P85037 733 aa13.65□□□□□ -0.22
DDX39A-221ENST00000593026 IGFBP7Q16270 282 aa13.65□□□□□ -0.22
DDX39A-221ENST00000593026 HYAL4Q2M3T9 481 aa13.65□□□□□ -0.22
DDX39A-221ENST00000593026 ARHGAP11BQ3KRB8 267 aa13.65□□□□□ -0.22
DDX39A-221ENST00000593026 FLYWCH1Q4VC44 716 aa13.65□□□□□ -0.22
DDX39A-221ENST00000593026 DLEU7Q6UYE1 221 aa13.65□□□□□ -0.22
DDX39A-221ENST00000593026 ATCAYQ86WG3 371 aa13.65□□□□□ -0.22
DDX39A-221ENST00000593026 SIAH3Q8IW03 269 aa13.65□□□□□ -0.22
DDX39A-221ENST00000593026 FAM109AQ8N4B1 249 aa13.65□□□□□ -0.22
DDX39A-221ENST00000593026 TMEM251Q8N6I4 163 aa13.65□□□□□ -0.22
DDX39A-221ENST00000593026 ZNF527Q8NB42 609 aa13.65□□□□□ -0.22
DDX39A-221ENST00000593026 OR1J4Q8NGS1 313 aa13.65□□□□□ -0.22
DDX39A-221ENST00000593026 ROPN1LQ96C74 230 aa13.65□□□□□ -0.22
DDX39A-221ENST00000593026 ZNF703Q9H7S9 590 aaPredicted RBP13.65□□□□□ -0.22
DDX39A-221ENST00000593026 UBQLN4Q9NRR5 601 aa13.65□□□□□ -0.22
DDX39A-221ENST00000593026 LIPT1Q9Y234 373 aa13.65□□□□□ -0.22
DDX39A-221ENST00000593026 ZNF462Q96JM2 2506 aa13.65□□□□□ -0.22
DDX39A-221ENST00000593026 ALG1L2C9J202 215 aa13.64□□□□□ -0.23
DDX39A-221ENST00000593026 MRASO14807 208 aa13.64□□□□□ -0.23
DDX39A-221ENST00000593026 RFPL3SP0C7P2 107 aa13.64□□□□□ -0.23
DDX39A-221ENST00000593026 EDN3P14138 238 aa13.64□□□□□ -0.23
DDX39A-221ENST00000593026 TBXA2RP21731 343 aa13.64□□□□□ -0.23
DDX39A-221ENST00000593026 MAGEA5P43359 124 aa13.64□□□□□ -0.23
DDX39A-221ENST00000593026 GAS1P54826 345 aa13.64□□□□□ -0.23
DDX39A-221ENST00000593026 DSTNP60981 165 aa13.64□□□□□ -0.23
DDX39A-221ENST00000593026 FUT5Q11128 374 aa13.64□□□□□ -0.23
DDX39A-221ENST00000593026 FADDQ13158 208 aa13.64□□□□□ -0.23
DDX39A-221ENST00000593026 STX5Q13190 355 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms