RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 SH2D4BQ5SQS7 431 aa12□□□□□ -0.49
APOC1-209ENST00000592885 RAET1LQ5VY80 246 aa12□□□□□ -0.49
APOC1-209ENST00000592885 LUZP2Q86TE4 346 aa12□□□□□ -0.49
APOC1-209ENST00000592885 GCNT2Q8N0V5 402 aa12□□□□□ -0.49
APOC1-209ENST00000592885 CCDC63Q8NA47 563 aa12□□□□□ -0.49
APOC1-209ENST00000592885 LINC01560Q8TB33 94 aa12□□□□□ -0.49
APOC1-209ENST00000592885 PIGQQ9BRB3 760 aa12□□□□□ -0.49
APOC1-209ENST00000592885 LIME1Q9H400 295 aa12□□□□□ -0.49
APOC1-209ENST00000592885 DSN1Q9H410 356 aa12□□□□□ -0.49
APOC1-209ENST00000592885 LRTM1Q9HBL6 345 aa12□□□□□ -0.49
APOC1-209ENST00000592885 C1orf109Q9NX04 203 aa12□□□□□ -0.49
APOC1-209ENST00000592885 MKS1Q9NXB0 559 aa12□□□□□ -0.49
APOC1-209ENST00000592885 NDRG3Q9UGV2 375 aa12□□□□□ -0.49
APOC1-209ENST00000592885 RPH3AQ9Y2J0 694 aaPredicted RBP12□□□□□ -0.49
APOC1-209ENST00000592885 TMED5Q9Y3A6 229 aa12□□□□□ -0.49
APOC1-209ENST00000592885 HRNRQ86YZ3 2850 aaPredicted RBP12□□□□□ -0.49
APOC1-209ENST00000592885 AKAP6Q13023 2319 aa11.99□□□□□ -0.49
APOC1-209ENST00000592885 MTORP42345 2549 aa11.99□□□□□ -0.49
APOC1-209ENST00000592885 AZIN1O14977 448 aa11.99□□□□□ -0.49
APOC1-209ENST00000592885 SEC22BO75396 215 aa11.99□□□□□ -0.49
APOC1-209ENST00000592885 TNFRSF21O75509 655 aa11.99□□□□□ -0.49
APOC1-209ENST00000592885 ATE1O95260 518 aa11.99□□□□□ -0.49
APOC1-209ENST00000592885 HRGP04196 525 aa11.99□□□□□ -0.49
APOC1-209ENST00000592885 NGFRP08138 427 aa11.99□□□□□ -0.49
APOC1-209ENST00000592885 PRPS2P11908 318 aa11.99□□□□□ -0.49
APOC1-209ENST00000592885 FCGR2AP12318 317 aa11.99□□□□□ -0.49
APOC1-209ENST00000592885 LCN1P31025 176 aa11.99□□□□□ -0.49
APOC1-209ENST00000592885 FRKP42685 505 aaPredicted RBP11.99□□□□□ -0.49
APOC1-209ENST00000592885 PRR5P85299 388 aa11.99□□□□□ -0.49
APOC1-209ENST00000592885 C17orf67Q0P5P2 114 aa11.99□□□□□ -0.49
APOC1-209ENST00000592885 KRTAP21-3Q3LHN1 58 aa11.99□□□□□ -0.49
APOC1-209ENST00000592885 GSPT2Q8IYD1 628 aaKnown RBP11.99□□□□□ -0.49
APOC1-209ENST00000592885 CEP70Q8NHQ1 597 aa11.99□□□□□ -0.49
APOC1-209ENST00000592885 UBLCP1Q8WVY7 318 aaPredicted RBP11.99□□□□□ -0.49
APOC1-209ENST00000592885 MTERF3Q96E29 417 aa11.99□□□□□ -0.49
APOC1-209ENST00000592885 C1GALT1C1Q96EU7 318 aa11.99□□□□□ -0.49
APOC1-209ENST00000592885 ZBED6CLQ96FA7 236 aaPredicted RBP11.99□□□□□ -0.49
APOC1-209ENST00000592885 TBL1XR1Q9BZK7 514 aa11.99□□□□□ -0.49
APOC1-209ENST00000592885 PLEKHF2Q9H8W4 249 aa11.99□□□□□ -0.49
APOC1-209ENST00000592885 STOML1Q9UBI4 398 aa11.99□□□□□ -0.49
APOC1-209ENST00000592885 TESMINQ9Y4I5 508 aa11.99□□□□□ -0.49
APOC1-209ENST00000592885 AP4B1Q9Y6B7 739 aa11.99□□□□□ -0.49
APOC1-209ENST00000592885 OR2M5A3KFT3 312 aa11.98□□□□□ -0.49
APOC1-209ENST00000592885 CASKO14936 926 aa11.98□□□□□ -0.49
APOC1-209ENST00000592885 NKX2-2O95096 273 aa11.98□□□□□ -0.49
APOC1-209ENST00000592885 UTS2O95399 124 aa11.98□□□□□ -0.49
APOC1-209ENST00000592885 TGM6O95932 706 aa11.98□□□□□ -0.49
APOC1-209ENST00000592885 SHBGP04278 402 aa11.98□□□□□ -0.49
APOC1-209ENST00000592885 FOSL1P15407 271 aa11.98□□□□□ -0.49
APOC1-209ENST00000592885 ZNF17P17021 662 aa11.98□□□□□ -0.49
APOC1-209ENST00000592885 KRT4P19013 534 aa11.98□□□□□ -0.49
APOC1-209ENST00000592885 KLK2P20151 261 aa11.98□□□□□ -0.49
APOC1-209ENST00000592885 CPOXP36551 454 aa11.98□□□□□ -0.49
APOC1-209ENST00000592885 MAP3K8P41279 467 aa11.98□□□□□ -0.49
APOC1-209ENST00000592885 ASMTP46597 345 aa11.98□□□□□ -0.49
APOC1-209ENST00000592885 RPS3AP61247 264 aaKnown RBP11.98□□□□□ -0.49
APOC1-209ENST00000592885 SLC18A2Q05940 514 aa11.98□□□□□ -0.49
APOC1-209ENST00000592885 HSPB3Q12988 150 aa11.98□□□□□ -0.49
APOC1-209ENST00000592885 PDE7AQ13946 482 aa11.98□□□□□ -0.49
APOC1-209ENST00000592885 KEAP1Q14145 624 aa11.98□□□□□ -0.49
APOC1-209ENST00000592885 DEFB113Q30KQ7 82 aa11.98□□□□□ -0.49
APOC1-209ENST00000592885 KANK2Q63ZY3 851 aa11.98□□□□□ -0.49
APOC1-209ENST00000592885 UBQLNLQ8IYU4 475 aa11.98□□□□□ -0.49
APOC1-209ENST00000592885 RIBC1Q8N443 379 aaPredicted RBP11.98□□□□□ -0.49
APOC1-209ENST00000592885 METTL25Q8N6Q8 603 aa11.98□□□□□ -0.49
APOC1-209ENST00000592885 CDRT4Q8N9R6 151 aa11.98□□□□□ -0.49
APOC1-209ENST00000592885 GFM2Q969S9 779 aaKnown RBP11.98□□□□□ -0.49
APOC1-209ENST00000592885 PPCDCQ96CD2 204 aa11.98□□□□□ -0.49
APOC1-209ENST00000592885 EGLN2Q96KS0 407 aa11.98□□□□□ -0.49
APOC1-209ENST00000592885 MS4A4EQ96PG1 132 aa11.98□□□□□ -0.49
APOC1-209ENST00000592885 REEP4Q9H6H4 257 aa11.98□□□□□ -0.49
APOC1-209ENST00000592885 RNF122Q9H9V4 155 aa11.98□□□□□ -0.49
APOC1-209ENST00000592885 TNFRSF12AQ9NP84 129 aa11.98□□□□□ -0.49
APOC1-209ENST00000592885 ACSS1Q9NUB1 689 aaPredicted RBP11.98□□□□□ -0.49
APOC1-209ENST00000592885 PAQR5Q9NXK6 330 aaPredicted RBP11.98□□□□□ -0.49
APOC1-209ENST00000592885 ELOVL5Q9NYP7 299 aa11.98□□□□□ -0.49
APOC1-209ENST00000592885 FLRT3Q9NZU0 649 aa11.98□□□□□ -0.49
APOC1-209ENST00000592885 MED11Q9P086 117 aa11.98□□□□□ -0.49
APOC1-209ENST00000592885 NTMQ9P121 344 aa11.98□□□□□ -0.49
APOC1-209ENST00000592885 EIF3LQ9Y262 564 aaKnown RBP11.98□□□□□ -0.49
APOC1-209ENST00000592885 MPDZO75970 2070 aa11.98□□□□□ -0.49
APOC1-209ENST00000592885 A0A087WZY1 265 aa11.97□□□□□ -0.49
APOC1-209ENST00000592885 ALG1L2C9J202 215 aa11.97□□□□□ -0.49
APOC1-209ENST00000592885 EMC8O43402 210 aa11.97□□□□□ -0.49
APOC1-209ENST00000592885 TRIM13O60858 407 aa11.97□□□□□ -0.49
APOC1-209ENST00000592885 HSPA4LO95757 839 aa11.97□□□□□ -0.49
APOC1-209ENST00000592885 ANGPTL1O95841 491 aa11.97□□□□□ -0.49
APOC1-209ENST00000592885 CD8BP10966 210 aa11.97□□□□□ -0.49
APOC1-209ENST00000592885 SDC1P18827 310 aa11.97□□□□□ -0.49
APOC1-209ENST00000592885 TCEA1P23193 301 aaKnown RBP11.97□□□□□ -0.49
APOC1-209ENST00000592885 GABRA3P34903 492 aa11.97□□□□□ -0.49
APOC1-209ENST00000592885 GPC1P35052 558 aa11.97□□□□□ -0.49
APOC1-209ENST00000592885 RPL3P39023 403 aaKnown RBP11.97□□□□□ -0.49
APOC1-209ENST00000592885 CD79BP40259 229 aa11.97□□□□□ -0.49
APOC1-209ENST00000592885 RPL38P63173 70 aaKnown RBP11.97□□□□□ -0.49
APOC1-209ENST00000592885 STX5Q13190 355 aa11.97□□□□□ -0.49
APOC1-209ENST00000592885 PCLAFQ15004 111 aa11.97□□□□□ -0.49
APOC1-209ENST00000592885 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.97□□□□□ -0.49
APOC1-209ENST00000592885 TMEM44Q2T9K0 475 aa11.97□□□□□ -0.49
APOC1-209ENST00000592885 CLEC6AQ6EIG7 209 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms